Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 5.6e-37 157.1 82 100.0
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 4.8e-36 154.1 82 97.6
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 1.3e-33 146.0 82 90.2
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 3.8e-33 144.4 82 89.0
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.9e-32 142.1 82 87.8
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 1.9e-29 132.1 82 85.4
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 1.4e-24 115.9 75 74.7
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.4e-24 115.2 73 78.1
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.4e-24 115.2 73 78.1
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 2.4e-24 115.2 73 79.5
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 3.2e-24 114.8 73 78.1
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 5.4e-24 114.0 74 77.0
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 1.6e-23 112.5 74 74.3
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 1.6e-23 112.5 72 76.4
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.6e-23 112.5 75 73.3
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 2.7e-23 111.7 72 73.6
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 2.7e-23 111.7 73 72.6
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 3.5e-23 111.3 75 73.3
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 4.6e-23 110.9 73 76.7
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 6.0e-23 110.5 74 73.0
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 7.9e-23 110.2 74 73.0
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 1.3e-22 109.4 73 76.7
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.8e-22 109.0 74 74.3
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 1.8e-22 109.0 73 69.9
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 1.8e-22 109.0 73 72.6
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 2.3e-22 108.6 72 73.6
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 3.0e-22 108.2 73 75.3
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 3.0e-22 108.2 73 72.6
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 3.0e-22 108.2 73 72.6
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 3.9e-22 107.8 77 70.1
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 5.1e-22 107.5 73 69.9
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 5.1e-22 107.5 73 69.9
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.1e-22 107.5 73 72.6
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 5.1e-22 107.5 73 72.6
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 5.1e-22 107.5 73 72.6
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 5.1e-22 107.5 72 73.6
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 6.7e-22 107.1 73 69.9
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 6.7e-22 107.1 73 69.9
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 6.7e-22 107.1 75 69.3
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 6.7e-22 107.1 73 72.6
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 6.7e-22 107.1 73 69.9
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 6.7e-22 107.1 72 72.2
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 8.7e-22 106.7 66 78.8
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 8.7e-22 106.7 73 72.6
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 1.1e-21 106.3 73 71.2
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.1e-21 106.3 74 68.9
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 1.1e-21 106.3 73 71.2
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 1.1e-21 106.3 72 70.8
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 1.5e-21 105.9 73 68.5
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 1.5e-21 105.9 73 68.5
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 1.5e-21 105.9 73 68.5
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.5e-21 105.9 73 71.2
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 1.5e-21 105.9 73 72.6
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.5e-21 105.9 74 66.2
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 1.9e-21 105.5 73 69.9
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 1.9e-21 105.5 73 68.5
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.5e-21 105.1 73 69.9
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 3.3e-21 104.8 73 71.2
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 3.3e-21 104.8 73 69.9
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 4.3e-21 104.4 73 69.9
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 4.3e-21 104.4 73 69.9
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 4.3e-21 104.4 74 66.2
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 5.6e-21 104.0 72 66.7
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 5.6e-21 104.0 72 66.7
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 5.6e-21 104.0 73 68.5
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 5.6e-21 104.0 73 68.5
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 7.4e-21 103.6 73 69.9
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 7.4e-21 103.6 73 69.9
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 7.4e-21 103.6 73 72.6
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 1.3e-20 102.8 73 69.9
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 1.3e-20 102.8 72 69.4
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 1.6e-20 102.4 73 69.9
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 2.8e-20 101.7 73 69.9
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 2.8e-20 101.7 73 69.9
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 3.7e-20 101.3 73 65.8
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 3.7e-20 101.3 73 64.4
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 4.8e-20 100.9 73 68.5
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 4.8e-20 100.9 73 67.1
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 8.1e-20 100.1 76 63.2
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 8.1e-20 100.1 73 67.1
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 8.1e-20 100.1 73 67.1
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 8.1e-20 100.1 73 67.1
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 1.1e-19 99.8 76 63.2
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 1.4e-19 99.4 72 66.7
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 1.4e-19 99.4 73 63.0
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 1.4e-19 99.4 77 66.2
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 4.0e-19 97.8 73 65.8
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 5.3e-19 97.4 74 63.5
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 6.9e-19 97.1 74 63.5
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 6.9e-19 97.1 72 65.3
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 1.2e-18 96.3 72 65.3
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 1.5e-18 95.9 75 64.0
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 2.6e-18 95.1 73 64.4
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 5.8e-18 94.0 74 64.9
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.0e-17 93.2 73 64.4
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 1.3e-17 92.8 69 68.1
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 1.3e-17 92.8 74 63.5
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 2.9e-17 91.7 74 60.8
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 4.9e-17 90.9 67 65.7
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 6.5e-17 90.5 74 63.5
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 8.4e-17 90.1 74 60.8
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 9.3e-16 86.7 103 49.5
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 1.2e-15 86.3 74 60.8
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 1.6e-15 85.9 72 58.3
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 1.6e-15 85.9 43 97.7
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 3.5e-15 84.7 116 42.2
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 6.0e-15 84.0 75 56.0
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 1.0e-14 83.2 66 63.6
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 1.9e-13 79.0 68 51.5
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 8.2e-12 73.6 45 75.6
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 1.1e-11 73.2 47 76.6
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 1.8e-11 72.4 68 50.0
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 9.0e-11 70.1 43 74.4
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 1.2e-10 69.7 43 76.7
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 3.8e-09 64.7 58 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 2.5e-08 62.0 62 46.8
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 1.2e-07 59.7 41 70.7
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 7.9e-07 57.0 41 65.9
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 2.3e-06 55.5 66 45.5


User provided reference genes

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