Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 0.0e+00 1364.7 713 100.0
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 0.0e+00 1283.5 713 93.7
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 0.0e+00 1230.3 715 90.2
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.8e-208 729.9 739 60.4
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 6.9e-200 701.4 738 59.2
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.9e-173 613.6 602 62.1
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.1e-32 146.0 784 27.4
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 1.3e-25 122.5 468 30.1
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 6.6e-25 120.2 761 28.0
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 8.6e-25 119.8 346 30.1
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 1.9e-24 118.6 135 49.6
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 9.5e-24 116.3 827 25.5
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 9.5e-24 116.3 796 24.5
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 6.8e-22 110.2 793 26.0
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 4.4e-21 107.5 346 32.1
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 9.9e-21 106.3 151 45.0
Nitab4.5_0002118g0030 Nicotiana tabacum HOM05D014400 ORTHO05D010081 2.9e-20 104.8 130 50.0
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 1.4e-19 102.4 613 24.8
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 2.1e-18 98.6 603 26.0
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 3.0e-17 94.7 479 25.5
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 4.3e-16 90.9 599 24.7
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 1.6e-15 89.0 820 24.4
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 6.2e-15 87.0 560 25.0
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 2.4e-14 85.1 255 32.9
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 4.0e-14 84.3 664 24.5
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 5.2e-14 84.0 503 28.2
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 4.4e-13 80.9 181 37.0
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 1.7e-12 79.0 783 25.5
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 2.2e-12 78.6 756 24.7
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 8.4e-12 76.6 575 24.7
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 1.4e-11 75.9 217 30.9
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 3.2e-11 74.7 235 34.9
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 4.2e-11 74.3 679 23.6
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 9.3e-11 73.2 772 24.4
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 4.6e-10 70.9 777 23.2
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 7.8e-10 70.1 778 23.1
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 3.9e-09 67.8 465 24.1
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 3.9e-09 67.8 415 26.0
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.9e-08 65.5 767 23.7
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.9e-08 65.5 767 23.7
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 3.3e-08 64.7 734 23.2
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 3.3e-08 64.7 169 30.8
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 5.6e-08 63.9 394 24.1
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 7.3e-08 63.5 798 22.4
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 9.6e-08 63.2 388 25.8
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 1.3e-07 62.8 775 23.1
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 2.1e-07 62.0 117 35.0
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 1.4e-06 59.3 767 24.0
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 4.0e-06 57.8 85 48.2


User provided reference genes

Program Settings