Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 1.6e-113 412.9 237 100.0
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 9.3e-109 397.1 237 97.0
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.0e-58 229.9 214 67.3
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 3.8e-54 215.7 155 71.6
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 3.3e-53 212.6 232 57.3
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 3.1e-35 152.9 153 59.5
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 1.6e-31 140.6 130 55.4
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 1.3e-30 137.5 129 52.7
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.1e-28 130.2 145 49.7
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.1e-28 130.2 145 49.7
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 4.7e-28 129.0 237 38.0
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 8.1e-28 128.3 123 51.2
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.4e-27 127.5 122 50.8
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 4.0e-27 125.9 94 62.8
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 8.9e-27 124.8 104 53.8
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 1.5e-26 124.0 128 49.2
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 2.0e-26 123.6 146 45.2
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 2.6e-26 123.2 153 43.1
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 4.4e-26 122.5 134 49.3
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 5.8e-26 122.1 153 41.8
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.3e-25 120.9 132 45.5
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.7e-25 120.6 153 41.8
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 3.7e-25 119.4 114 51.8
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 1.6e-23 114.0 100 52.0
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 2.7e-23 113.2 102 54.9
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 3.5e-23 112.8 167 42.5
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 1.3e-22 110.9 100 50.0
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 3.0e-22 109.8 149 42.3
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 6.6e-22 108.6 125 44.8
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 1.1e-21 107.8 137 40.9
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 1.5e-21 107.5 117 44.4
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 1.9e-21 107.1 97 53.6
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 1.9e-21 107.1 177 36.7
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 7.3e-21 105.1 116 47.4
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 9.6e-21 104.8 113 47.8
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 2.1e-20 103.6 179 36.9
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.1e-20 103.6 138 41.3
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.1e-20 103.6 132 44.7
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 2.1e-20 103.6 132 44.7
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 2.8e-20 103.2 112 46.4
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 4.7e-20 102.4 131 45.8
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 4.7e-20 102.4 131 45.8
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 6.2e-20 102.1 182 36.3
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 8.1e-20 101.7 144 40.3
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 8.1e-20 101.7 136 38.2
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 8.1e-20 101.7 112 48.2
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 8.1e-20 101.7 112 48.2
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 8.1e-20 101.7 140 42.1
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 1.4e-19 100.9 113 45.1
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 1.8e-19 100.5 139 40.3
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 2.4e-19 100.1 140 41.4
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 2.4e-19 100.1 116 48.3
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 3.1e-19 99.8 105 49.5
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 3.1e-19 99.8 139 40.3
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 4.0e-19 99.4 135 43.0
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 4.0e-19 99.4 135 43.0
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 4.0e-19 99.4 97 47.4
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 5.2e-19 99.0 136 41.9
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 5.2e-19 99.0 101 45.5
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 8.9e-19 98.2 139 39.6
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 8.9e-19 98.2 125 44.8
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 1.2e-18 97.8 103 49.5
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 1.5e-18 97.4 139 39.6
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 2.0e-18 97.1 100 45.0
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 7.6e-18 95.1 138 38.4
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 7.6e-18 95.1 138 38.4
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 7.6e-18 95.1 100 45.0
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 9.9e-18 94.7 135 43.0
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 9.9e-18 94.7 114 43.0
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 1.3e-17 94.4 140 39.3
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 1.3e-17 94.4 127 40.9
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 1.3e-17 94.4 127 40.2
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 1.7e-17 94.0 134 35.8
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 1.7e-17 94.0 97 47.4
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 1.7e-17 94.0 112 43.8
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 2.2e-17 93.6 137 38.7
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 3.8e-17 92.8 105 42.9
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 1.9e-16 90.5 105 42.9
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 4.2e-16 89.4 150 39.3
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 4.2e-16 89.4 97 46.4
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 5.4e-16 89.0 105 41.9
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 9.3e-16 88.2 121 40.5
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 9.3e-16 88.2 101 41.6
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 1.6e-15 87.4 112 42.0
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 4.6e-15 85.9 117 36.8
Peaxi162Scf00092g00337 Petunia axillaris HOM05D007411 ORTHO05D009025 7.8e-15 85.1 111 47.7
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 1.0e-14 84.7 128 36.7
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 1.3e-14 84.3 134 38.8
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 3.9e-14 82.8 98 43.9
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 6.6e-14 82.0 85 48.2
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 1.9e-13 80.5 87 44.8
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 2.5e-13 80.1 94 43.6
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 4.3e-13 79.3 154 35.1
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 2.4e-11 73.6 106 39.6
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 1.2e-10 71.2 98 39.8
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 3.4e-10 69.7 89 40.4
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 5.8e-10 68.9 83 37.3
FvH4_3g08061 Fragaria vesca HOM05D007411 ORTHO05D009025 3.2e-08 63.2 66 48.5
FvH4_3g16330 Fragaria vesca HOM05D018240 ORTHO05D025480 5.1e-06 55.8 54 46.3


User provided reference genes

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