Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g076053.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.9e-60 233.8 120 100.0
Solyc02g014876.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.4e-36 155.6 118 66.9
Solyc07g049805.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.5e-35 152.9 119 63.0
Solyc04g011333.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.6e-32 141.7 118 62.7
Sopen07g014500 Solanum pennellii HOM05D005671 ORTHO05D004497 1.7e-29 132.9 117 59.8
Sopen00g011000 Solanum pennellii HOM05D005671 ORTHO05D004497 6.3e-29 131.0 117 59.8
Sopen12g005340 Solanum pennellii HOM05D005671 ORTHO05D004497 1.2e-27 126.7 126 65.9
Sopen06g020570 Solanum pennellii HOM05D005671 ORTHO05D004497 4.5e-27 124.8 92 66.3
Sopen00g012720 Solanum pennellii HOM05D005671 ORTHO05D004497 7.7e-27 124.0 72 80.6
Sopen00g013100 Solanum pennellii HOM05D005671 ORTHO05D004497 2.2e-26 122.5 92 66.3
Sopen00g009060 Solanum pennellii HOM05D005671 ORTHO05D004497 5.5e-25 117.9 72 79.2
Solyc00g500270.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.7e-24 115.5 97 61.9
Solyc03g006715.2 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.7e-24 114.8 105 57.1
Sopen00g011410 Solanum pennellii HOM05D005671 ORTHO05D004497 4.7e-24 114.8 117 53.8
Solyc09g009173.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.0e-24 114.0 72 76.4
Solyc11g073315.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-23 112.8 109 56.0
Sopen00g002980 Solanum pennellii HOM05D005671 ORTHO05D004497 2.3e-23 112.5 129 51.2
Sopen00g010810 Solanum pennellii HOM05D005671 ORTHO05D004497 4.0e-23 111.7 91 62.6
Sopen00g012730 Solanum pennellii HOM05D005671 ORTHO05D004497 4.0e-23 111.7 72 73.6
Solyc00g500269.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.2e-23 111.3 121 51.2
Solyc00g500377.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.2e-23 111.3 129 48.8
Solyc08g069238.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.8e-23 110.5 70 77.1
Solyc03g006716.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.5e-22 107.5 69 75.4
Solyc12g150102.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.7e-21 105.1 109 54.1
Sopen11g001010 Solanum pennellii HOM05D005671 ORTHO05D004497 3.7e-21 105.1 94 62.8
Solyc05g006605.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.0e-20 100.9 92 58.7
Solyc00g500283.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.1e-20 100.5 133 44.4
Solyc08g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-19 99.8 97 55.7
Sopen00g011750 Solanum pennellii HOM05D005671 ORTHO05D004497 1.6e-19 99.8 74 66.2
Solyc09g009587.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-19 99.4 72 70.8
Solyc01g150106.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.7e-19 99.0 75 68.0
Solyc04g064956.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.0e-18 97.1 67 76.1
Solyc09g009734.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.0e-18 97.1 70 67.1
Solyc05g004003.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.8e-18 95.1 72 66.7
Solyc05g004007.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.8e-18 95.1 154 39.0
Solyc00g500379.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.2e-17 92.0 179 36.3
Solyc12g100363.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.2e-17 92.0 62 71.0
Solyc00g500387.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.2e-17 91.7 116 44.8
Sopen10g036190 Solanum pennellii HOM05D005671 ORTHO05D004497 5.5e-17 91.3 70 65.7
Solyc06g150122.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.4e-17 90.5 116 43.1
Solyc01g150105.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-16 90.1 134 42.5
Solyc04g075018.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-16 90.1 118 46.6
Solyc05g053133.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-16 90.1 109 47.7
Solyc08g069237.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-16 89.7 72 65.3
Solyc01g008473.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.1e-16 89.4 117 44.4
Solyc09g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.7e-16 89.0 114 45.6
Solyc01g009305.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.6e-16 88.6 158 38.6
Solyc09g098603.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.8e-15 84.0 128 40.6
Solyc10g150100.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.8e-15 84.0 120 43.3
Solyc04g150100.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-14 82.8 119 41.2
Solyc12g150128.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-14 82.8 71 66.2
Sopen04g036640 Solanum pennellii HOM05D005671 ORTHO05D004497 2.0e-14 82.8 138 40.6
Sopen09g030900 Solanum pennellii HOM05D005671 ORTHO05D004497 3.4e-14 82.0 151 38.4
Solyc03g061653.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.4e-14 81.6 91 51.6
Solyc01g004008.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.7e-14 81.3 70 61.4
Solyc09g005135.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-13 80.1 124 39.5
Solyc00g500386.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.7e-13 78.6 72 56.9
Sopen07g026870 Solanum pennellii HOM05D000061 ORTHO05D000050 1.8e-12 76.3 48 72.9
Solyc10g086783.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.4e-12 75.9 68 57.4
Solyc08g007715.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.1e-12 75.5 65 61.5
Solyc12g098827.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-11 73.2 48 72.9
Solyc05g021415.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.7e-11 72.4 97 44.3
Solyc01g008479.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.5e-11 72.0 65 58.5
Solyc03g005395.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.5e-11 72.0 47 74.5
Solyc12g150129.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.5e-11 72.0 61 63.9
Solyc03g004007.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.7e-11 70.9 130 34.6
Solyc04g075014.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.7e-11 70.9 48 70.8
Solyc11g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.0e-10 70.5 79 46.8
Solyc12g098823.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.0e-10 70.5 65 58.5
Solyc03g124061.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.6e-10 67.8 114 50.0
Solyc10g080782.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.6e-10 67.8 109 40.4
Solyc00g500235.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.6e-10 67.4 43 72.1
Solyc01g008475.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.6e-10 67.4 65 56.9
Solyc01g150104.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.6e-10 67.4 65 53.8
Solyc03g006714.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.6e-10 67.4 65 55.4
Solyc06g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.1e-09 67.0 46 69.6
Solyc09g098604.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.1e-09 67.0 46 69.6
Solyc08g069236.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.5e-09 65.9 63 57.1
Solyc04g064958.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.3e-09 65.5 46 69.6
Solyc01g008477.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.5e-09 64.7 48 66.7
Solyc03g006712.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.2e-09 64.3 65 55.4
Solyc08g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.1e-08 62.8 68 52.9
Solyc03g006907.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.1e-08 61.2 54 59.3
Solyc03g005393.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.0e-08 60.8 126 34.9
Solyc02g014871.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.0e-07 60.5 100 39.0
Solyc01g004006.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-07 59.7 54 57.4
Solyc08g006257.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.8e-07 59.7 35 77.1
Sopen00g007500 Solanum pennellii HOM05D005671 ORTHO05D004497 2.3e-07 59.3 151 33.1
Solyc05g021405.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.2e-07 58.2 65 50.8
Solyc08g006255.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.2e-07 58.2 35 74.3
Solyc00g500246.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.9e-07 57.4 126 34.9
Solyc03g061657.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.9e-07 57.4 131 35.1
Solyc00g500121.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-06 56.2 64 48.4
Solyc00g500282.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.6e-06 55.8 69 46.4
Solyc01g150107.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.6e-06 55.8 92 41.3
Solyc00g500356.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.4e-06 55.1 72 45.8
Solyc03g005217.1 Solanum lycopersicum HOM05D005671 ORTHO05D391956 5.7e-06 54.7 24 95.8
Solyc01g004002.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.5e-06 54.3 34 73.5
Solyc07g007335.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.5e-06 54.3 24 87.5


User provided reference genes

Program Settings