Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 1.0e-49 199.9 109 100.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 1.0e-49 199.9 109 100.0
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.1e-48 196.4 109 98.2
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 2.6e-45 185.3 108 90.7
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 1.4e-43 179.5 109 88.1
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.0e-43 177.2 109 87.2
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 9.1e-43 176.8 107 87.9
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.2e-34 149.8 104 76.9
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.2e-34 149.8 104 75.0
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 3.5e-34 148.3 104 74.0
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 8.5e-33 143.7 102 74.5
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.9e-32 142.5 101 70.3
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 7.2e-32 140.6 104 72.1
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.6e-31 139.4 99 73.7
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 3.6e-31 138.3 106 67.9
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 4.7e-31 137.9 100 74.0
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 6.1e-31 137.5 103 69.9
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 8.0e-31 137.1 102 71.6
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 1.0e-30 136.7 103 68.9
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.4e-30 136.3 102 71.6
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.4e-30 136.3 102 71.6
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.8e-30 136.0 101 71.3
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 1.8e-30 136.0 103 68.9
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 2.3e-30 135.6 102 69.6
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 3.0e-30 135.2 102 70.6
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 3.0e-30 135.2 106 69.8
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 3.0e-30 135.2 98 69.4
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 3.0e-30 135.2 103 70.9
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 3.0e-30 135.2 102 70.6
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 4.0e-30 134.8 102 71.6
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.0e-30 134.8 102 70.6
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.0e-30 134.8 102 70.6
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 5.2e-30 134.4 101 69.3
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 6.8e-30 134.0 108 67.6
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 6.8e-30 134.0 101 68.3
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 6.8e-30 134.0 105 67.6
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 6.8e-30 134.0 105 67.6
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 8.8e-30 133.7 102 66.7
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 1.2e-29 133.3 104 67.3
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.2e-29 133.3 100 72.0
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.2e-29 133.3 102 69.6
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 1.5e-29 132.9 98 70.4
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.0e-29 132.5 102 69.6
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 2.0e-29 132.5 102 70.6
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 2.6e-29 132.1 103 66.0
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.6e-29 132.1 102 67.6
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 2.6e-29 132.1 103 68.9
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 3.4e-29 131.7 102 66.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 3.4e-29 131.7 100 65.0
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 3.4e-29 131.7 100 68.0
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 4.4e-29 131.3 104 67.3
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 4.4e-29 131.3 102 68.6
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 5.7e-29 131.0 102 68.6
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 5.7e-29 131.0 102 67.6
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 9.8e-29 130.2 100 66.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 9.8e-29 130.2 102 66.7
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 2.2e-28 129.0 109 66.1
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 2.2e-28 129.0 100 67.0
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 2.2e-28 129.0 125 62.4
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.8e-28 128.6 99 65.7
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 2.8e-28 128.6 102 65.7
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 3.7e-28 128.3 103 67.0
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 3.7e-28 128.3 109 64.2
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 3.7e-28 128.3 102 66.7
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 3.7e-28 128.3 103 66.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 4.8e-28 127.9 101 64.4
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 4.8e-28 127.9 101 64.4
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 4.8e-28 127.9 101 64.4
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 4.8e-28 127.9 101 64.4
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 6.3e-28 127.5 100 62.0
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 8.3e-28 127.1 98 68.4
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 8.3e-28 127.1 101 64.4
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 1.4e-27 126.3 101 63.4
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.8e-27 125.9 99 65.7
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 1.8e-27 125.9 99 66.7
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 3.1e-27 125.2 101 65.3
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 3.1e-27 125.2 103 66.0
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 4.1e-27 124.8 103 65.0
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 7.0e-27 124.0 101 62.4
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 7.0e-27 124.0 105 60.0
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 9.1e-27 123.6 105 59.0
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 1.2e-26 123.2 107 57.0
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 1.2e-26 123.2 101 64.4
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 1.2e-26 123.2 101 64.4
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 1.2e-26 123.2 100 64.0
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.6e-26 122.9 101 62.4
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 1.6e-26 122.9 103 65.0
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 2.0e-26 122.5 101 63.4
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 2.7e-26 122.1 101 62.4
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 2.7e-26 122.1 99 64.6
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 2.7e-26 122.1 103 64.1
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 3.5e-26 121.7 101 62.4
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 4.5e-26 121.3 98 64.3
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 5.9e-26 120.9 102 61.8
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 2.9e-25 118.6 108 62.0
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 3.8e-25 118.2 157 51.0
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 8.6e-25 117.1 107 57.9
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.6e-23 112.8 98 62.2
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 2.3e-22 109.0 85 65.9
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 3.0e-22 108.6 98 60.2
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 3.0e-22 108.6 102 56.9
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 5.2e-22 107.8 102 62.7
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 5.7e-21 104.4 96 56.2
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.3e-20 103.2 79 68.4
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 3.7e-20 101.7 83 65.1
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.7e-20 101.7 77 70.1
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.4e-19 99.8 102 50.0
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 4.1e-19 98.2 176 38.6
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.2e-18 96.7 76 65.8
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 1.6e-18 96.3 76 67.1
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 2.0e-18 95.9 76 65.8
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.5e-18 95.1 78 62.8
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 3.8e-17 91.7 78 61.5
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 5.0e-17 91.3 77 62.3
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 3.3e-16 88.6 75 60.0
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 4.3e-16 88.2 77 61.0
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 7.3e-16 87.4 83 56.6
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.2e-15 86.7 74 62.2
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 3.0e-14 82.0 108 43.5
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 6.0e-10 67.8 106 40.6
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.7e-09 66.2 55 63.6
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 6.6e-09 64.3 50 62.0
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 3.3e-08 62.0 58 53.4
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 3.3e-08 62.0 58 53.4
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.8e-06 56.2 84 39.3


User provided reference genes

Program Settings