Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 0.0e+00 1338.6 707 100.0
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 0.0e+00 1192.6 675 94.5
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 0.0e+00 1080.5 674 85.3
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 6.5e-283 977.2 675 77.0
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 1.4e-256 889.8 677 71.6
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 8.7e-219 764.2 690 63.6
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 5.1e-195 685.3 683 57.8
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 3.3e-186 656.0 690 55.4
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 6.9e-184 648.3 683 55.2
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 2.9e-182 642.9 684 54.8
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 1.9e-181 640.2 688 54.4
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 1.9e-181 640.2 681 56.1
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 1.2e-180 637.5 684 54.1
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 3.6e-180 636.0 684 54.5
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 1.0e-179 634.4 698 52.4
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 1.9e-178 630.2 557 62.3
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 1.5e-175 620.5 680 52.6
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 7.7e-175 618.2 772 49.6
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 1.9e-173 613.6 688 52.0
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 7.2e-173 611.7 776 49.5
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 3.6e-172 609.4 706 52.8
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 3.6e-172 609.4 702 50.7
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 4.7e-172 609.0 682 52.2
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 6.1e-172 608.6 689 50.9
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 1.4e-171 607.4 684 52.5
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 5.7e-170 602.1 687 51.1
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 7.4e-170 601.7 709 51.2
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 1.7e-169 600.5 684 52.9
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 2.2e-169 600.1 719 50.9
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 5.3e-168 595.5 684 52.6
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 1.2e-167 594.3 683 52.4
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 6.5e-166 588.6 691 51.1
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 5.5e-165 585.5 712 49.7
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 7.2e-165 585.1 784 47.8
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 9.4e-165 584.7 711 50.6
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 1.0e-163 581.3 663 51.4
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 1.0e-163 581.3 848 46.5
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 1.4e-163 580.9 685 50.5
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 1.7e-161 573.9 698 50.9
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 4.8e-161 572.4 762 46.9
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 1.4e-160 570.9 749 47.8
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 3.1e-160 569.7 683 51.0
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 7.0e-160 568.5 685 51.1
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 7.0e-160 568.5 682 50.4
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 9.1e-160 568.2 713 47.8
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 3.5e-159 566.2 721 50.1
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 1.7e-158 563.9 674 48.8
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 1.7e-158 563.9 755 46.5
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 3.8e-158 562.8 715 47.4
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 8.5e-158 561.6 690 50.6
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 5.5e-157 558.9 793 46.3
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 9.4e-157 558.1 740 46.4
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 2.7e-156 556.6 785 45.4
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 3.0e-155 553.1 717 48.3
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 1.5e-154 550.8 712 48.0
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 2.0e-154 550.4 695 47.8
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 2.6e-154 550.1 756 46.4
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 4.4e-154 549.3 704 48.6
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 9.7e-154 548.1 680 48.1
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 4.1e-152 542.7 761 44.8
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 3.8e-150 536.2 677 47.4
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.9e-149 533.9 754 45.2
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 2.5e-149 533.5 721 47.6
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 6.8e-147 525.4 688 47.2
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 2.0e-146 523.9 661 49.8
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 6.3e-145 518.8 707 46.3
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 1.1e-144 518.1 709 47.0
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 2.4e-144 516.9 645 47.4
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 1.6e-143 514.2 664 45.8
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 5.9e-143 512.3 690 48.4
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 1.0e-142 511.5 745 44.2
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 7.2e-141 505.4 745 44.0
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 1.4e-139 501.1 364 71.7
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 1.4e-139 501.1 729 44.2
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 6.8e-139 498.8 778 42.4
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 1.2e-138 498.0 747 44.0
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 1.1e-136 491.5 488 58.2
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 1.3e-134 484.6 768 42.2
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 8.6e-134 481.9 746 43.4
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 3.6e-132 476.5 752 43.0
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 3.6e-132 476.5 752 43.0
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 4.7e-132 476.1 699 44.9
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.0e-131 474.9 754 42.3
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 3.1e-131 473.4 752 42.7
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 3.1e-131 473.4 752 42.7
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 6.8e-131 472.2 728 42.6
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.5e-130 471.1 779 40.9
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 1.5e-130 471.1 681 45.2
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 4.9e-129 466.1 560 47.3
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 1.4e-128 464.5 862 38.4
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 1.2e-127 461.5 862 38.5
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 3.5e-127 459.9 489 53.8
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 1.1e-125 454.9 726 42.1
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 1.3e-121 441.4 621 46.5
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 1.7e-121 441.0 234 94.9
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 1.2e-116 424.9 780 37.4
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 1.2e-116 424.9 472 51.9
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 3.1e-115 420.2 737 40.3
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 3.3e-109 400.2 549 45.5
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 7.6e-106 389.0 750 37.2
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 7.3e-101 372.5 814 35.6
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 9.6e-101 372.1 674 40.4
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.2e-100 371.7 339 59.3
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 2.9e-97 360.5 573 44.2
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 3.0e-94 350.5 788 35.7
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.1e-71 274.6 280 56.1
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 6.0e-71 273.1 199 76.9
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 1.8e-70 271.6 203 66.0
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 1.9e-69 268.1 433 42.7
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.1e-67 262.3 367 47.1
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 2.0e-58 231.5 291 47.4
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 3.0e-54 217.6 357 43.4
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 4.5e-50 203.8 188 62.8
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.3e-36 159.1 489 30.1
Actinidia02761 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.2e-36 158.3 137 56.9
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 2.1e-31 141.7 250 34.8
Eucgr.H01192 Eucalyptus grandis HOM05D002567 ORTHO05D006538 4.7e-31 140.6 114 66.7
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 1.8e-30 138.7 196 49.0
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 4.1e-27 127.5 208 43.8
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 1.7e-25 122.1 220 34.5
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 4.4e-21 107.5 175 44.0
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 9.8e-21 106.3 334 31.4
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 1.1e-19 102.8 279 29.0
MBI01_g23938_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.6e-18 99.0 79 55.7
Solyc09g074700.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 3.5e-18 97.8 59 86.4
MBI05_g31851_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 2.5e-16 91.7 80 52.5
MBI02_g41934_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 4.3e-16 90.9 90 60.0
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 4.9e-12 77.4 66 56.1
BcaC04g23997 Brassica carinata HOM05D002567 ORTHO05D006538 7.0e-11 73.6 70 54.3
Actinidia32248 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.1e-06 59.7 59 59.3
Mapoly0004s0277 Marchantia polymorpha HOM05D002567 ORTHO05D006538 2.3e-06 58.5 72 43.1
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 4.0e-06 57.8 69 43.5
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 5.2e-06 57.4 72 43.1


User provided reference genes

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