Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 4.2e-113 411.4 210 100.0
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 7.8e-91 337.4 183 95.6
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 1.1e-73 280.4 184 81.5
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 1.1e-73 280.4 184 81.5
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 1.1e-71 273.9 199 76.9
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 2.6e-70 269.2 183 78.1
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 8.3e-69 264.2 184 77.7
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 4.1e-68 261.9 190 77.4
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 4.8e-48 195.3 184 60.3
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 2.4e-47 193.0 188 56.9
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 1.2e-46 190.7 185 56.8
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 3.4e-46 189.1 185 58.4
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 4.5e-46 188.7 189 57.1
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 5.8e-46 188.3 186 58.1
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 9.9e-46 187.6 190 55.8
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 2.2e-45 186.4 189 55.6
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 2.2e-45 186.4 183 57.9
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 2.9e-45 186.0 190 55.3
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 6.4e-45 184.9 189 56.1
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 8.4e-45 184.5 185 54.1
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 1.1e-44 184.1 199 53.8
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 1.4e-44 183.7 184 58.2
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 1.4e-44 183.7 184 58.2
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 1.4e-44 183.7 177 58.2
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 1.9e-44 183.3 192 58.3
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 2.4e-44 183.0 188 56.9
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 2.4e-44 183.0 184 58.2
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 7.1e-44 181.4 198 54.0
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 7.1e-44 181.4 205 52.7
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 9.3e-44 181.0 184 59.2
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 9.3e-44 181.0 184 56.0
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 1.2e-43 180.6 191 55.0
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 1.2e-43 180.6 197 55.3
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 2.1e-43 179.9 175 60.0
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 2.7e-43 179.5 186 57.5
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 2.7e-43 179.5 195 52.8
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 6.0e-43 178.3 189 55.0
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 1.3e-42 177.2 204 51.0
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.8e-42 176.8 190 55.8
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 3.0e-42 176.0 198 50.0
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 3.0e-42 176.0 211 50.2
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 3.0e-42 176.0 185 55.7
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 3.0e-42 176.0 190 57.9
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 6.7e-42 174.9 190 54.2
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 8.7e-42 174.5 184 53.8
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 8.7e-42 174.5 205 49.8
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 1.1e-41 174.1 175 56.6
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.1e-41 174.1 196 51.0
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 1.1e-41 174.1 201 51.2
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 1.5e-41 173.7 191 54.5
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 1.5e-41 173.7 198 51.0
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 3.3e-41 172.6 171 56.7
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 4.3e-41 172.2 202 53.0
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 4.3e-41 172.2 196 50.5
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 5.6e-41 171.8 193 51.3
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 9.6e-41 171.0 197 52.3
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 9.6e-41 171.0 184 53.8
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 9.6e-41 171.0 196 50.5
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 2.8e-40 169.5 188 52.1
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 3.7e-40 169.1 175 54.3
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 3.7e-40 169.1 171 55.0
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 3.7e-40 169.1 196 49.5
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 3.7e-40 169.1 193 50.3
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 3.7e-40 169.1 184 54.3
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 8.1e-40 167.9 192 55.7
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 8.1e-40 167.9 175 53.1
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 8.1e-40 167.9 181 54.1
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 2.4e-39 166.4 190 51.6
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 4.0e-39 165.6 171 55.0
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 4.0e-39 165.6 171 55.0
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 4.0e-39 165.6 182 51.1
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 9.0e-39 164.5 171 54.4
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 9.0e-39 164.5 171 54.4
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 9.0e-39 164.5 184 52.7
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 2.0e-38 163.3 171 54.4
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 2.0e-38 163.3 196 49.5
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 2.6e-38 162.9 186 50.0
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 4.5e-38 162.2 175 52.6
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 1.3e-37 160.6 195 49.2
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 4.9e-37 158.7 175 52.0
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 2.5e-36 156.4 178 51.7
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 3.2e-36 156.0 209 47.8
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 5.5e-36 155.2 178 51.7
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 7.1e-36 154.8 187 49.2
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 2.1e-35 153.3 164 51.8
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 3.5e-35 152.5 181 50.3
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 4.6e-35 152.1 179 51.4
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 6.7e-34 148.3 166 51.2
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 2.5e-33 146.4 176 50.0
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 2.5e-33 146.4 191 47.6
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 3.3e-33 146.0 181 46.4
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 4.3e-33 145.6 181 45.9
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 4.3e-33 145.6 181 46.4
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 9.6e-33 144.4 152 55.3
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 6.2e-32 141.7 151 52.3
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 1.1e-31 141.0 155 50.3
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 5.8e-30 135.2 176 47.2
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 2.5e-28 129.8 148 52.7
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 4.6e-27 125.6 163 43.6
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 6.1e-27 125.2 219 39.7
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 5.1e-26 122.1 131 53.4
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 4.5e-22 109.0 113 57.5
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.3e-21 107.5 110 54.5
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 3.8e-21 105.9 277 32.1
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 3.6e-19 99.4 86 59.3
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 1.4e-18 97.4 78 60.3
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 2.5e-17 93.2 77 59.7
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.0e-13 81.3 57 64.9
Actinidia02762 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.6e-11 73.9 93 52.7
BcaC04g23997 Brassica carinata HOM05D002567 ORTHO05D006538 1.1e-09 67.8 55 60.0
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.1e-07 61.2 233 27.5
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 1.4e-07 60.8 71 40.8
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 3.1e-07 59.7 196 28.6
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 4.1e-07 59.3 63 42.9
CBR_g48344 Chara braunii HOM05D002567 ORTHO05D006538 7.0e-07 58.5 124 35.5


User provided reference genes

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