Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g072860.2 Solanum lycopersicum HOM05D007808 ORTHO05D009895 1.1e-262 909.4 460 100.0
Sopen09g028660 Solanum pennellii HOM05D007808 ORTHO05D009895 2.9e-255 884.8 460 97.2
Peaxi162Scf00415g00913 Petunia axillaris HOM05D007808 ORTHO05D009895 3.8e-183 645.2 441 75.3
Nitab4.5_0010039g0030 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.1e-169 600.5 445 71.0
Nitab4.5_0000845g0040 Nicotiana tabacum HOM05D007808 ORTHO05D009895 1.8e-169 599.7 445 71.2
Lj2C1144T6 Lonicera japonica HOM05D007808 ORTHO05D009895 2.3e-119 433.3 456 48.0
CAN.G1395.2 Capsicum annuum HOM05D007808 ORTHO05D009895 6.2e-117 425.2 322 71.7
Migut.D00468 Erythranthe guttata HOM05D007808 ORTHO05D009895 1.2e-107 394.4 481 46.2
Hma1.2p1_0273F.1_g109280 Hydrangea macrophylla HOM05D007808 ORTHO05D009895 2.9e-106 389.8 460 45.9
Actinidia37545 Actinidia chinensis HOM05D007808 ORTHO05D009895 8.7e-103 378.3 458 44.1
QL09p041160 Quercus lobata HOM05D007808 ORTHO05D009895 6.2e-101 372.1 459 44.4
Atru.chr5.1818 Acer truncatum HOM05D007808 ORTHO05D009895 1.8e-100 370.5 461 43.2
CANSAT01G0990 Cannabis sativa HOM05D007808 ORTHO05D009895 3.1e-100 369.8 463 44.5
Nn1g02938 Nelumbo nucifera HOM05D007808 ORTHO05D009895 2.6e-99 366.7 489 41.7
Oeu039657.1 Olea europaea HOM05D007808 ORTHO05D009895 1.7e-98 364.0 501 40.9
Thecc.01G251900 Theobroma cacao HOM05D007808 ORTHO05D009895 2.9e-98 363.2 466 44.0
PSO832G1361 Papaver somniferum HOM05D007808 ORTHO05D009895 1.1e-97 361.3 459 43.1
Potri.014G192200 Populus trichocarpa HOM05D007808 ORTHO05D009895 1.1e-97 361.3 464 43.5
RcHm_v2.0_Chr6g0286881 Rosa chinensis HOM05D007808 ORTHO05D009895 2.4e-97 360.1 461 44.5
TAR633G0330 Trochodendron aralioides HOM05D007808 ORTHO05D009895 9.3e-97 358.2 490 42.0
Ciclev10020041m.g Citrus clementina HOM05D007808 ORTHO05D009895 1.2e-96 357.8 461 42.1
Manes.13G040600 Manihot esculenta HOM05D007808 ORTHO05D009895 1.2e-96 357.8 464 41.2
Duzib138G1393 Durio zibethinus HOM05D007808 ORTHO05D009895 6.0e-96 355.5 474 42.4
Cc01_g17900 Coffea canephora HOM05D007808 ORTHO05D009895 7.9e-96 355.1 459 44.4
Gohir.D07G157600 Gossypium hirsutum HOM05D007808 ORTHO05D009895 6.7e-95 352.1 464 42.0
HanXRQChr04g0111341 Helianthus annuus HOM05D007808 ORTHO05D009895 6.7e-95 352.1 463 41.9
SalBow4G3111 Salvia bowleyana HOM05D007808 ORTHO05D009895 6.7e-95 352.1 440 44.3
FvH4_2g20710 Fragaria vesca HOM05D007808 ORTHO05D009895 3.3e-94 349.7 460 43.0
Gohir.A07G151000 Gossypium hirsutum HOM05D007808 ORTHO05D009895 2.8e-93 346.7 464 41.6
Aqoxy5G00155 Aquilegia oxysepala HOM05D007808 ORTHO05D009895 4.8e-93 345.9 452 43.4
GSVIVG01028406001 Vitis vinifera HOM05D007808 ORTHO05D009895 1.4e-92 344.4 447 42.7
COL.COLO4_10584 Corchorus olitorius HOM05D007808 ORTHO05D009895 1.8e-92 344.0 483 41.2
Prupe.8G216500 Prunus persica HOM05D007808 ORTHO05D009895 2.6e-91 340.1 458 42.4
DCAR_018515 Daucus carota HOM05D007808 ORTHO05D009895 4.5e-91 339.3 429 43.1
TWI18G1304 Tripterygium wilfordii HOM05D007808 ORTHO05D009895 2.9e-90 336.7 487 40.7
PGR031G1809 Punica granatum HOM05D007808 ORTHO05D009895 2.3e-87 327.0 464 40.1
FAN20G2653 Fragaria x ananassa HOM05D007808 ORTHO05D009895 6.7e-87 325.5 444 42.1
AL8G16070 Arabidopsis lyrata HOM05D007808 ORTHO05D009895 8.7e-87 325.1 456 39.7
FAN27G2486 Fragaria x ananassa HOM05D007808 ORTHO05D009895 1.1e-86 324.7 444 42.1
MBI10_g30718_MAGBIO Magnolia biondii HOM05D007808 ORTHO05D009895 5.7e-86 322.4 479 41.3
Carub.0008s0453 Capsella rubella HOM05D007808 ORTHO05D009895 1.3e-85 321.2 458 40.4
SGA_v2.0_scaffold1G00644 Striga asiatica HOM05D007808 ORTHO05D009895 4.8e-85 319.3 472 39.8
AT5G44010 Arabidopsis thaliana HOM05D007808 ORTHO05D009895 1.4e-84 317.8 456 39.5
FAN15G3261 Fragaria x ananassa HOM05D007808 ORTHO05D009895 3.1e-84 316.6 429 42.9
Gorai.001G180500 Gossypium raimondii HOM05D007808 ORTHO05D009895 1.4e-81 307.8 475 40.0
A09p20750 Brassica napus HOM05D007808 ORTHO05D009895 7.2e-81 305.4 454 39.0
BcaB07g30982 Brassica carinata HOM05D007808 ORTHO05D009895 9.3e-81 305.1 456 39.0
BraA09t37679Z Brassica rapa HOM05D007808 ORTHO05D009895 2.7e-80 303.5 454 38.8
FAN24G0750 Fragaria x ananassa HOM05D007808 ORTHO05D009895 4.6e-80 302.8 427 41.7
BcaC04g21876 Brassica carinata HOM05D007808 ORTHO05D009895 3.9e-79 299.7 454 38.3
C09p26260 Brassica napus HOM05D007808 ORTHO05D009895 3.9e-79 299.7 454 38.3
PSO764G0215 Papaver somniferum HOM05D007808 ORTHO05D009895 9.7e-78 295.0 458 38.0
CSS0046569 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 2.2e-77 293.9 377 43.2
CSS0017675 Camellia sinensis var. sinensis HOM05D007808 ORTHO05D009895 3.7e-77 293.1 377 43.0
THA.LOC104801132 Tarenaya hassleriana HOM05D007808 ORTHO05D009895 6.9e-76 288.9 456 38.4
ATR0736G152 Amborella trichopoda HOM05D007808 ORTHO05D009895 7.7e-75 285.4 450 38.4
CARHR179280 Cardamine hirsuta HOM05D007808 ORTHO05D009895 7.2e-73 278.9 406 40.1
Sc05g0003060 Simmondsia chinensis HOM05D007808 ORTHO05D009895 2.2e-69 267.3 406 39.9
Lsat_1_v5_gn_8_92100 Lactuca sativa HOM05D007808 ORTHO05D009895 4.5e-67 259.6 410 37.3
BolC9t55528H Brassica oleracea HOM05D007808 ORTHO05D009895 1.9e-65 254.2 403 38.0
Sabra14G0143900 Salix brachista HOM05D007808 ORTHO05D009895 7.2e-65 252.3 319 42.6
Os02g0814600 Oryza sativa ssp. japonica HOM05D007808 ORTHO05D009895 6.3e-61 239.2 470 33.4
Thhalv10003421m.g Eutrema salsugineum HOM05D007808 ORTHO05D009895 4.5e-59 233.0 456 33.3
HPP92_025831 Vanilla planifolia HOM05D007808 ORTHO05D009895 5.9e-59 232.6 454 32.4
Zm00001eb191560 Zea mays HOM05D007808 ORTHO05D009895 4.7e-56 223.0 454 31.7
BcaC04g21877 Brassica carinata HOM05D007808 ORTHO05D009895 5.2e-55 219.5 396 35.6
Eucgr.A01321 Eucalyptus grandis HOM05D007808 ORTHO05D009895 3.7e-53 213.4 372 33.9
CiPaw.04G189500 Carya illinoinensis HOM05D007808 ORTHO05D009895 5.0e-50 203.0 213 48.8
Haze_24684 Corylus avellana HOM05D007808 ORTHO05D009895 8.8e-47 192.2 240 44.2
Cpa.g.sc87.15 Carica papaya HOM05D007808 ORTHO05D009895 3.5e-43 180.3 225 44.4
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 4.4e-38 163.3 255 37.6
Gorai.002G091900 Gossypium raimondii HOM05D007808 ORTHO05D009895 8.3e-29 132.5 220 37.3
Sp2g08850 Schrenkiella parvula HOM05D007808 ORTHO05D009895 3.3e-25 120.6 402 26.9
CDE02G3651 Ceratophyllum demersum HOM05D007808 ORTHO05D009895 1.2e-24 118.6 304 29.6
PGSC0003DMG400003825 Solanum tuberosum HOM05D007808 ORTHO05D009895 6.2e-24 116.3 58 91.4
CiPaw.04G189400 Carya illinoinensis HOM05D007808 ORTHO05D009895 3.1e-23 114.0 88 58.0
SEGI_27571 Sequoiadendron giganteum HOM05D007808 ORTHO05D009895 4.0e-15 87.0 248 27.0
FAN27G0174 Fragaria x ananassa HOM05D007808 ORTHO05D009895 2.6e-14 84.3 73 52.1
AagrBONN_evm.TU.Sc2ySwM_117.2846 Anthoceros agrestis HOM05D007808 ORTHO05D009895 5.8e-14 83.2 423 22.7
Pp3c1_42330 Physcomitrium patens HOM05D007808 ORTHO05D009895 1.0e-10 72.4 113 32.7
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 6.6e-10 69.7 42 66.7


User provided reference genes

Program Settings