Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g065350.1 Solanum lycopersicum HOM05D001000 ORTHO05D002976 1.1e-76 290.0 163 100.0
Sopen09g027110 Solanum pennellii HOM05D001000 ORTHO05D002976 1.8e-55 219.5 136 94.1
PGSC0003DMG400019329 Solanum tuberosum HOM05D001000 ORTHO05D002976 1.0e-42 177.2 141 80.9
CAN.G3.10 Capsicum annuum HOM05D001000 ORTHO05D002976 4.5e-30 135.2 124 63.7
MD11G1283200 Malus domestica HOM05D001000 ORTHO05D002976 8.6e-13 77.8 112 44.6
Dinv32917 Davidia involucrata HOM05D001000 ORTHO05D002976 1.9e-12 76.6 117 43.6
Peaxi162Scf01248g00013 Petunia axillaris HOM05D001000 ORTHO05D002976 7.3e-12 74.7 101 49.5
MD03G1262500 Malus domestica HOM05D001000 ORTHO05D002976 2.8e-11 72.8 122 46.7
FAN24G1656 Fragaria x ananassa HOM05D001000 ORTHO05D002976 3.6e-11 72.4 116 41.4
DCAR_030639 Daucus carota HOM05D001000 ORTHO05D002976 4.7e-11 72.0 112 41.1
Hma1.2p1_0822F.1_g224360 Hydrangea macrophylla HOM05D001000 ORTHO05D002976 8.0e-11 71.2 122 41.8
TAR636G0381 Trochodendron aralioides HOM05D001000 ORTHO05D002976 1.1e-10 70.9 113 41.6
FAN15G0371 Fragaria x ananassa HOM05D001000 ORTHO05D002976 1.4e-10 70.5 115 43.5
Atru.chr5.1466 Acer truncatum HOM05D001000 ORTHO05D002976 1.8e-10 70.1 115 51.3
FAN27G2499 Fragaria x ananassa HOM05D001000 ORTHO05D002976 1.8e-10 70.1 118 44.1
Manes.05G078000 Manihot esculenta HOM05D001000 ORTHO05D002976 1.8e-10 70.1 118 44.1
Cc01_g19340 Coffea canephora HOM05D001000 ORTHO05D002976 2.3e-10 69.7 128 43.8
Cfa006161 Carpinus fangiana HOM05D001000 ORTHO05D002976 3.1e-10 69.3 117 41.0
Potri.005G211300 Populus trichocarpa HOM05D001000 ORTHO05D002976 4.0e-10 68.9 111 41.4
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 6.8e-10 68.2 109 41.3
Gorai.006G239700 Gossypium raimondii HOM05D001000 ORTHO05D002976 6.8e-10 68.2 106 45.3
RcHm_v2.0_Chr6g0290721 Rosa chinensis HOM05D001000 ORTHO05D002976 6.8e-10 68.2 123 51.2
Ciclev10024021m.g Citrus clementina HOM05D001000 ORTHO05D002976 8.9e-10 67.8 124 38.7
Prupe.8G238800 Prunus persica HOM05D001000 ORTHO05D002976 8.9e-10 67.8 118 40.7
FAN20G2219 Fragaria x ananassa HOM05D001000 ORTHO05D002976 2.6e-09 66.2 112 44.6
Gohir.D09G218700 Gossypium hirsutum HOM05D001000 ORTHO05D002976 2.6e-09 66.2 106 44.3
Sabra02G0041900 Salix brachista HOM05D001000 ORTHO05D002976 2.6e-09 66.2 112 45.5
TAR362G0362 Trochodendron aralioides HOM05D001000 ORTHO05D002976 2.6e-09 66.2 107 44.9
TAR633G2027 Trochodendron aralioides HOM05D001000 ORTHO05D002976 2.6e-09 66.2 61 60.7
PGR004G0529 Punica granatum HOM05D001000 ORTHO05D002976 3.4e-09 65.9 138 38.4
DCAR_002384 Daucus carota HOM05D001000 ORTHO05D002976 4.4e-09 65.5 110 40.9
Duzib138G0331 Durio zibethinus HOM05D001000 ORTHO05D002976 4.4e-09 65.5 118 41.5
Gohir.A09G216300 Gossypium hirsutum HOM05D001000 ORTHO05D002976 4.4e-09 65.5 106 44.3
CiPaw.07G090000 Carya illinoinensis HOM05D001000 ORTHO05D002976 5.8e-09 65.1 120 46.7
Manes.01G206500 Manihot esculenta HOM05D001000 ORTHO05D002976 5.8e-09 65.1 111 38.7
Thecc.01G276400 Theobroma cacao HOM05D001000 ORTHO05D002976 5.8e-09 65.1 118 39.8
Cpa.g.sc487.2 Carica papaya HOM05D001000 ORTHO05D002976 7.5e-09 64.7 116 39.7
Sabra05G0161400 Salix brachista HOM05D001000 ORTHO05D002976 7.5e-09 64.7 111 46.8
TAR633G0366 Trochodendron aralioides HOM05D001000 ORTHO05D002976 7.5e-09 64.7 107 41.1
Ah.11g050530 Amaranthus hybridus HOM05D001000 ORTHO05D002976 9.8e-09 64.3 137 38.0
Thecc.04G232700 Theobroma cacao HOM05D001000 ORTHO05D002976 1.3e-08 63.9 113 41.6
Dinv34771 Davidia involucrata HOM05D001000 ORTHO05D002976 1.7e-08 63.5 123 39.0
TWI12G0467 Tripterygium wilfordii HOM05D001000 ORTHO05D002976 1.7e-08 63.5 114 43.9
Lsat_1_v5_gn_5_184400 Lactuca sativa HOM05D001000 ORTHO05D002976 2.2e-08 63.2 116 50.0
Duzib133G0897 Durio zibethinus HOM05D001000 ORTHO05D002976 2.9e-08 62.8 112 44.6
TWI09G0882 Tripterygium wilfordii HOM05D001000 ORTHO05D002976 2.9e-08 62.8 113 40.7
TWI18G0499 Tripterygium wilfordii HOM05D001000 ORTHO05D002976 4.9e-08 62.0 110 42.7
Aqoxy2G03395 Aquilegia oxysepala HOM05D001000 ORTHO05D002976 6.4e-08 61.6 62 56.5
CiPaw.08G107000 Carya illinoinensis HOM05D001000 ORTHO05D002976 6.4e-08 61.6 126 37.3
Potri.002G051200 Populus trichocarpa HOM05D001000 ORTHO05D002976 6.4e-08 61.6 112 41.1
DCAR_012488 Daucus carota HOM05D001000 ORTHO05D002976 8.3e-08 61.2 116 39.7
Duzib052G0755 Durio zibethinus HOM05D001000 ORTHO05D002976 8.3e-08 61.2 99 43.4
Ciclev10006578m.g Citrus clementina HOM05D001000 ORTHO05D002976 1.1e-07 60.8 110 40.9
TAR365G1168 Trochodendron aralioides HOM05D001000 ORTHO05D002976 1.1e-07 60.8 110 48.2
MSTRG.18244 Avicennia marina HOM05D001000 ORTHO05D002976 1.4e-07 60.5 120 39.2
DCAR_002726 Daucus carota HOM05D001000 ORTHO05D002976 1.4e-07 60.5 65 55.4
Hma1.2p1_0667F.1_g199700 Hydrangea macrophylla HOM05D001000 ORTHO05D002976 1.9e-07 60.1 119 38.7
CiPaw.02G097500 Carya illinoinensis HOM05D001000 ORTHO05D002976 2.4e-07 59.7 104 43.3
Dinv44538 Davidia involucrata HOM05D001000 ORTHO05D002976 2.4e-07 59.7 121 39.7
Oeu034960.1 Olea europaea HOM05D001000 ORTHO05D002976 2.4e-07 59.7 129 38.0
COL.COLO4_09070 Corchorus olitorius HOM05D001000 ORTHO05D002976 3.2e-07 59.3 120 36.7
CiPaw.01G166800 Carya illinoinensis HOM05D001000 ORTHO05D002976 4.1e-07 58.9 128 37.5
Peaxi162Scf00092g00082 Petunia axillaris HOM05D001000 ORTHO05D002976 4.1e-07 58.9 123 35.0
Cfa015654 Carpinus fangiana HOM05D001000 ORTHO05D002976 5.4e-07 58.5 120 39.2
Cc03_g03850 Coffea canephora HOM05D001000 ORTHO05D002976 5.4e-07 58.5 72 50.0
Nn4g26331 Nelumbo nucifera HOM05D001000 ORTHO05D002976 5.4e-07 58.5 115 38.3
COL.COLO4_21485 Corchorus olitorius HOM05D001000 ORTHO05D002976 7.1e-07 58.2 119 40.3
Nitab4.5_0013107g0010 Nicotiana tabacum HOM05D001000 ORTHO05D002976 9.2e-07 57.8 74 43.2
Oeu020076.1 Olea europaea HOM05D001000 ORTHO05D002976 9.2e-07 57.8 65 50.8
PGSC0003DMG400032276 Solanum tuberosum HOM05D001000 ORTHO05D002976 9.2e-07 57.8 77 45.5
TAR633G0008 Trochodendron aralioides HOM05D001000 ORTHO05D002976 9.2e-07 57.8 112 38.4
Haze_00891 Corylus avellana HOM05D001000 ORTHO05D002976 1.6e-06 57.0 112 39.3
Eucgr.H03462 Eucalyptus grandis HOM05D001000 ORTHO05D002976 1.6e-06 57.0 70 50.0
Haze_04688 Corylus avellana HOM05D001000 ORTHO05D002976 3.5e-06 55.8 117 36.8
Gohir.A11G123700 Gossypium hirsutum HOM05D001000 ORTHO05D002976 3.5e-06 55.8 119 37.0
Gohir.D11G128900 Gossypium hirsutum HOM05D001000 ORTHO05D002976 3.5e-06 55.8 122 35.2
Lj5g0016912 Lotus japonicus HOM05D001000 ORTHO05D002976 4.6e-06 55.5 116 40.5
Phvul.007G173000 Phaseolus vulgaris HOM05D001000 ORTHO05D002976 4.6e-06 55.5 77 48.1
Gohir.D08G074400 Gossypium hirsutum HOM05D001000 ORTHO05D002976 6.0e-06 55.1 111 40.5
Gorai.004G078700 Gossypium raimondii HOM05D001000 ORTHO05D002976 6.0e-06 55.1 111 40.5
Atru.chr4.2457 Acer truncatum HOM05D001000 ORTHO05D002976 7.8e-06 54.7 69 52.2
Nn1g02331 Nelumbo nucifera HOM05D001000 ORTHO05D002976 7.8e-06 54.7 115 38.3
QL06p002196 Quercus lobata HOM05D001000 ORTHO05D002976 7.8e-06 54.7 119 37.0


User provided reference genes

Program Settings