Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g064980.1 Solanum lycopersicum HOM05D000021 ORTHO05D000010 2.4e-198 695.7 456 100.0
Solyc09g064990.1 Solanum lycopersicum HOM05D000021 ORTHO05D000010 2.0e-19 101.3 73 67.1
CAN.G1635.24 Capsicum annuum HOM05D000021 ORTHO05D000010 1.2e-16 92.0 242 49.2
CAN.G1909.6 Capsicum annuum HOM05D000021 ORTHO05D000010 1.8e-15 88.2 64 70.3
CAN.G875.6 Capsicum annuum HOM05D000021 ORTHO05D000010 9.8e-14 82.4 65 61.5
CAN.G1909.9 Capsicum annuum HOM05D000021 ORTHO05D000010 2.2e-13 81.3 65 60.0
CAN.G1909.12 Capsicum annuum HOM05D000021 ORTHO05D000010 1.6e-11 75.1 335 27.8
PGSC0003DMG400015283 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.7e-11 74.3 61 60.7
CAN.G1909.13 Capsicum annuum HOM05D000021 ORTHO05D000010 4.5e-11 73.6 65 56.9
CAN.G1909.16 Capsicum annuum HOM05D000021 ORTHO05D000010 5.9e-11 73.2 65 56.9
CAN.G1909.7 Capsicum annuum HOM05D000021 ORTHO05D000010 5.9e-11 73.2 65 55.4
Solyc03g019980.2 Solanum lycopersicum HOM05D000021 ORTHO05D000010 1.3e-10 72.0 60 60.0
Sopen03g029640 Solanum pennellii HOM05D000021 ORTHO05D000010 1.3e-10 72.0 60 60.0
CAN.G1909.10 Capsicum annuum HOM05D000021 ORTHO05D000010 1.7e-10 71.6 65 56.9
Sopen03g029140 Solanum pennellii HOM05D000021 ORTHO05D000010 1.7e-10 71.6 65 55.4
PGSC0003DMG400025635 Solanum tuberosum HOM05D000021 ORTHO05D000010 1.7e-10 71.6 41 82.9
Nitab4.5_0004612g0060 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.8e-10 70.5 65 55.4
Sopen09g026710 Solanum pennellii HOM05D000021 ORTHO05D000010 6.6e-10 69.7 119 42.9
CAN.G1631.4 Capsicum annuum HOM05D000021 ORTHO05D000010 8.6e-10 69.3 61 57.4
PGSC0003DMG400010183 Solanum tuberosum HOM05D000021 ORTHO05D000010 8.6e-10 69.3 65 55.4
Solyc03g098360.2 Solanum lycopersicum HOM05D000021 ORTHO05D000010 1.9e-09 68.2 37 78.4
Solyc03g098400.2 Solanum lycopersicum HOM05D000021 ORTHO05D000010 1.9e-09 68.2 65 52.3
Sed0023988 Sechium edule HOM05D000021 ORTHO05D000010 1.6e-08 65.1 88 42.0
CAN.G1909.11 Capsicum annuum HOM05D000021 ORTHO05D000010 6.1e-08 63.2 64 54.7
Sopen10g025090 Solanum pennellii HOM05D000021 ORTHO05D000010 8.0e-08 62.8 64 53.1
Nitab4.5_0001180g0230 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.8e-07 61.6 65 50.8
Sopen09g026690 Solanum pennellii HOM05D000021 ORTHO05D000010 1.8e-07 61.6 43 69.8
CAN.G1631.1 Capsicum annuum HOM05D000021 ORTHO05D000010 3.0e-07 60.8 47 66.0
Peaxi162Scf00171g00348 Petunia axillaris HOM05D000173 ORTHO05D000010 3.0e-07 60.8 137 36.5
DCAR_007384 Daucus carota HOM05D000021 ORTHO05D000010 4.0e-07 60.5 66 53.0
Sed0000307 Sechium edule HOM05D000021 ORTHO05D000010 4.0e-07 60.5 40 67.5
Solyc09g064960.2 Solanum lycopersicum HOM05D000021 ORTHO05D000010 4.0e-07 60.5 44 68.2
MELO3C029817.2 Cucumis melo HOM05D000021 ORTHO05D000010 5.2e-07 60.1 73 43.8
MELO3C008293.2 Cucumis melo HOM05D000021 ORTHO05D000010 6.8e-07 59.7 73 43.8
CsaV3_6G001780 Cucumis sativus L. HOM05D000021 ORTHO05D000010 6.8e-07 59.7 73 43.8
MBI14_g39025_MAGBIO Magnolia biondii HOM05D000021 ORTHO05D000010 6.8e-07 59.7 72 41.7
Sed0010564 Sechium edule HOM05D000021 ORTHO05D000010 8.9e-07 59.3 42 64.3
Ciclev10018087m.g Citrus clementina HOM05D000021 ORTHO05D000010 1.5e-06 58.5 92 41.3
Duzib106G1858 Durio zibethinus HOM05D000021 ORTHO05D000010 1.5e-06 58.5 117 33.3
Nitab4.5_0001180g0280 Nicotiana tabacum HOM05D000021 ORTHO05D000010 1.5e-06 58.5 142 34.5
vmacro19788 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.5e-06 58.5 88 39.8
Nitab4.5_0004612g0080 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.0e-06 58.2 92 43.5
ClCG11G006210 Citrullus lanatus HOM05D000021 ORTHO05D000010 3.4e-06 57.4 120 30.0
MD04G1110500 Malus domestica HOM05D000021 ORTHO05D000010 3.4e-06 57.4 53 50.9
BcaB03g16482 Brassica carinata HOM05D000021 ORTHO05D000010 5.7e-06 56.6 49 53.1
CiPaw.14G109500 Carya illinoinensis HOM05D000021 ORTHO05D000010 5.7e-06 56.6 94 37.2
PSO017G4011 Papaver somniferum HOM05D000021 ORTHO05D000010 5.7e-06 56.6 50 52.0
CsaV3_6G001790 Cucumis sativus L. HOM05D000021 ORTHO05D000010 7.5e-06 56.2 73 42.5
vmacro02972 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 7.5e-06 56.2 56 48.2
Nitab4.5_0001180g0260 Nicotiana tabacum HOM05D008697 ORTHO05D010866 9.8e-06 55.8 108 38.9


User provided reference genes

Program Settings