Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g064890.4 Solanum lycopersicum HOM05D000257 ORTHO05D009070 2.4e-59 231.9 111 100.0
PGSC0003DMG400000949 Solanum tuberosum HOM05D000257 ORTHO05D009070 1.5e-32 142.9 70 98.6
Sopen09g026590 Solanum pennellii HOM05D000257 ORTHO05D009070 3.3e-32 141.7 70 97.1
Nitab4.5_0002386g0010 Nicotiana tabacum HOM05D000257 ORTHO05D009070 1.6e-23 112.8 70 80.0
Nitab4.5_0001028g0200 Nicotiana tabacum HOM05D000257 ORTHO05D009070 2.1e-23 112.5 70 78.6
CAN.G609.8 Capsicum annuum HOM05D000257 ORTHO05D009070 3.7e-23 111.7 70 80.0
Peaxi162Scf00570g00044 Petunia axillaris HOM05D000257 ORTHO05D009070 7.1e-19 97.4 71 70.4
Migut.D00271 Erythranthe guttata HOM05D000257 ORTHO05D009070 3.9e-17 91.7 61 70.5
unitig_61.g26328 Utricularia gibba HOM05D000257 ORTHO05D009070 1.1e-16 90.1 70 61.4
Lsat_1_v5_gn_8_55920 Lactuca sativa HOM05D000257 ORTHO05D009070 1.1e-14 83.6 70 58.6
SalBow4G1415 Salvia bowleyana HOM05D000257 ORTHO05D009070 1.1e-14 83.6 75 56.0
CSS0034320 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D009070 2.4e-14 82.4 75 60.0
Actinidia09151 Actinidia chinensis HOM05D000257 ORTHO05D009070 3.1e-14 82.0 70 62.9
Hma1.2p1_0628F.1_g191960 Hydrangea macrophylla HOM05D000257 ORTHO05D009070 4.1e-14 81.6 46 82.6
HanXRQChr01g0008411 Helianthus annuus HOM05D000257 ORTHO05D009070 6.9e-14 80.9 62 64.5
Dinv32956 Davidia involucrata HOM05D000257 ORTHO05D009070 9.0e-14 80.5 47 78.7
DCAR_002747 Daucus carota HOM05D000257 ORTHO05D009070 1.2e-13 80.1 70 61.4
SGA_v2.0_scaffold1G00454 Striga asiatica HOM05D000257 ORTHO05D009070 1.5e-13 79.7 47 76.6
TAR362G1035 Trochodendron aralioides HOM05D000257 ORTHO05D009070 1.5e-13 79.7 45 82.2
Oeu028080.1 Olea europaea HOM05D000257 ORTHO05D009070 4.5e-13 78.2 59 64.4
MBI19_g04668_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D009070 5.9e-13 77.8 48 77.1
Psat6g061080 Pisum sativum HOM05D000257 ORTHO05D009070 5.9e-13 77.8 41 87.8
ECA236G1390 Erigeron canadensis HOM05D000257 ORTHO05D009070 7.6e-13 77.4 45 82.2
TPR.G1576 Trifolium pratense HOM05D000257 ORTHO05D009070 1.0e-12 77.0 44 81.8
vmacro06860 Vaccinium macrocarpon HOM05D000257 ORTHO05D009070 1.0e-12 77.0 46 73.9
Atru.chr5.1382 Acer truncatum HOM05D000257 ORTHO05D009070 1.3e-12 76.6 63 63.5
Ca_09770_v3 Cicer arietinum L. HOM05D000257 ORTHO05D009070 1.3e-12 76.6 41 87.8
Phvul.007G169900 Phaseolus vulgaris HOM05D000257 ORTHO05D009070 1.3e-12 76.6 45 77.8
RcHm_v2.0_Chr6g0291451 Rosa chinensis HOM05D000257 ORTHO05D009070 1.3e-12 76.6 73 60.3
CiPaw.07G093700 Carya illinoinensis HOM05D000257 ORTHO05D009070 2.2e-12 75.9 44 81.8
FvH4_2g23842 Fragaria vesca HOM05D000257 ORTHO05D009070 2.2e-12 75.9 40 90.0
FAN24G1533 Fragaria x ananassa HOM05D000257 ORTHO05D009070 2.2e-12 75.9 40 90.0
FAN27G3161 Fragaria x ananassa HOM05D000257 ORTHO05D009070 2.2e-12 75.9 40 90.0
Thecc.01G223800 Theobroma cacao HOM05D000257 ORTHO05D009070 2.2e-12 75.9 49 79.6
vmacro02554 Vaccinium macrocarpon HOM05D000257 ORTHO05D009070 2.2e-12 75.9 64 57.8
Glyma.10G025100 Glycine max HOM05D000257 ORTHO05D009070 3.8e-12 75.1 41 85.4
Medtr1g032040 Medicago truncatula HOM05D000257 ORTHO05D009070 5.0e-12 74.7 41 85.4
Medtr1g032380 Medicago truncatula HOM05D000257 ORTHO05D009070 5.0e-12 74.7 41 85.4
Cfa006113 Carpinus fangiana HOM05D000257 ORTHO05D009070 6.5e-12 74.3 64 60.9
COL.COLO4_15662 Corchorus olitorius HOM05D000257 ORTHO05D009070 6.5e-12 74.3 49 77.6
VMungo0720G1308 Vigna mungo HOM05D000257 ORTHO05D009070 6.5e-12 74.3 48 72.9
CARHR173400 Cardamine hirsuta HOM05D000257 ORTHO05D009070 8.5e-12 73.9 70 58.6
Ciclev10020353m.g Citrus clementina HOM05D000257 ORTHO05D009070 8.5e-12 73.9 40 87.5
PGR054G0001 Punica granatum HOM05D000257 ORTHO05D009070 1.1e-11 73.6 46 73.9
PGR119G1369 Punica granatum HOM05D000257 ORTHO05D009070 1.1e-11 73.6 46 73.9
TWI14G0398 Tripterygium wilfordii HOM05D000257 ORTHO05D009070 1.1e-11 73.6 40 85.0
Ah.08g213010 Amaranthus hybridus HOM05D000257 ORTHO05D009070 1.4e-11 73.2 47 72.3
Eucgr.B03977 Eucalyptus grandis HOM05D000257 ORTHO05D009070 1.4e-11 73.2 41 78.0
ClCG09G006920 Citrullus lanatus HOM05D000257 ORTHO05D009070 1.9e-11 72.8 46 73.9
EL10Ac7g17211 Beta vulgaris HOM05D000257 ORTHO05D009070 2.5e-11 72.4 47 72.3
Duzib138G1860 Durio zibethinus HOM05D000257 ORTHO05D009070 2.5e-11 72.4 48 77.1
Gohir.A07G157500 Gossypium hirsutum HOM05D000257 ORTHO05D009070 2.5e-11 72.4 49 75.5
Medtr1g072550 Medicago truncatula HOM05D000257 ORTHO05D009070 2.5e-11 72.4 40 85.0
THA.LOC104817550 Tarenaya hassleriana HOM05D000257 ORTHO05D009070 2.5e-11 72.4 40 82.5
Haze_04737 Corylus avellana HOM05D000257 ORTHO05D009070 3.2e-11 72.0 64 60.9
Prupe.8G243800 Prunus persica HOM05D000257 ORTHO05D009070 3.2e-11 72.0 41 82.9
Sed0001813 Sechium edule HOM05D000257 ORTHO05D009070 3.2e-11 72.0 46 71.7
CsaV3_7G028630 Cucumis sativus L. HOM05D000257 ORTHO05D009070 4.2e-11 71.6 46 76.1
Lj5g0019479 Lotus japonicus HOM05D000257 ORTHO05D009070 4.2e-11 71.6 41 80.5
Nn1g02126 Nelumbo nucifera HOM05D000257 ORTHO05D009070 4.2e-11 71.6 42 83.3
Carub.0005s2975 Capsella rubella HOM05D000257 ORTHO05D009070 5.5e-11 71.2 40 80.0
QL12p022373 Quercus lobata HOM05D000257 ORTHO05D009070 5.5e-11 71.2 65 61.5
AT3G63090 Arabidopsis thaliana HOM05D000257 ORTHO05D009070 9.4e-11 70.5 70 52.9
MD11G1289000 Malus domestica HOM05D000257 ORTHO05D009070 9.4e-11 70.5 41 82.9
Manes.05G074100 Manihot esculenta HOM05D000257 ORTHO05D009070 9.4e-11 70.5 41 82.9
Sc24g0004140 Simmondsia chinensis HOM05D000257 ORTHO05D009070 9.4e-11 70.5 47 70.2
AL5G45920 Arabidopsis lyrata HOM05D000257 ORTHO05D009070 1.2e-10 70.1 41 78.0
arahy.Tifrunner.gnm1.ann1.AZF37F Arachis hypogaea HOM05D000257 ORTHO05D009070 1.2e-10 70.1 39 82.1
arahy.Tifrunner.gnm1.ann1.YN028F Arachis hypogaea HOM05D000257 ORTHO05D009070 1.2e-10 70.1 39 82.1
MELO3C015855.2 Cucumis melo HOM05D000257 ORTHO05D009070 1.2e-10 70.1 67 56.7
Thhalv10006016m.g Eutrema salsugineum HOM05D000257 ORTHO05D009070 1.2e-10 70.1 45 71.1
Gorai.001G187800 Gossypium raimondii HOM05D000257 ORTHO05D009070 1.2e-10 70.1 49 73.5
MD03G1268200 Malus domestica HOM05D000257 ORTHO05D009070 1.6e-10 69.7 78 52.6
BcaC07g40788 Brassica carinata HOM05D000257 ORTHO05D009070 2.1e-10 69.3 41 78.0
C08p37810 Brassica napus HOM05D000257 ORTHO05D009070 2.1e-10 69.3 41 78.0
BolC8t51360H Brassica oleracea HOM05D000257 ORTHO05D009070 2.1e-10 69.3 41 78.0
PSO384G1280 Papaver somniferum HOM05D000257 ORTHO05D009070 2.1e-10 69.3 42 76.2
Gohir.D07G163900 Gossypium hirsutum HOM05D000257 ORTHO05D009070 2.7e-10 68.9 49 71.4
Aa31LG10G16930 Aethionema arabicum HOM05D000257 ORTHO05D009070 3.6e-10 68.6 40 77.5
AUR62036811 Chenopodium quinoa HOM05D000257 ORTHO05D009070 3.6e-10 68.6 47 63.8
Aqoxy5G00676 Aquilegia oxysepala HOM05D000257 ORTHO05D009070 6.1e-10 67.8 46 73.9
A09p54910 Brassica napus HOM05D000257 ORTHO05D009070 6.1e-10 67.8 40 77.5
BraA09t40901Z Brassica rapa HOM05D000257 ORTHO05D009070 6.1e-10 67.8 40 77.5
CDE02G4780 Ceratophyllum demersum HOM05D000328 ORTHO05D009070 6.1e-10 67.8 37 81.1
FAN15G1925 Fragaria x ananassa HOM05D000257 ORTHO05D009070 6.1e-10 67.8 40 77.5
FAN15G3545 Fragaria x ananassa HOM05D000257 ORTHO05D009070 6.1e-10 67.8 40 77.5
Sp5g00440 Schrenkiella parvula HOM05D000257 ORTHO05D009070 6.1e-10 67.8 40 77.5
PSO339G2340 Papaver somniferum HOM05D000257 ORTHO05D009070 7.9e-10 67.4 41 75.6
Sabra02G0167500 Salix brachista HOM05D000257 ORTHO05D009070 7.9e-10 67.4 67 55.2
AUR62039897 Chenopodium quinoa HOM05D000257 ORTHO05D009070 1.4e-09 66.6 42 71.4
Potri.002G220000 Populus trichocarpa HOM05D000257 ORTHO05D009070 1.4e-09 66.6 40 75.0
CANSAT35G0265 Cannabis sativa HOM05D000257 ORTHO05D009070 2.3e-09 65.9 53 66.0
SHI15488 Sapria himalayana HOM05D000257 ORTHO05D009070 2.3e-09 65.9 45 68.9
BcaC08g45267 Brassica carinata HOM05D000257 ORTHO05D009070 3.0e-09 65.5 44 70.5
BcaC08g45260 Brassica carinata HOM05D000257 ORTHO05D009070 3.9e-09 65.1 40 72.5
ATR0994G012 Amborella trichopoda HOM05D000257 ORTHO05D009070 1.5e-08 63.2 45 64.4
BolC6t38029H Brassica oleracea HOM05D000257 ORTHO05D009070 1.5e-08 63.2 37 75.7
C06p28610 Brassica napus HOM05D000257 ORTHO05D009070 1.9e-08 62.8 40 72.5
SEGI_00945 Sequoiadendron giganteum HOM05D000257 ORTHO05D009070 7.4e-08 60.8 40 62.5


User provided reference genes

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