Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g064645.1 Solanum lycopersicum HOM05D000002 ORTHO05D392289 3.8e-34 147.5 70 100.0
Solyc06g048825.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.9e-09 65.5 48 64.6
Solyc10g050513.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.2e-08 62.8 45 64.4
Sopen06g016600 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 62.4 45 66.7
Solyc12g036485.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.1e-08 62.0 40 72.5
Sopen01g008270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-08 62.0 40 72.5
Sopen01g027760 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-08 62.0 40 72.5
Sopen08g004420 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-08 62.0 40 72.5
Solyc05g005265.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.7e-08 61.6 40 72.5
Sopen04g011660 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-08 61.2 40 72.5
Sopen08g020480 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-08 60.5 51 54.9
Solyc01g020353.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.0e-08 60.1 40 65.0
Sopen01g015280 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-08 60.1 40 65.0
Solyc02g062045.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.0e-07 59.7 40 67.5
Solyc09g065885.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.0e-07 59.7 40 67.5
Solyc10g084125.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.0e-07 59.7 40 67.5
Solyc12g011233.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.0e-07 59.7 40 67.5
Sopen00g009190 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 59.7 40 67.5
Sopen02g013970 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 59.7 47 57.4
Sopen05g013620 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 59.7 40 67.5
Sopen05g016200 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 59.7 40 67.5
Sopen06g015400 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-07 59.7 40 67.5
Sopen04g032230 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-07 59.3 40 67.5
Sopen12g022120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-07 59.3 40 67.5
Solyc02g014035.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.8e-07 58.9 40 70.0
Solyc10g074824.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.3e-07 58.5 40 65.0
Sopen04g021610 Solanum pennellii HOM05D000002 ORTHO05D000047 2.3e-07 58.5 40 62.5
Sopen07g026660 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-07 58.5 40 65.0
Solyc04g049075.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.0e-07 58.2 48 58.3
Solyc04g064805.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.0e-07 58.2 40 67.5
Sopen01g006730 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 58.2 40 67.5
Sopen11g005050 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 58.2 40 65.0
Solyc04g007855.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.0e-07 57.8 40 65.0
Solyc08g068717.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.0e-07 57.8 40 65.0
Sopen04g014070 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-07 57.8 40 65.0
Sopen05g029420 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-07 57.8 40 65.0
Sopen08g010470 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-07 57.8 40 65.0
Sopen11g021040 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-07 57.8 40 65.0
Solyc02g071383.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.2e-07 57.4 40 60.0
Solyc05g016347.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.2e-07 57.4 40 60.0
Sopen10g026910 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-07 57.4 37 67.6
Sopen11g010840 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-07 57.4 40 65.0
CAN.G582.9 Capsicum annuum HOM05D001396 ORTHO05D000493 6.7e-07 57.0 40 65.0
Sopen00g008960 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 57.0 40 65.0
Sopen02g024020 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 57.0 40 65.0
Sopen02g030140 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 57.0 40 65.0
Sopen04g006690 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 57.0 40 65.0
Sopen08g020580 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 57.0 40 60.0
Sopen11g023480 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 57.0 40 62.5
Sopen12g007480 Solanum pennellii HOM05D000002 ORTHO05D000001 6.7e-07 57.0 40 60.0
Solyc03g044837.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 65.0
Solyc03g117845.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 65.0
Solyc06g048713.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 62.5
Solyc06g060195.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 62.5
Solyc09g083165.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 62.5
Solyc10g047657.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 65.0
Sopen00g013390 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 65.0
Sopen01g029130 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 62.5
Sopen07g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 65.0
Sopen08g019300 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-07 56.6 40 62.5
Sopen02g015340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 40 62.5
Sopen03g032880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 40 60.0
Sopen04g002160 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 40 60.0
Sopen04g032600 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 40 62.5
Sopen05g008960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 40 60.0
Sopen10g026960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 40 65.0
Sopen12g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.2 40 60.0
Solyc04g050675.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.5e-06 55.8 40 62.5
Solyc05g015651.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.5e-06 55.8 40 62.5
Sopen09g030510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 55.8 40 62.5
Sopen12g016570 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 55.8 40 62.5
Sopen12g016830 Solanum pennellii HOM05D000006 ORTHO05D000695 1.5e-06 55.8 40 62.5
Solyc01g065987.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.0e-06 55.5 40 60.0
Solyc07g150134.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.0e-06 55.5 44 59.1
Sopen05g031100 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.5 40 62.5
Sopen08g016650 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 55.5 40 60.0
Solyc04g071135.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.6e-06 55.1 40 60.0
Solyc04g073953.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.6e-06 55.1 40 62.5
Solyc08g074655.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.6e-06 55.1 40 60.0
Solyc12g042855.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.6e-06 55.1 40 60.0
Solyc03g034055.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 60.0
Solyc05g026485.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 62.5
Solyc09g018285.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 60.0
Sopen01g050110 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 62.5
Sopen03g015540 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 62.5
Sopen04g029960 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 62.5
Sopen06g015860 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 62.5
Sopen06g016560 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 62.5
Sopen07g027700 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 60.0
Sopen08g020600 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 60.0
Sopen09g028090 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 60.0
Sopen09g029790 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 62.5
Sopen10g027860 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 60.0
Sopen12g022440 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 54.7 40 60.0
Solyc03g078627.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.4e-06 54.3 36 72.2
Solyc09g015065.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.4e-06 54.3 40 62.5
Solyc12g010655.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.4e-06 54.3 29 82.8
Sopen05g010320 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 54.3 40 60.0
Sopen07g008010 Solanum pennellii HOM05D000002 ORTHO05D000001 4.4e-06 54.3 40 57.5
Solyc04g150146.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.7e-06 53.9 40 60.0
Solyc05g013617.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.7e-06 53.9 40 60.0
Solyc10g048005.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.7e-06 53.9 40 60.0
Solyc12g040642.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.7e-06 53.9 40 57.5
Sopen01g017010 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 53.9 37 62.2
Sopen04g006340 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-06 53.9 37 62.2
FvH4_4g14842 Fragaria vesca HOM05D000002 ORTHO05D000001 7.5e-06 53.5 40 60.0
Sopen00g009270 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-06 53.5 40 55.0
Sopen07g025390 Solanum pennellii HOM05D000006 ORTHO05D000695 7.5e-06 53.5 40 60.0
Sopen09g021050 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-06 53.5 40 60.0
Sopen12g032940 Solanum pennellii HOM05D000002 ORTHO05D000001 7.5e-06 53.5 40 55.0
FvH4_4g08311 Fragaria vesca HOM05D000002 ORTHO05D000001 9.7e-06 53.1 40 60.0
Solyc07g062715.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 9.7e-06 53.1 40 60.0
Solyc09g011125.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 9.7e-06 53.1 40 62.5


User provided reference genes

Program Settings