Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 6.9e-156 554.3 358 100.0
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 3.2e-153 545.4 358 98.0
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 6.7e-143 511.1 361 93.9
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 1.3e-90 337.4 253 95.3
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 2.8e-88 329.7 342 74.3
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 3.0e-87 326.2 371 70.9
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 2.6e-46 190.3 287 47.7
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 2.0e-38 164.1 292 41.8
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 1.4e-36 157.9 301 41.5
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 3.5e-35 153.3 298 38.6
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 1.0e-34 151.8 306 40.2
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 7.4e-33 145.6 286 42.3
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 1.6e-32 144.4 310 39.0
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 3.7e-32 143.3 300 40.7
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 4.8e-32 142.9 175 84.6
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 8.2e-32 142.1 281 38.4
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 8.2e-32 142.1 286 39.2
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 1.8e-31 141.0 306 40.8
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 2.4e-31 140.6 286 40.2
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 4.0e-31 139.8 286 39.2
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 6.9e-31 139.0 303 40.9
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 1.5e-30 137.9 307 39.7
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 2.6e-30 137.1 289 38.8
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 2.6e-30 137.1 277 40.1
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 4.5e-30 136.3 302 37.7
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 3.8e-29 133.3 284 39.8
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 4.9e-29 132.9 275 38.9
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 6.5e-29 132.5 296 36.5
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 8.4e-29 132.1 285 40.7
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 1.1e-28 131.7 300 34.3
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 1.4e-28 131.3 299 38.8
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 1.4e-28 131.3 320 37.5
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 1.4e-28 131.3 311 35.7
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 1.9e-28 131.0 294 41.2
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 1.6e-27 127.9 279 40.1
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 2.7e-27 127.1 296 38.2
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 2.7e-27 127.1 289 38.1
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 3.5e-27 126.7 296 37.5
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 3.5e-27 126.7 286 38.1
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 4.6e-27 126.3 289 38.4
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 6.0e-27 125.9 284 37.3
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 6.0e-27 125.9 295 37.6
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 7.9e-27 125.6 305 38.7
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 1.3e-26 124.8 275 38.9
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 3.0e-26 123.6 255 39.2
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 3.9e-26 123.2 296 37.8
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 5.1e-26 122.9 285 36.5
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 5.1e-26 122.9 294 38.4
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 8.7e-26 122.1 279 38.0
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 1.1e-25 121.7 277 36.5
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 2.5e-25 120.6 254 39.4
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 2.5e-25 120.6 296 39.2
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 3.3e-25 120.2 283 38.2
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 7.4e-25 119.0 293 37.2
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 3.7e-24 116.7 289 36.0
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 8.2e-24 115.5 307 34.2
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 9.0e-23 112.1 299 37.8
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 2.0e-22 110.9 297 37.0
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 2.6e-22 110.5 284 36.3
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 3.4e-22 110.2 299 37.8
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 3.4e-22 110.2 299 37.8
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 3.4e-22 110.2 301 34.9
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 3.4e-22 110.2 304 33.2
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 3.4e-22 110.2 303 35.0
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 5.9e-22 109.4 302 33.8
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 1.7e-21 107.8 279 37.6
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 5.0e-21 106.3 297 36.7
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 6.5e-21 105.9 274 33.2
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 8.5e-21 105.5 292 32.5
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 2.5e-20 104.0 290 35.2
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 3.2e-20 103.6 282 35.5
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 7.2e-20 102.4 301 35.5
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 9.4e-20 102.1 302 31.5
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 6.1e-19 99.4 287 35.5
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 6.1e-19 99.4 302 33.4
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 2.3e-18 97.4 295 33.2
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 3.0e-18 97.1 89 61.8
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 2.0e-17 94.4 294 35.4
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 2.5e-17 94.0 306 32.4
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 1.7e-16 91.3 337 33.5
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 6.3e-16 89.4 208 35.1
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 4.1e-15 86.7 294 34.4
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 4.1e-15 86.7 274 33.6
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 2.0e-14 84.3 278 34.9
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 2.6e-14 84.0 304 32.6
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 4.5e-14 83.2 289 31.5
MSTRG.21461 Avicennia marina HOM05D007706 ORTHO05D009593 1.3e-13 81.6 77 57.1
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 2.9e-13 80.5 232 31.9
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 2.9e-13 80.5 159 42.8
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 8.5e-13 79.0 288 30.2
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 8.5e-13 79.0 287 31.4
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 2.5e-12 77.4 309 31.7
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 3.2e-12 77.0 283 31.4
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 4.2e-12 76.6 295 31.2
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 7.2e-12 75.9 312 31.1
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 1.6e-11 74.7 84 52.4
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 4.7e-11 73.2 280 31.8
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.0e-10 72.0 119 41.2
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 1.4e-10 71.6 298 30.5
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 2.3e-10 70.9 305 31.1
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 6.7e-10 69.3 295 30.8
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.5e-09 68.2 279 30.5
TAR622G1049 Trochodendron aralioides HOM05D027966 ORTHO05D025782 4.4e-09 66.6 198 29.3
CAN.G524.13 Capsicum annuum HOM05D006910 ORTHO05D008937 9.7e-09 65.5 125 36.0
ClCG06G001430 Citrullus lanatus HOM05D007706 ORTHO05D009593 1.3e-08 65.1 302 29.8
COL.COLO4_15971 Corchorus olitorius HOM05D006910 ORTHO05D008937 2.8e-08 63.9 305 28.5
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 8.2e-08 62.4 54 55.6
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 8.2e-08 62.4 82 43.9
Actinidia39932 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.8e-07 61.2 43 60.5
Sabra10G0041700 Salix brachista HOM05D006910 ORTHO05D008937 1.8e-07 61.2 40 70.0
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 7.0e-07 59.3 44 61.4
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 7.0e-07 59.3 281 30.6
Eucgr.H00126 Eucalyptus grandis HOM05D006910 ORTHO05D008937 1.2e-06 58.5 40 65.0
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 1.2e-06 58.5 42 57.1
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 2.0e-06 57.8 77 46.8
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 2.0e-06 57.8 41 58.5
Sp6g24210 Schrenkiella parvula HOM05D001903 ORTHO05D001847 2.0e-06 57.8 201 28.4
CiPaw.01G177500 Carya illinoinensis HOM05D006910 ORTHO05D008937 5.9e-06 56.2 41 58.5
MD13G1221900 Malus domestica HOM05D006910 ORTHO05D008937 5.9e-06 56.2 36 69.4


User provided reference genes

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