Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2018.8 Capsicum annuum HOM05D008505 ORTHO05D010735 2.7e-17 90.9 44 100.0
CAN.G3365.2 Capsicum annuum HOM05D008505 ORTHO05D010735 2.7e-17 90.9 44 100.0
CAN.G35999.1 Capsicum annuum HOM05D008505 ORTHO05D010735 2.7e-17 90.9 44 100.0
CAN.G89.2 Capsicum annuum HOM05D008505 ORTHO05D010735 2.7e-17 90.9 44 100.0
Migut.D01431 Erythranthe guttata HOM05D008505 ORTHO05D010735 2.7e-17 90.9 44 100.0
Solyc09g064400.2 Solanum lycopersicum HOM05D008505 ORTHO05D010735 2.7e-17 90.9 44 100.0
Solyc01g067760.1 Solanum lycopersicum HOM05D008505 ORTHO05D010735 7.7e-17 89.4 43 100.0
CAN.G452.6 Capsicum annuum HOM05D008505 ORTHO05D010735 1.3e-16 88.6 44 97.7
PGR111G0077 Punica granatum HOM05D008505 ORTHO05D010735 1.3e-16 88.6 44 97.7
ATCG00630 Arabidopsis thaliana HOM05D008505 ORTHO05D010735 2.9e-16 87.4 44 95.5
CAN.G1595.9 Capsicum annuum HOM05D008505 ORTHO05D010735 2.9e-16 87.4 44 95.5
CARHR282140 Cardamine hirsuta HOM05D008505 ORTHO05D010735 2.9e-16 87.4 44 95.5
Glyma.12G232400 Glycine max HOM05D008505 ORTHO05D010735 2.9e-16 87.4 44 95.5
Glyma.15G126100 Glycine max HOM05D008505 ORTHO05D010735 2.9e-16 87.4 44 95.5
Phvul.002G090522 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 2.9e-16 87.4 44 95.5
Phvul.009G188366 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 2.9e-16 87.4 44 95.5
Gorai.009G128900 Gossypium raimondii HOM05D008505 ORTHO05D010735 5.0e-16 86.7 43 93.0
DCAR_032504 Daucus carota HOM05D008505 ORTHO05D010735 6.5e-16 86.3 42 97.6
CAN.G1739.9 Capsicum annuum HOM05D008505 ORTHO05D010735 1.1e-15 85.5 44 93.2
PSO548G0021 Papaver somniferum HOM05D008505 ORTHO05D010735 1.9e-15 84.7 44 90.9
arahy.Tifrunner.gnm1.ann1.DJ5Q02 Arachis hypogaea HOM05D008505 ORTHO05D010735 3.2e-15 84.0 42 95.2
Gohir.A12G229532 Gossypium hirsutum HOM05D008505 ORTHO05D010735 5.5e-15 83.2 42 95.2
LjContig00318g0023250 Lotus japonicus HOM05D008505 ORTHO05D010735 7.2e-15 82.8 44 90.9
Gorai.005G108800 Gossypium raimondii HOM05D008505 ORTHO05D010735 9.4e-15 82.4 43 88.4
Nitab4.5_0011882g0050 Nicotiana tabacum HOM05D008505 ORTHO05D010735 9.4e-15 82.4 42 92.9
C04p42980 Brassica napus HOM05D008505 ORTHO05D010735 1.6e-14 81.6 44 88.6
BolC4t25868H Brassica oleracea HOM05D008505 ORTHO05D010735 1.6e-14 81.6 44 88.6
A06p23140 Brassica napus HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
C02p43560 Brassica napus HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
C06p22980 Brassica napus HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BolC9t53162H Brassica oleracea HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BolSC29t60474H Brassica oleracea HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BolSC29t60595H Brassica oleracea HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BolSC35t60655H Brassica oleracea HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BolSC47t61089H Brassica oleracea HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BraA06t25417Z Brassica rapa HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BraSC138t45568Z Brassica rapa HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BraSC25t45858Z Brassica rapa HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
BraSC58t46429Z Brassica rapa HOM05D008505 ORTHO05D010735 3.6e-14 80.5 42 92.9
Gohir.D12G108100 Gossypium hirsutum HOM05D008505 ORTHO05D010735 4.7e-14 80.1 42 92.9
BolC2t08913H Brassica oleracea HOM05D008505 ORTHO05D010735 1.4e-13 78.6 43 88.4
BraSC103t45457Z Brassica rapa HOM05D008505 ORTHO05D010735 3.4e-12 73.9 41 87.8
BraSC103t45474Z Brassica rapa HOM05D008505 ORTHO05D010735 3.4e-12 73.9 42 88.1
Gorai.007G307300 Gossypium raimondii HOM05D008505 ORTHO05D010735 5.7e-12 73.2 42 85.7
Potri.003G067501 Populus trichocarpa HOM05D008505 ORTHO05D010735 7.5e-12 72.8 42 81.0
Gohir.D06G113625 Gossypium hirsutum HOM05D008505 ORTHO05D010735 1.7e-11 71.6 41 85.4
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 2.2e-11 71.2 38 86.8
CiPaw.11G114400 Carya illinoinensis HOM05D008505 ORTHO05D010735 4.8e-11 70.1 42 81.0
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 1.2e-09 65.5 35 88.6
BolSC35t60742H Brassica oleracea HOM05D008505 ORTHO05D010735 6.5e-08 59.7 31 90.3
Hund19833 Selenicereus undatus HOM05D008505 ORTHO05D010735 1.9e-07 58.2 37 78.4
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 4.2e-07 57.0 35 74.3
Nn3g18711 Nelumbo nucifera HOM05D008505 ORTHO05D010735 7.2e-07 56.2 28 92.9
arahy.Tifrunner.gnm1.ann1.94BM57 Arachis hypogaea HOM05D011000 ORTHO05D083736 8.0e-06 52.8 30 86.7


User provided reference genes

Program Settings