Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g062990.2 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.3e-70 269.6 141 100.0
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.2e-47 193.4 141 71.6
PGSC0003DMG400035210 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.9e-34 147.9 126 61.9
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.0e-33 144.8 145 57.2
Solyc02g005145.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 5.5e-32 141.4 114 64.9
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 1.8e-30 136.3 141 50.4
PGSC0003DMG400043570 Solanum tuberosum HOM05D003911 ORTHO05D002175 9.1e-27 124.0 105 64.8
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-17 91.7 145 39.3
CAN.G400.14 Capsicum annuum HOM05D003911 ORTHO05D001773 1.4e-16 90.1 107 46.7
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-16 87.4 145 37.9
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-15 86.3 145 37.2
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-14 81.3 146 39.0
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.5e-13 80.1 146 37.0
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 2.6e-13 79.3 81 48.1
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-13 78.6 140 37.1
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-13 78.6 146 37.0
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-13 77.4 143 35.7
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-12 76.6 146 37.0
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-12 75.9 146 34.2
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-12 75.1 122 38.5
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.8e-11 73.2 145 34.5
Nitab4.5_0000079g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-11 71.6 133 35.3
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 7.0e-11 71.2 146 36.3
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-11 70.9 146 33.6
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-10 69.3 146 34.2
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-10 68.6 147 36.1
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-10 67.8 146 35.6
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-09 67.0 145 33.1
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-09 66.6 142 33.1
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-09 66.6 146 33.6
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-09 66.6 141 34.0
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-09 66.6 146 33.6
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.2e-09 66.2 146 34.9
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.9e-09 65.9 140 35.7
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.8e-09 65.5 146 32.2
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.8e-09 65.5 147 34.0
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-09 65.1 141 34.0
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-09 65.1 146 33.6
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-09 64.7 146 31.5
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-09 64.7 146 34.9
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-08 63.9 140 33.6
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-08 63.9 111 34.2
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-08 63.5 146 32.2
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-08 63.5 146 32.2
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-08 63.2 145 30.3
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.5e-08 62.8 146 33.6
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-08 62.4 146 32.2
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-08 62.0 146 32.9
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-08 62.0 146 31.5
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-08 62.0 146 32.9
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-08 62.0 134 33.6
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-08 61.6 113 38.1
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-08 61.6 146 30.8
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-08 60.8 144 31.9
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 9.4e-08 60.8 146 31.5
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.1e-07 59.7 144 31.2
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 59.7 146 30.8
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-07 58.5 145 28.3
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-07 58.5 127 32.3
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-07 58.5 143 32.9
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 4.7e-07 58.5 146 32.2
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 4.7e-07 58.5 145 30.3
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-07 58.2 145 32.4
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 6.1e-07 58.2 146 30.8
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 6.1e-07 58.2 146 32.2
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-07 57.8 144 31.9
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-07 57.8 132 33.3
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-07 57.8 146 32.2
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-06 57.4 115 33.9
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.0 145 32.4
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-06 56.2 137 32.1
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-06 56.2 146 31.5
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-06 55.5 106 36.8
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.7e-06 54.7 140 31.4
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.8e-06 54.3 145 29.7


User provided reference genes

Program Settings