Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g061900.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.3e-59 231.5 117 100.0
Sopen09g024970 Solanum pennellii HOM05D000002 ORTHO05D000001 7.2e-54 213.8 116 94.0
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-52 208.4 116 91.4
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-52 206.8 116 90.5
Sopen03g023270 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-52 206.8 116 90.5
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-52 206.8 116 90.5
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-52 206.8 116 90.5
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-52 206.8 116 90.5
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-52 206.8 116 90.5
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-52 206.8 116 90.5
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 8.8e-52 206.8 116 90.5
Solyc06g082797.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.8e-50 201.1 116 87.9
Solyc11g021010.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.1e-49 198.4 116 87.1
Solyc05g015654.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 9.1e-49 196.8 116 87.1
Sopen10g015910 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-43 177.6 116 77.6
Sopen08g012970 Solanum pennellii HOM05D000002 ORTHO05D000001 8.0e-21 104.0 59 86.4
Sopen02g014900 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-19 97.8 96 57.3
Atru.chr2.2995 Acer truncatum HOM05D000002 ORTHO05D000001 6.8e-12 74.3 82 48.8
Ah.11g039570 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.2e-11 73.6 90 35.6
arahy.Tifrunner.gnm1.ann1.8J635S Arachis hypogaea HOM05D000002 ORTHO05D000001 1.2e-11 73.6 92 40.2
Psat4g210200 Pisum sativum HOM05D018610 ORTHO05D000001 3.4e-11 72.0 98 42.9
Solyc05g050070.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 5.8e-11 71.2 103 33.0
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-09 67.0 80 41.2
Psat7g120640 Pisum sativum HOM05D018610 ORTHO05D000001 3.2e-09 65.5 97 41.2
TAR175G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-08 62.8 78 37.2
Atru.chr4.210 Acer truncatum HOM05D000002 ORTHO05D000001 2.7e-08 62.4 82 42.7
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.3e-07 59.3 78 37.2
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-07 59.3 105 35.2
Nitab4.5_0003288g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.1e-06 57.0 103 34.0
Nitab4.5_0003591g0050 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.1e-06 57.0 103 33.0
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.0 108 29.6
Atru.chr2.3036 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-06 56.6 117 30.8
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 2.5e-06 55.8 81 34.6
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 2.5e-06 55.8 109 29.4
RcHm_v2.0_Chr1g0326351 Rosa chinensis HOM05D000067 ORTHO05D000097 3.3e-06 55.5 105 30.5
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 4.3e-06 55.1 96 32.3
PSO423G0202 Papaver somniferum HOM05D000973 ORTHO05D000001 4.3e-06 55.1 100 31.0
FvH4_5g09401 Fragaria vesca HOM05D000002 ORTHO05D000001 5.6e-06 54.7 104 31.7
FvH4_5g09403 Fragaria vesca HOM05D000002 ORTHO05D000001 5.6e-06 54.7 79 35.4
Nitab4.5_0000184g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.6e-06 54.7 51 56.9
PSO040G0055 Papaver somniferum HOM05D000973 ORTHO05D000001 5.6e-06 54.7 100 31.0
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 7.3e-06 54.3 103 31.1
TPR.G33758 Trifolium pratense HOM05D001505 ORTHO05D000001 7.3e-06 54.3 76 35.5
C09p34990 Brassica napus HOM05D000002 ORTHO05D000001 9.5e-06 53.9 107 34.6
CANSAT54G0642 Cannabis sativa HOM05D000002 ORTHO05D000001 9.5e-06 53.9 79 34.2


User provided reference genes

Program Settings