Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 1.8e-122 442.6 223 100.0
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 1.7e-120 436.0 223 98.7
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 4.3e-108 394.8 224 89.3
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.2e-78 297.0 213 73.7
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.1e-70 269.6 226 64.6
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 2.7e-65 252.7 223 60.1
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 3.3e-63 245.7 220 59.5
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 2.7e-41 172.9 227 47.1
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 7.3e-39 164.9 233 42.1
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 1.2e-38 164.1 232 44.0
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 1.2e-38 164.1 222 47.7
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.2e-36 157.5 238 44.5
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 2.6e-36 156.4 222 45.5
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 2.9e-35 152.9 233 44.6
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 7.1e-34 148.3 220 43.2
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 7.1e-34 148.3 235 40.9
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 7.8e-33 144.8 238 37.8
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 6.6e-32 141.7 145 56.6
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.1e-31 141.0 238 36.1
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 1.9e-31 140.2 233 38.6
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 7.3e-31 138.3 205 41.5
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 1.3e-30 137.5 208 41.8
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 3.6e-30 136.0 228 39.9
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 4.8e-30 135.6 231 39.4
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 6.2e-30 135.2 242 35.1
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 6.2e-30 135.2 229 38.0
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 2.4e-29 133.3 225 41.3
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 3.1e-29 132.9 235 40.0
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 6.9e-29 131.7 181 45.9
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 6.9e-29 131.7 219 39.7
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 9.0e-29 131.3 230 37.8
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 9.0e-29 131.3 179 45.3
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 9.0e-29 131.3 153 47.1
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.2e-28 131.0 278 34.9
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.5e-28 130.6 228 39.0
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 2.6e-28 129.8 224 36.6
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 4.5e-28 129.0 228 38.6
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 4.5e-28 129.0 177 46.9
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 5.8e-28 128.6 219 39.3
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 5.8e-28 128.6 230 35.2
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 7.6e-28 128.3 229 39.3
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 7.6e-28 128.3 226 38.5
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 9.9e-28 127.9 229 38.9
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 9.9e-28 127.9 228 38.2
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 1.3e-27 127.5 229 38.9
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 1.3e-27 127.5 227 39.2
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 2.2e-27 126.7 180 43.9
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 2.9e-27 126.3 180 44.4
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 2.9e-27 126.3 218 39.4
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 3.8e-27 125.9 219 38.4
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 4.9e-27 125.6 218 43.6
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 4.9e-27 125.6 153 49.7
PGSC0003DMG403023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 6.4e-27 125.2 72 88.9
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 6.4e-27 125.2 226 35.8
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 1.9e-26 123.6 231 39.4
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 2.4e-26 123.2 220 39.5
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 2.4e-26 123.2 228 38.2
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 2.4e-26 123.2 221 38.0
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 4.2e-26 122.5 104 60.6
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 7.1e-26 121.7 145 51.0
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 7.1e-26 121.7 236 36.0
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 9.3e-26 121.3 144 50.0
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 1.6e-25 120.6 189 39.2
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 2.7e-25 119.8 249 36.5
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 4.6e-25 119.0 229 38.0
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 6.0e-25 118.6 228 38.2
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 1.3e-24 117.5 230 35.7
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.8e-24 117.1 207 44.4
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 3.0e-24 116.3 249 35.7
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 3.0e-24 116.3 150 46.0
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 3.9e-24 115.9 156 41.0
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 6.7e-24 115.2 231 33.3
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 8.7e-24 114.8 171 41.5
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 8.7e-24 114.8 224 37.1
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 8.7e-24 114.8 226 38.5
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 1.1e-23 114.4 228 36.4
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 4.3e-23 112.5 153 41.8
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 4.3e-23 112.5 94 60.6
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 4.3e-23 112.5 135 48.1
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 5.6e-23 112.1 225 39.1
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 7.4e-23 111.7 220 35.5
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 1.3e-22 110.9 225 36.9
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 6.2e-22 108.6 102 53.9
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 8.1e-22 108.2 155 41.3
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 1.4e-21 107.5 197 37.6
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 5.3e-21 105.5 221 35.3
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 5.3e-21 105.5 221 35.3
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 1.2e-20 104.4 159 40.3
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.2e-20 104.4 233 36.9
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.5e-20 104.0 226 36.3
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 5.8e-20 102.1 143 44.1
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 1.3e-19 100.9 231 31.6
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-19 100.9 101 49.5
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 2.2e-19 100.1 222 37.4
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 4.9e-19 99.0 240 35.4
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 1.9e-18 97.1 236 34.3
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 2.3e-16 90.1 73 64.4
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 5.1e-16 89.0 86 54.7
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 3.1e-13 79.7 78 44.9
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 1.2e-12 77.8 120 38.3
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 6.0e-09 65.5 205 26.8
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 1.5e-07 60.8 51 47.1
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 2.8e-06 56.6 139 34.5
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 8.2e-06 55.1 93 29.0


User provided reference genes

Program Settings