Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g059710.2 Solanum lycopersicum HOM05D001299 ORTHO05D022155 6.2e-32 140.2 72 100.0
Solyc01g097460.3 Solanum lycopersicum HOM05D001299 ORTHO05D001985 9.4e-12 73.2 41 90.2
Sopen01g041130 Solanum pennellii HOM05D001299 ORTHO05D001985 9.4e-12 73.2 41 90.2
PGSC0003DMG400019448 Solanum tuberosum HOM05D001299 ORTHO05D001985 9.4e-12 73.2 41 90.2
Sopen09g022880 Solanum pennellii HOM05D001299 ORTHO05D022155 1.2e-11 72.8 53 75.5
CAN.G134.110 Capsicum annuum HOM05D001299 ORTHO05D001985 2.7e-11 71.6 41 85.4
CAN.G637.61 Capsicum annuum HOM05D001299 ORTHO05D022155 1.4e-10 69.3 41 85.4
HanXRQChr12g0366161 Helianthus annuus HOM05D001299 ORTHO05D001985 3.0e-10 68.2 38 86.8
Lsat_1_v5_gn_8_34821 Lactuca sativa HOM05D001299 ORTHO05D001985 3.0e-10 68.2 38 86.8
Nitab4.5_0004469g0070 Nicotiana tabacum HOM05D001299 ORTHO05D001985 3.0e-10 68.2 41 82.9
Nitab4.5_0005582g0010 Nicotiana tabacum HOM05D001299 ORTHO05D001985 3.0e-10 68.2 41 82.9
CAN.G978.2 Capsicum annuum HOM05D001299 ORTHO05D022155 3.9e-10 67.8 43 83.7
Dinv04803 Davidia involucrata HOM05D001299 ORTHO05D001985 3.9e-10 67.8 41 80.5
PSO063G6007 Papaver somniferum HOM05D001299 ORTHO05D001985 5.1e-10 67.4 38 86.8
PSO170G1495 Papaver somniferum HOM05D001299 ORTHO05D001985 5.1e-10 67.4 38 86.8
PSO591G0484 Papaver somniferum HOM05D001299 ORTHO05D001985 5.1e-10 67.4 38 86.8
PSO832G2935 Papaver somniferum HOM05D001299 ORTHO05D001985 5.1e-10 67.4 38 86.8
Peaxi162Scf00282g00110 Petunia axillaris HOM05D001299 ORTHO05D001985 5.1e-10 67.4 41 80.5
PSO063G5077 Papaver somniferum HOM05D001299 ORTHO05D001985 6.7e-10 67.0 38 84.2
PSO832G3483 Papaver somniferum HOM05D001299 ORTHO05D001985 6.7e-10 67.0 38 84.2
TAR636G3567 Trochodendron aralioides HOM05D001299 ORTHO05D001985 8.8e-10 66.6 41 80.5
Oeu002659.5 Olea europaea HOM05D001299 ORTHO05D001985 1.1e-09 66.2 41 78.0
TAR636G0103 Trochodendron aralioides HOM05D001299 ORTHO05D001985 1.1e-09 66.2 40 80.0
DCAR_011702 Daucus carota HOM05D001299 ORTHO05D001985 2.5e-09 65.1 38 84.2
ECA233G2989 Erigeron canadensis HOM05D001299 ORTHO05D001985 2.5e-09 65.1 35 88.6
Hma1.2p1_0079F.1_g041140 Hydrangea macrophylla HOM05D001299 ORTHO05D001985 3.3e-09 64.7 41 78.0
PGR004G1834 Punica granatum HOM05D001299 ORTHO05D001985 3.3e-09 64.7 38 81.6
CsaV3_2G004240 Cucumis sativus L. HOM05D001299 ORTHO05D001985 5.7e-09 63.9 38 76.3
Manes.08G132900 Manihot esculenta HOM05D001299 ORTHO05D001985 5.7e-09 63.9 38 81.6
Sed0009091 Sechium edule HOM05D001299 ORTHO05D001985 5.7e-09 63.9 38 76.3
TAR362G1204 Trochodendron aralioides HOM05D001299 ORTHO05D001985 5.7e-09 63.9 41 75.6
MBI05_g12590_MAGBIO Magnolia biondii HOM05D001299 ORTHO05D001985 7.4e-09 63.5 40 75.0
vmacro18971 Vaccinium macrocarpon HOM05D001299 ORTHO05D001985 7.4e-09 63.5 41 75.6
Prupe.6G341500 Prunus persica HOM05D001299 ORTHO05D001985 9.7e-09 63.2 38 78.9
Rhsim05G0161100 Rhododendron simsii HOM05D001299 ORTHO05D001985 9.7e-09 63.2 41 73.2
MELO3C004370.2 Cucumis melo HOM05D001299 ORTHO05D001985 1.3e-08 62.8 38 73.7
HPP92_017648 Vanilla planifolia HOM05D001299 ORTHO05D001985 1.3e-08 62.8 41 73.2
CAN.G99.4 Capsicum annuum HOM05D001299 ORTHO05D001985 2.2e-08 62.0 39 76.9
Migut.N03150 Erythranthe guttata HOM05D001299 ORTHO05D001985 2.2e-08 62.0 41 73.2
Nn1g02426 Nelumbo nucifera HOM05D001299 ORTHO05D001985 2.2e-08 62.0 41 73.2
Aqoxy2G03452 Aquilegia oxysepala HOM05D001299 ORTHO05D001985 2.8e-08 61.6 41 68.3
Manes.09G154000 Manihot esculenta HOM05D001299 ORTHO05D001985 2.8e-08 61.6 38 76.3
ATR0763G220 Amborella trichopoda HOM05D001299 ORTHO05D001985 3.7e-08 61.2 41 73.2
Lj7A580T62 Lonicera japonica HOM05D001299 ORTHO05D001985 3.7e-08 61.2 41 73.2
CAN.G15.12 Capsicum annuum HOM05D001299 ORTHO05D022155 4.8e-08 60.8 49 69.4
CAN.G15.13 Capsicum annuum HOM05D001299 ORTHO05D022155 4.8e-08 60.8 49 69.4
Potri.005G052000 Populus trichocarpa HOM05D001299 ORTHO05D001985 4.8e-08 60.8 38 78.9
Potri.013G039400 Populus trichocarpa HOM05D001299 ORTHO05D001985 4.8e-08 60.8 38 78.9
Sabra05G0045700 Salix brachista HOM05D001299 ORTHO05D001985 6.3e-08 60.5 37 78.4
SGA_v2.0_scaffold12G05982 Striga asiatica HOM05D001299 ORTHO05D001985 6.3e-08 60.5 41 73.2
ClCG02G016530 Citrullus lanatus HOM05D001299 ORTHO05D001985 8.2e-08 60.1 38 71.1
MD04G1222500 Malus domestica HOM05D001299 ORTHO05D001985 8.2e-08 60.1 38 76.3
Sopen04g017870 Solanum pennellii HOM05D001299 ORTHO05D001985 8.2e-08 60.1 40 77.5
Os07g0176900 Oryza sativa ssp. japonica HOM05D001299 ORTHO05D001985 1.1e-07 59.7 38 76.3
Atru.chr2.797 Acer truncatum HOM05D001299 ORTHO05D001985 1.4e-07 59.3 39 74.4
Eucgr.B02112 Eucalyptus grandis HOM05D001299 ORTHO05D001985 1.4e-07 59.3 38 76.3
MD12G1238600 Malus domestica HOM05D001299 ORTHO05D001985 1.4e-07 59.3 38 76.3
TWI12G1397 Tripterygium wilfordii HOM05D001299 ORTHO05D001985 1.8e-07 58.9 38 73.7
Cfa006447 Carpinus fangiana HOM05D001299 ORTHO05D001985 2.4e-07 58.5 38 73.7
CDE07G1771 Ceratophyllum demersum HOM05D001299 ORTHO05D001985 2.4e-07 58.5 38 71.1
Haze_04346 Corylus avellana HOM05D001299 ORTHO05D001985 2.4e-07 58.5 38 73.7
Oeu027463.2 Olea europaea HOM05D001299 ORTHO05D001985 3.1e-07 58.2 37 75.7
QL03p025013 Quercus lobata HOM05D001299 ORTHO05D001985 3.1e-07 58.2 37 73.0
SalBow8G1349 Salvia bowleyana HOM05D001299 ORTHO05D001985 3.1e-07 58.2 41 65.9
CANSAT54G2431 Cannabis sativa HOM05D001299 ORTHO05D001985 4.1e-07 57.8 38 73.7
Ciclev10002135m.g Citrus clementina HOM05D001299 ORTHO05D001985 4.1e-07 57.8 39 74.4
RcHm_v2.0_Chr3g0451421 Rosa chinensis HOM05D001299 ORTHO05D001985 4.1e-07 57.8 38 73.7
Actinidia30936 Actinidia chinensis HOM05D001299 ORTHO05D001985 5.3e-07 57.4 40 62.5
SEGI_08408 Sequoiadendron giganteum HOM05D001299 ORTHO05D001985 5.3e-07 57.4 38 73.7
Sc06g0003720 Simmondsia chinensis HOM05D001299 ORTHO05D001985 5.3e-07 57.4 39 71.8
Ah.06g192220 Amaranthus hybridus HOM05D001299 ORTHO05D001985 6.9e-07 57.0 38 73.7
ATR0665G255 Amborella trichopoda HOM05D001299 ORTHO05D001985 6.9e-07 57.0 41 65.9
EL10Ac4g09113 Beta vulgaris HOM05D001299 ORTHO05D001985 6.9e-07 57.0 38 73.7
FvH4_6g03160 Fragaria vesca HOM05D001299 ORTHO05D001985 6.9e-07 57.0 38 73.7
FAN05G3118 Fragaria x ananassa HOM05D001299 ORTHO05D001985 6.9e-07 57.0 38 73.7
FAN05G5636 Fragaria x ananassa HOM05D001299 ORTHO05D001985 6.9e-07 57.0 38 73.7
FAN09G2166 Fragaria x ananassa HOM05D001299 ORTHO05D001985 6.9e-07 57.0 38 73.7
Actinidia05772 Actinidia chinensis HOM05D001299 ORTHO05D001985 9.1e-07 56.6 39 64.1
FAN14G1011 Fragaria x ananassa HOM05D001299 ORTHO05D001985 9.1e-07 56.6 37 73.0
Phvul.006G100600 Phaseolus vulgaris HOM05D001299 ORTHO05D001985 9.1e-07 56.6 41 68.3
VMungo0540G0098 Vigna mungo HOM05D001299 ORTHO05D001985 9.1e-07 56.6 41 68.3
CBR_g28662 Chara braunii HOM05D001299 ORTHO05D001985 1.5e-06 55.8 38 68.4
Medtr7g114900 Medicago truncatula HOM05D001299 ORTHO05D001985 1.5e-06 55.8 38 73.7
Glyma.03G246300 Glycine max HOM05D001299 ORTHO05D001985 2.0e-06 55.5 38 71.1
Lalb_Chr15g0076831 Lupinus albus HOM05D001299 ORTHO05D001985 2.0e-06 55.5 38 71.1
Mapoly0213s0005 Marchantia polymorpha HOM05D001299 ORTHO05D001985 2.6e-06 55.1 37 70.3
SMO367G0722 Selaginella moellendorffii HOM05D001299 ORTHO05D001985 2.6e-06 55.1 38 71.1
TWI12G0936 Tripterygium wilfordii HOM05D001299 ORTHO05D001985 2.6e-06 55.1 38 68.4
AUR62001026 Chenopodium quinoa HOM05D001299 ORTHO05D001985 3.4e-06 54.7 45 60.0
AUR62004926 Chenopodium quinoa HOM05D001299 ORTHO05D001985 3.4e-06 54.7 45 60.0
Ca_09414_v3 Cicer arietinum L. HOM05D001299 ORTHO05D001985 3.4e-06 54.7 38 71.1
Duzib106G1319 Durio zibethinus HOM05D001299 ORTHO05D001985 3.4e-06 54.7 38 71.1
Psat7g065880 Pisum sativum HOM05D001299 ORTHO05D001985 3.4e-06 54.7 38 71.1
TPR.G6999 Trifolium pratense HOM05D001299 ORTHO05D001985 3.4e-06 54.7 38 71.1
BcaB04g21346 Brassica carinata HOM05D001299 ORTHO05D001985 4.5e-06 54.3 38 71.1
BcaNung06423 Brassica carinata HOM05D001299 ORTHO05D001985 4.5e-06 54.3 38 71.1
BraA05t22975Z Brassica rapa HOM05D001299 ORTHO05D001985 4.5e-06 54.3 38 71.1
COL.COLO4_15308 Corchorus olitorius HOM05D001299 ORTHO05D001985 4.5e-06 54.3 38 71.1
FAN02G4386 Fragaria x ananassa HOM05D001299 ORTHO05D001985 4.5e-06 54.3 34 76.5
Gohir.A08G214500 Gossypium hirsutum HOM05D001299 ORTHO05D001985 4.5e-06 54.3 38 71.1
A05p42750 Brassica napus HOM05D001851 ORTHO05D002237 5.9e-06 53.9 37 70.3
Gohir.A11G253800 Gossypium hirsutum HOM05D001299 ORTHO05D001985 5.9e-06 53.9 38 68.4
Gohir.D08G231700 Gossypium hirsutum HOM05D001299 ORTHO05D001985 5.9e-06 53.9 38 68.4
Gohir.D11G263700 Gossypium hirsutum HOM05D001299 ORTHO05D001985 5.9e-06 53.9 38 68.4
Gorai.004G246100 Gossypium raimondii HOM05D001299 ORTHO05D001985 5.9e-06 53.9 38 68.4
Gorai.007G283700 Gossypium raimondii HOM05D001299 ORTHO05D001985 5.9e-06 53.9 38 68.4
Lj1g0018965 Lotus japonicus HOM05D001299 ORTHO05D001985 5.9e-06 53.9 38 68.4
Thecc.05G286600 Theobroma cacao HOM05D001299 ORTHO05D001985 5.9e-06 53.9 38 68.4
unitig_37.g12635 Utricularia gibba HOM05D001299 ORTHO05D001985 5.9e-06 53.9 41 63.4
Duzib177G0313 Durio zibethinus HOM05D001299 ORTHO05D001985 7.7e-06 53.5 38 71.1
Thhalv10004764m.g Eutrema salsugineum HOM05D001299 ORTHO05D001985 7.7e-06 53.5 38 71.1
Sabra13G0036800 Salix brachista HOM05D001299 ORTHO05D001985 7.7e-06 53.5 34 73.5
SHI18377 Sapria himalayana HOM05D001299 ORTHO05D001985 7.7e-06 53.5 55 52.7


User provided reference genes

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