Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g057900.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.4e-58 228.0 139 100.0
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 3.9e-30 135.2 68 94.1
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.0e-23 111.3 68 72.1
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-21 105.5 68 69.1
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.1e-20 100.9 136 57.4
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-19 97.8 157 51.6
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-18 94.0 157 50.3
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.8e-17 92.0 157 49.0
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.9e-17 91.7 157 48.4
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 1.5e-13 80.1 64 56.2
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 7.3e-13 77.8 61 54.1
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 4.8e-12 75.1 47 72.3
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.1e-12 74.3 66 51.5
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-11 73.9 46 80.4
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 2.4e-11 72.8 72 48.6
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.9e-11 71.2 48 62.5
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-10 68.9 61 55.7
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.4e-10 68.6 51 56.9
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 9.9e-10 67.4 62 45.2
PGSC0003DMG400015985 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.9e-10 67.4 54 59.3
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-09 67.0 59 49.2
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.9e-09 65.9 59 52.5
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 4.9e-09 65.1 61 52.5
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 4.9e-09 65.1 61 52.5
SalBow5G4417 Salvia bowleyana HOM05D004072 ORTHO05D007163 6.4e-09 64.7 62 51.6
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-08 63.9 157 41.4
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.4e-08 63.5 73 42.5
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-08 63.5 130 49.2
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-08 62.8 38 63.2
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 3.2e-08 62.4 60 43.3
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 3.2e-08 62.4 60 43.3
EL10Ac6g14504 Beta vulgaris HOM05D000107 ORTHO05D007163 4.2e-08 62.0 60 41.7
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.2e-08 62.0 48 54.2
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 5.4e-08 61.6 62 38.7
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 9.3e-08 60.8 59 42.4
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 9.3e-08 60.8 59 42.4
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 9.3e-08 60.8 59 42.4
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 9.3e-08 60.8 59 42.4
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 9.3e-08 60.8 59 42.4
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.3e-08 60.8 39 59.0
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-07 60.5 190 36.8
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 2.1e-07 59.7 59 40.7
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.1e-07 59.7 31 90.3
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-07 59.3 56 46.4
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 4.6e-07 58.5 71 38.0
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 4.6e-07 58.5 71 38.0
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 7.9e-07 57.8 56 42.9
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-07 57.8 57 43.9
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 7.9e-07 57.8 56 44.6
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 1.0e-06 57.4 57 40.4
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 1.0e-06 57.4 59 40.7
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.0e-06 57.4 56 42.9
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-06 56.6 56 42.9
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-06 56.6 32 84.4
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 2.3e-06 56.2 56 41.1
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 3.0e-06 55.8 56 41.1
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 3.0e-06 55.8 48 50.0
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.9e-06 55.5 39 51.3
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 5.1e-06 55.1 32 81.2
Hund19819 Selenicereus undatus HOM05D009146 ORTHO05D011649 5.1e-06 55.1 59 45.8
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.6e-06 54.7 152 44.7


User provided reference genes

Program Settings