Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g057830.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.4e-43 178.3 82 100.0
Solyc09g056080.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 6.0e-31 137.1 82 78.0
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 7.8e-31 136.7 80 78.8
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 1.3e-30 136.0 81 77.8
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 1.3e-30 136.0 81 76.5
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 2.3e-30 135.2 81 76.5
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 3.0e-30 134.8 81 76.5
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 3.0e-30 134.8 81 76.5
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.0e-30 134.8 81 75.3
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 3.0e-30 134.8 81 75.3
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 5.1e-30 134.0 81 76.5
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 6.6e-30 133.7 81 75.3
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 6.6e-30 133.7 81 75.3
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 6.6e-30 133.7 81 75.3
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 6.6e-30 133.7 81 75.3
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 1.1e-29 132.9 80 76.2
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 1.1e-29 132.9 81 76.5
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.9e-29 132.1 81 75.3
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 1.9e-29 132.1 81 75.3
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 1.9e-29 132.1 81 75.3
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 2.5e-29 131.7 81 75.3
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 2.5e-29 131.7 81 75.3
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 2.5e-29 131.7 81 75.3
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 2.5e-29 131.7 81 75.3
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 3.3e-29 131.3 81 75.3
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 5.6e-29 130.6 81 74.1
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 5.6e-29 130.6 81 75.3
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 5.6e-29 130.6 81 75.3
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 5.6e-29 130.6 81 74.1
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 7.3e-29 130.2 81 75.3
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 7.3e-29 130.2 81 75.3
BraSC77t46636Z Brassica rapa HOM05D001560 ORTHO05D003613 7.3e-29 130.2 81 75.3
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 7.3e-29 130.2 81 75.3
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 9.6e-29 129.8 81 75.3
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 9.6e-29 129.8 81 75.3
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 9.6e-29 129.8 81 75.3
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.3e-28 129.4 81 75.3
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 2.8e-28 128.3 81 74.1
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 2.8e-28 128.3 81 74.1
Nitab4.5_0002739g0100 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.6e-28 127.9 71 81.7
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 3.6e-28 127.9 81 74.1
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 4.8e-28 127.5 81 71.6
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.8e-28 127.5 81 72.8
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.8e-28 127.5 81 72.8
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 8.1e-28 126.7 81 74.1
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-27 124.4 81 71.6
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 6.9e-27 123.6 80 72.5
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 9.0e-27 123.2 81 71.6
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 9.0e-27 123.2 81 72.8
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-26 122.5 81 71.6
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 2.0e-26 122.1 80 71.2
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-26 121.3 81 71.6
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-26 121.3 81 71.6
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-26 121.3 81 71.6
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.4e-26 121.3 81 70.4
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 7.6e-26 120.2 81 71.6
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-25 119.4 81 69.1
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 1.3e-25 119.4 82 70.7
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-25 119.4 81 69.1
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-25 119.4 81 69.1
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-25 119.4 81 70.4
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.9e-25 118.2 69 76.8
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 4.9e-25 117.5 81 69.1
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-25 117.1 81 70.4
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 8.4e-25 116.7 81 69.1
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.4e-24 115.9 68 76.5
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-24 115.2 81 69.1
TPR.G33726 Trifolium pratense HOM05D001560 ORTHO05D003613 2.4e-24 115.2 78 65.4
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-24 114.4 81 67.9
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-24 114.4 81 67.9
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-24 114.4 81 67.9
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 7.1e-24 113.6 81 66.7
Solyc09g056310.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 9.3e-24 113.2 78 69.2
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 3.9e-22 107.8 81 65.4
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 7.4e-21 103.6 60 75.0
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-20 101.3 71 67.6
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-19 98.2 61 75.4
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 4.0e-19 97.8 80 60.0
Nitab4.5_0008337g0090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 9.0e-19 96.7 59 72.9
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-18 96.3 60 73.3
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-18 95.1 60 73.3
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 4.5e-18 94.4 73 61.6
Nitab4.5_0001152g1040 Nicotiana tabacum HOM05D001560 ORTHO05D003613 5.8e-18 94.0 71 64.8
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 5.8e-18 94.0 60 71.7
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 1.0e-17 93.2 69 66.7
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.3e-17 92.8 48 83.3
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-17 92.8 60 71.7
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 8.4e-17 90.1 60 68.3
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 3.2e-16 88.2 63 66.7
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-15 85.9 55 70.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-15 84.3 56 71.4
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 9.6e-13 76.6 41 82.9
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 4.8e-12 74.3 47 72.3
Sopen12g024770 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-12 73.9 40 77.5
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.8e-11 72.4 47 70.2
Nitab4.5_0000844g0250 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.4e-11 72.0 37 81.1
Peaxi162Scf00122g00065 Petunia axillaris HOM05D001560 ORTHO05D003613 5.3e-11 70.9 48 64.6
Solyc05g018790.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.0e-10 68.9 40 75.0
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-10 68.6 80 48.8
Ah.01g011760 Amaranthus hybridus HOM05D001560 ORTHO05D003613 4.5e-10 67.8 37 78.4
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 1.7e-09 65.9 38 71.1
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 2.2e-09 65.5 71 40.8
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.9e-09 65.1 44 63.6
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 5.0e-09 64.3 40 72.5
SHI34995 Sapria himalayana HOM05D001560 ORTHO05D010994 9.3e-08 60.1 40 70.0
ECA246G4254 Erigeron canadensis HOM05D001560 ORTHO05D003613 1.6e-07 59.3 35 77.1
QL10p038886 Quercus lobata HOM05D003302 ORTHO05D003785 2.3e-06 55.5 70 35.7
TAR629G3501 Trochodendron aralioides HOM05D003302 ORTHO05D003785 3.0e-06 55.1 70 37.1
MD05G1284200 Malus domestica HOM05D003302 ORTHO05D003785 3.9e-06 54.7 70 35.7
Sopen01g054090 Solanum pennellii HOM05D003302 ORTHO05D003785 3.9e-06 54.7 70 38.6
Solyc01g112025.1 Solanum lycopersicum HOM05D003302 ORTHO05D003785 5.1e-06 54.3 70 37.1
FvH4_3g05620 Fragaria vesca HOM05D003302 ORTHO05D003785 6.7e-06 53.9 70 32.9
FAN11G3285 Fragaria x ananassa HOM05D003302 ORTHO05D003785 6.7e-06 53.9 70 32.9
FAN21G1953 Fragaria x ananassa HOM05D003302 ORTHO05D003785 6.7e-06 53.9 70 32.9
SHI15040 Sapria himalayana HOM05D000743 ORTHO05D003613 6.7e-06 53.9 39 64.1
Hma1.2p1_0053F.1_g030960 Hydrangea macrophylla HOM05D003302 ORTHO05D003785 8.7e-06 53.5 70 38.6


User provided reference genes

Program Settings