Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g056110.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.5e-71 272.7 137 100.0
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 4.8e-41 171.4 221 50.7
Solyc00g500104.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.9e-39 164.5 214 50.0
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 5.9e-39 164.5 221 48.9
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 8.5e-30 134.0 194 46.9
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 8.5e-30 134.0 194 46.9
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 8.5e-30 134.0 194 46.9
PGSC0003DMG400023071 Solanum tuberosum HOM05D002660 ORTHO05D011807 2.7e-28 129.0 92 72.8
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 6.3e-25 117.9 210 37.6
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 1.8e-24 116.3 207 37.7
Solyc11g063540.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.6e-23 113.2 70 82.9
Solyc11g030850.1 Solanum lycopersicum HOM05D002660 ORTHO05D011807 3.5e-23 112.1 90 71.1
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 4.2e-21 105.1 175 43.4
CAN.G841.4 Capsicum annuum HOM05D002660 ORTHO05D003902 1.8e-19 99.8 204 36.8
CAN.G1126.7 Capsicum annuum HOM05D002660 ORTHO05D011807 5.2e-19 98.2 81 64.2
CAN.G1159.14 Capsicum annuum HOM05D002660 ORTHO05D011807 5.2e-19 98.2 81 64.2
CAN.G200.4 Capsicum annuum HOM05D002660 ORTHO05D011807 5.2e-19 98.2 81 64.2
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 8.8e-19 97.4 86 52.3
CAN.G1001.30 Capsicum annuum HOM05D002660 ORTHO05D003902 8.8e-19 97.4 89 56.2
Nitab4.5_0000172g1900 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.3e-17 93.6 87 54.0
Solyc00g142160.1 Solanum lycopersicum HOM05D002660 ORTHO05D011807 1.3e-17 93.6 80 61.2
Nitab4.5_0001796g0150 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.2e-17 92.8 84 56.0
Nitab4.5_0027526g0010 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.8e-17 92.4 94 52.1
CAN.G134.22 Capsicum annuum HOM05D002660 ORTHO05D011807 3.7e-17 92.0 81 60.5
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 5.9e-15 84.7 167 39.5
Sopen05g012620 Solanum pennellii HOM05D002660 ORTHO05D003902 5.9e-15 84.7 51 84.3
Nitab4.5_0000592g0110 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.9e-14 82.4 84 51.2
Nitab4.5_0001788g0190 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.9e-13 79.7 72 54.2
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.6e-12 76.6 175 32.0
PGSC0003DMG400006470 Solanum tuberosum HOM05D002660 ORTHO05D003902 2.1e-12 76.3 66 63.6
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.8e-11 73.2 174 31.6
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 2.3e-11 72.8 175 31.4
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 2.8e-09 65.9 88 45.5
Nitab4.5_0000172g0830 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.8e-09 65.9 92 44.6
CAN.G1.4 Capsicum annuum HOM05D002660 ORTHO05D003902 4.8e-09 65.1 129 36.4
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 8.3e-09 64.3 73 42.5
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 1.4e-08 63.5 92 42.4
CAN.G70.3 Capsicum annuum HOM05D002660 ORTHO05D003902 2.0e-07 59.7 86 41.9
Nitab4.5_0009709g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.0e-07 59.7 52 57.7
Sed0020463 Sechium edule HOM05D002660 ORTHO05D003902 2.7e-07 59.3 84 44.0
Nitab4.5_0004300g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 7.7e-07 57.8 52 55.8
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.3e-06 56.2 45 66.7
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.3e-06 56.2 45 66.7
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 5.0e-06 55.1 45 64.4
CAN.G26.9 Capsicum annuum HOM05D002660 ORTHO05D003902 6.6e-06 54.7 71 49.3
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 6.6e-06 54.7 45 64.4


User provided reference genes

Program Settings