Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g055820.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.5e-86 320.9 153 100.0
CAN.G1195.7 Capsicum annuum HOM05D000045 ORTHO05D000611 2.3e-23 112.8 81 66.7
CAN.G915.12 Capsicum annuum HOM05D000045 ORTHO05D000067 3.2e-17 92.4 89 51.7
Sopen07g007600 Solanum pennellii HOM05D000045 ORTHO05D013823 1.3e-15 87.0 79 57.0
Peaxi162Scf00106g00017 Petunia axillaris HOM05D000045 ORTHO05D000067 2.8e-13 79.3 65 55.4
Nitab4.5_0002201g0020 Nicotiana tabacum HOM05D012241 ORTHO05D013823 2.3e-12 76.3 62 58.1
Peaxi162Scf01514g00020 Petunia axillaris HOM05D000045 ORTHO05D000067 2.3e-12 76.3 79 41.8
Solyc11g051000.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.2e-12 75.1 59 66.1
Thecc.04G026200 Theobroma cacao HOM05D000045 ORTHO05D000067 5.2e-12 75.1 90 42.2
Duzib147G0739 Durio zibethinus HOM05D000045 ORTHO05D000067 1.5e-11 73.6 90 41.1
Ciclev10014295m.g Citrus clementina HOM05D000045 ORTHO05D000067 4.4e-11 72.0 90 40.0
Gohir.D09G032200 Gossypium hirsutum HOM05D000045 ORTHO05D000067 4.4e-11 72.0 92 41.3
Gorai.006G037100 Gossypium raimondii HOM05D000045 ORTHO05D000067 4.4e-11 72.0 92 41.3
COL.COLO4_20854 Corchorus olitorius HOM05D000045 ORTHO05D000611 7.6e-11 71.2 82 40.2
Gohir.A09G032100 Gossypium hirsutum HOM05D000045 ORTHO05D000067 9.9e-11 70.9 92 41.3
Dinv08765 Davidia involucrata HOM05D000045 ORTHO05D000611 1.7e-10 70.1 83 39.8
MBI09_g36554_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 1.7e-10 70.1 186 28.5
EL10Ac9g20884 Beta vulgaris HOM05D000045 ORTHO05D004773 2.2e-10 69.7 200 26.0
Peaxi162Scf00671g00061 Petunia axillaris HOM05D000045 ORTHO05D000611 2.2e-10 69.7 67 46.3
QL02p073271 Quercus lobata HOM05D000045 ORTHO05D000067 2.2e-10 69.7 90 42.2
GSVIVG01032951001 Vitis vinifera HOM05D000045 ORTHO05D000611 2.2e-10 69.7 64 53.1
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.9e-10 69.3 90 40.0
Manes.15G155500 Manihot esculenta HOM05D000045 ORTHO05D000067 3.8e-10 68.9 90 41.1
Psat1g083280 Pisum sativum HOM05D000045 ORTHO05D000067 3.8e-10 68.9 88 42.0
COL.COLO4_06875 Corchorus olitorius HOM05D000045 ORTHO05D000067 6.4e-10 68.2 82 40.2
Dinv04075 Davidia involucrata HOM05D000045 ORTHO05D000611 8.4e-10 67.8 83 38.6
COL.COLO4_29258 Corchorus olitorius HOM05D000045 ORTHO05D009825 1.1e-09 67.4 90 37.8
TPR.G7496 Trifolium pratense HOM05D000045 ORTHO05D000067 1.9e-09 66.6 89 40.4
CiPaw.04G032300 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.1e-09 65.5 89 39.3
Glyma.05G072100 Glycine max HOM05D000045 ORTHO05D000067 4.1e-09 65.5 89 39.3
MD01G1197600 Malus domestica HOM05D000045 ORTHO05D000067 4.1e-09 65.5 99 33.3
CANSAT64G1822 Cannabis sativa HOM05D000045 ORTHO05D000067 5.4e-09 65.1 89 38.2
RcHm_v2.0_Chr1g0376821 Rosa chinensis HOM05D000045 ORTHO05D000067 5.4e-09 65.1 66 43.9
Ciclev10018794m.g Citrus clementina HOM05D000045 ORTHO05D000067 7.1e-09 64.7 87 35.6
MSTRG.24059 Avicennia marina HOM05D000045 ORTHO05D000067 9.2e-09 64.3 90 40.0
FvH4_7g29092 Fragaria vesca HOM05D000045 ORTHO05D000067 9.2e-09 64.3 66 43.9
Dinv28471 Davidia involucrata HOM05D000045 ORTHO05D000067 1.2e-08 63.9 80 42.5
Phvul.004G058200 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 1.2e-08 63.9 89 37.1
Rhsim08G0046500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.2e-08 63.9 89 38.2
Ca_11048_v3 Cicer arietinum L. HOM05D000373 ORTHO05D003579 1.6e-08 63.5 142 31.0
Manes.06G144900 Manihot esculenta HOM05D000045 ORTHO05D000067 1.6e-08 63.5 85 36.5
COL.COLO4_20853 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.7e-08 62.8 61 44.3
Atru.chr5.514 Acer truncatum HOM05D000045 ORTHO05D000067 3.5e-08 62.4 153 28.8
Lj2g0023561 Lotus japonicus HOM05D000045 ORTHO05D000067 4.6e-08 62.0 89 37.1
TPR.G34286 Trifolium pratense HOM05D000045 ORTHO05D000067 4.6e-08 62.0 98 35.7
MBI15_g02579_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 7.8e-08 61.2 141 31.2
CAN.G95.8 Capsicum annuum HOM05D000045 ORTHO05D013823 1.0e-07 60.8 65 47.7
QL06p047907 Quercus lobata HOM05D000045 ORTHO05D000067 1.0e-07 60.8 98 37.8
Cfa008288 Carpinus fangiana HOM05D000045 ORTHO05D000067 1.3e-07 60.5 86 36.0
MBI15_g04617_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 2.3e-07 59.7 188 25.5
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 2.3e-07 59.7 87 37.9
Thecc.03G171700 Theobroma cacao HOM05D000045 ORTHO05D000067 5.1e-07 58.5 63 42.9
Rhsim02G0126700 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.6e-07 58.2 79 38.0
Nn6g35453 Nelumbo nucifera HOM05D000170 ORTHO05D000159 8.6e-07 57.8 66 42.4
CiPaw.03G103400 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.1e-06 57.4 85 36.5
COL.COLO4_04948 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.1e-06 57.4 61 42.6
Migut.H00048 Erythranthe guttata HOM05D000045 ORTHO05D000067 1.1e-06 57.4 96 35.4
Rhsim02G0114200 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.1e-06 57.4 145 29.0
FvH4_2g38071 Fragaria vesca HOM05D000045 ORTHO05D000067 1.5e-06 57.0 61 42.6
Prupe.2G291000 Prunus persica HOM05D000045 ORTHO05D000067 1.5e-06 57.0 49 51.0
CSS0008641 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-06 56.6 82 40.2
Duzib205G0811 Durio zibethinus HOM05D000045 ORTHO05D000067 1.9e-06 56.6 63 41.3
LjContig00238g0008568 Lotus japonicus HOM05D000045 ORTHO05D000067 1.9e-06 56.6 61 39.3
Rhsim02G0233700 Rhododendron simsii HOM05D000045 ORTHO05D004773 1.9e-06 56.6 63 39.7
RhsimUnG0160600 Rhododendron simsii HOM05D000045 ORTHO05D004773 1.9e-06 56.6 63 39.7
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-06 56.2 78 42.3
CAN.G915.13 Capsicum annuum HOM05D012241 ORTHO05D013823 2.5e-06 56.2 39 61.5
Glyma.10G238500 Glycine max HOM05D000045 ORTHO05D000067 2.5e-06 56.2 65 41.5
RhsimUnG0130200 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.5e-06 56.2 79 36.7
CDE07G0644 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 3.3e-06 55.8 179 22.3
Phvul.007G067000 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 3.3e-06 55.8 63 39.7
Rhsim08G0140300 Rhododendron simsii HOM05D000045 ORTHO05D004773 3.3e-06 55.8 63 39.7
Thhalv10021958m.g Eutrema salsugineum HOM05D000045 ORTHO05D000067 4.3e-06 55.5 63 38.1
TPR.G17425 Trifolium pratense HOM05D000045 ORTHO05D000067 4.3e-06 55.5 70 41.4
Lalb_Chr09g0328211 Lupinus albus HOM05D000045 ORTHO05D000067 5.6e-06 55.1 62 40.3
HPP92_009461 Vanilla planifolia HOM05D000045 ORTHO05D000067 7.3e-06 54.7 88 35.2
Atru.chr12.1477 Acer truncatum HOM05D000045 ORTHO05D000067 9.6e-06 54.3 67 41.8
Atru.chr3.2441 Acer truncatum HOM05D000045 ORTHO05D000067 9.6e-06 54.3 63 41.3
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.6e-06 54.3 83 38.6
CSS0040930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.6e-06 54.3 79 40.5
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.6e-06 54.3 83 38.6
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.6e-06 54.3 71 42.3
CiPaw.09G035500 Carya illinoinensis HOM05D000045 ORTHO05D000067 9.6e-06 54.3 76 40.8
PSO063G1714 Papaver somniferum HOM05D000045 ORTHO05D000067 9.6e-06 54.3 83 37.3


User provided reference genes

Program Settings