Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 1.7e-106 390.6 459 100.0
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 9.3e-97 358.2 459 96.9
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 2.6e-38 164.1 490 73.9
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 1.2e-32 145.2 75 96.0
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 2.6e-30 137.5 336 86.9
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 3.4e-30 137.1 333 84.4
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 4.4e-22 110.2 395 72.7
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.3e-21 108.6 138 44.9
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 9.2e-20 102.4 138 41.3
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 1.2e-19 102.1 138 42.0
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 1.2e-19 102.1 134 43.3
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 3.5e-19 100.5 403 60.8
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 6.0e-19 99.8 137 58.4
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 5.0e-18 96.7 137 35.8
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 6.6e-18 96.3 137 37.2
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 3.3e-17 94.0 137 35.8
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 2.8e-16 90.9 137 36.5
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 6.2e-16 89.7 137 57.7
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 1.4e-15 88.6 146 34.9
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 6.8e-15 86.3 140 37.9
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 6.8e-15 86.3 140 37.9
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 8.9e-15 85.9 137 35.0
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 1.2e-14 85.5 138 52.9
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 1.5e-14 85.1 137 51.8
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 1.5e-14 85.1 80 58.8
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 1.5e-14 85.1 138 38.4
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 7.5e-14 82.8 338 76.3
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 1.3e-13 82.0 141 33.3
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 1.7e-13 81.6 140 32.9
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 1.7e-13 81.6 137 47.4
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.2e-13 81.3 138 37.0
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 3.7e-13 80.5 137 32.8
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 3.7e-13 80.5 132 37.1
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 3.7e-13 80.5 137 32.1
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 4.9e-13 80.1 137 32.8
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 6.4e-13 79.7 137 32.8
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 1.1e-12 79.0 142 43.0
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 1.1e-12 79.0 137 56.2
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 5.4e-12 76.6 137 39.4
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 9.2e-12 75.9 137 32.1
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 7.8e-11 72.8 140 30.0
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 3.0e-10 70.9 138 54.3
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 3.0e-10 70.9 70 52.9
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 3.9e-10 70.5 66 50.0
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 5.0e-10 70.1 139 51.1
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 5.0e-10 70.1 78 46.2
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 6.6e-10 69.7 141 40.4
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 8.6e-10 69.3 138 45.7
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 1.1e-09 68.9 70 42.9
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.1e-09 68.9 70 42.9
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 1.5e-09 68.6 72 43.1
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 2.5e-09 67.8 76 43.4
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 4.3e-09 67.0 71 43.7
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 5.6e-09 66.6 75 41.3
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 7.3e-09 66.2 69 47.8
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.2e-08 65.5 139 50.4
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 1.6e-08 65.1 85 45.9
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 1.6e-08 65.1 76 43.4
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 2.8e-08 64.3 77 42.9
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 3.6e-08 63.9 67 46.3
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 6.2e-08 63.2 70 40.0
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 1.4e-07 62.0 64 46.9
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 1.8e-07 61.6 73 41.1
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.1e-07 60.8 76 40.8
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 3.1e-07 60.8 66 47.0
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 8.9e-07 59.3 144 29.9
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 2.6e-06 57.8 71 39.4
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 5.8e-06 56.6 57 45.6
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 9.9e-06 55.8 78 37.2


User provided reference genes

Program Settings