Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 3.9e-142 508.1 249 100.0
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 1.5e-120 436.4 217 97.7
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 1.3e-100 370.2 236 82.6
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 1.6e-74 283.5 238 65.5
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 1.1e-67 260.8 229 66.8
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 3.2e-67 259.2 234 64.1
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 3.0e-65 252.7 234 62.8
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 1.2e-34 151.0 226 40.3
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 8.8e-33 144.8 188 45.7
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 5.7e-32 142.1 193 46.1
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 1.4e-30 137.5 252 36.1
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 3.8e-28 129.4 214 42.5
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 3.8e-28 129.4 200 43.0
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 1.1e-27 127.9 214 42.1
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 1.9e-27 127.1 214 38.8
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 3.2e-27 126.3 239 36.0
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 4.2e-27 125.9 194 40.7
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 1.6e-26 124.0 198 40.9
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 2.1e-26 123.6 234 37.2
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 2.1e-26 123.6 238 36.1
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 2.1e-26 123.6 187 41.7
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 2.1e-26 123.6 187 41.7
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 2.7e-26 123.2 185 40.5
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 3.9e-25 119.4 208 38.9
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 5.1e-25 119.0 190 41.1
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 6.7e-25 118.6 247 36.8
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 4.4e-24 115.9 205 40.0
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 7.4e-24 115.2 183 41.0
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 4.8e-23 112.5 194 39.7
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 6.3e-23 112.1 187 38.0
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 1.1e-22 111.3 196 38.3
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.4e-22 110.9 195 39.0
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 1.4e-22 110.9 212 35.8
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.1e-22 109.8 244 35.2
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 7.0e-22 108.6 205 36.1
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 1.5e-21 107.5 243 35.0
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.5e-21 107.5 196 38.8
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.0e-21 107.1 243 35.0
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 3.4e-21 106.3 190 38.4
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 4.5e-21 105.9 196 38.3
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 5.9e-21 105.5 193 40.4
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 5.9e-21 105.5 194 38.1
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 5.9e-21 105.5 194 38.1
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 7.7e-21 105.1 193 35.2
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 1.0e-20 104.8 193 37.8
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 2.2e-20 103.6 216 32.9
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 2.2e-20 103.6 187 39.0
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 2.9e-20 103.2 213 34.3
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 3.8e-20 102.8 193 34.7
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 5.0e-20 102.4 193 38.9
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.9e-19 100.5 197 37.6
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 2.5e-19 100.1 191 35.6
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 5.5e-19 99.0 221 35.7
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 5.5e-19 99.0 201 37.8
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 7.2e-19 98.6 206 36.4
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 9.4e-19 98.2 195 35.9
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 1.2e-18 97.8 248 30.2
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 1.6e-18 97.4 201 37.8
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 2.7e-18 96.7 196 35.2
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 2.7e-18 96.7 147 39.5
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 2.7e-18 96.7 197 34.5
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 6.1e-18 95.5 226 35.8
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 1.0e-17 94.7 201 35.3
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 1.4e-17 94.4 203 34.0
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 3.9e-17 92.8 161 35.4
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 3.9e-17 92.8 235 34.9
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 8.8e-17 91.7 195 34.9
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 2.0e-16 90.5 187 35.8
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 5.7e-16 89.0 181 35.9
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 9.7e-16 88.2 210 34.8
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 3.7e-15 86.3 158 37.3
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 6.3e-15 85.5 147 38.8
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 3.1e-14 83.2 154 36.4
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 1.2e-13 81.3 221 29.4
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 2.6e-13 80.1 151 37.7
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 5.9e-13 79.0 171 33.9
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 5.9e-13 79.0 192 34.4
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.0e-12 78.2 127 40.2
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 8.5e-12 75.1 190 34.2
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 2.5e-11 73.6 189 34.4
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 9.4e-11 71.6 139 33.8
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 9.4e-11 71.6 198 30.3
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 1.2e-10 71.2 205 29.8
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 2.1e-10 70.5 141 30.5
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 2.7e-10 70.1 235 27.2
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 4.7e-10 69.3 229 24.5
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 1.4e-09 67.8 160 31.2
COL.COLO4_12535 Corchorus olitorius HOM05D007287 ORTHO05D008965 3.0e-09 66.6 129 36.4
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 4.0e-09 66.2 138 32.6
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.5e-08 64.3 128 32.0
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 4.4e-08 62.8 251 30.3
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 9.7e-08 61.6 192 32.8
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.1e-06 58.2 127 34.6
Medtr4g079340 Medicago truncatula HOM05D007287 ORTHO05D008965 1.8e-06 57.4 64 42.2
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 2.4e-06 57.0 116 33.6
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 3.1e-06 56.6 230 25.2


User provided reference genes

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