Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g031577.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 9.1e-71 270.0 126 100.0
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-34 149.4 125 61.6
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 1.4e-31 139.8 125 58.4
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 6.0e-30 134.4 125 56.8
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 7.8e-30 134.0 126 57.9
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 7.8e-30 134.0 126 57.9
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 3.0e-29 132.1 125 56.0
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 6.2e-27 124.4 123 54.5
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.2e-27 124.4 123 54.5
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.2e-26 121.3 123 54.5
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 1.2e-25 120.2 105 58.1
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 2.0e-25 119.4 124 54.0
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.4e-25 118.6 123 52.0
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 9.9e-25 117.1 103 58.3
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.2e-24 115.9 121 51.2
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 8.4e-24 114.0 103 57.3
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 8.4e-24 114.0 103 57.3
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 8.4e-24 114.0 82 65.9
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 1.4e-23 113.2 102 56.9
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 4.2e-23 111.7 82 64.6
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 7.1e-23 110.9 103 55.3
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 1.2e-22 110.2 125 50.4
Nitab4.5_0001919g0100 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.6e-22 109.8 138 46.4
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 3.5e-22 108.6 82 63.4
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.6e-22 108.2 104 53.8
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 7.8e-22 107.5 125 48.8
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.0e-21 107.1 125 48.8
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.0e-21 107.1 125 48.8
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 1.7e-21 106.3 125 48.0
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 1.7e-21 106.3 90 61.1
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.1e-20 103.6 103 51.5
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 1.9e-20 102.8 125 48.8
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 2.5e-20 102.4 125 48.0
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 3.3e-20 102.1 105 54.3
Nitab4.5_0001152g0980 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.6e-20 100.5 99 52.5
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 8.1e-19 97.4 71 66.2
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 1.1e-18 97.1 102 52.0
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.1e-18 97.1 125 46.4
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.1e-18 97.1 125 46.4
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 2.4e-18 95.9 125 44.8
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 4.0e-18 95.1 73 63.0
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 6.9e-18 94.4 71 64.8
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 6.9e-18 94.4 71 64.8
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.9e-18 94.4 71 64.8
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 6.9e-18 94.4 71 64.8
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 6.9e-18 94.4 71 64.8
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 6.9e-18 94.4 71 64.8
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 6.9e-18 94.4 71 64.8
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 2.0e-17 92.8 71 63.4
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.0e-17 92.8 71 64.8
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 2.6e-17 92.4 71 64.8
CAN.G993.11 Capsicum annuum HOM05D000533 ORTHO05D001069 2.6e-17 92.4 95 51.6
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 2.6e-17 92.4 71 64.8
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 3.4e-17 92.0 126 45.2
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 3.4e-17 92.0 71 63.4
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 5.8e-17 91.3 71 63.4
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 5.8e-17 91.3 71 63.4
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 5.8e-17 91.3 71 63.4
CAN.G497.41 Capsicum annuum HOM05D000533 ORTHO05D001069 7.6e-17 90.9 84 53.6
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.6e-17 90.9 71 62.0
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 9.9e-17 90.5 71 63.4
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 9.9e-17 90.5 71 63.4
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.3e-16 90.1 72 61.1
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 2.2e-16 89.4 71 62.0
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 2.2e-16 89.4 71 62.0
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 2.2e-16 89.4 67 64.2
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 4.9e-16 88.2 71 62.0
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 6.4e-16 87.8 125 41.6
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 6.4e-16 87.8 119 45.4
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 6.4e-16 87.8 69 63.8
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 8.4e-16 87.4 71 62.0
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 8.4e-16 87.4 71 62.0
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 1.1e-15 87.0 71 62.0
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 2.4e-15 85.9 67 64.2
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.4e-15 85.9 120 44.2
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 3.2e-15 85.5 71 60.6
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 5.4e-15 84.7 83 51.8
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 4.6e-14 81.6 62 62.9
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.0e-14 81.3 109 46.8
Sed0003538 Sechium edule HOM05D000533 ORTHO05D001069 6.0e-14 81.3 83 56.6
arahy.Tifrunner.gnm1.ann1.ELH4X7 Arachis hypogaea HOM05D000533 ORTHO05D001069 1.3e-13 80.1 64 62.5
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 8.7e-13 77.4 125 36.8
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.3e-12 75.5 75 56.0
SHI42239 Sapria himalayana HOM05D000533 ORTHO05D001069 9.6e-12 73.9 56 64.3
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 2.8e-11 72.4 50 66.0
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.8e-11 72.4 73 53.4
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 6.2e-11 71.2 123 34.1
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 1.1e-10 70.5 71 47.9
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 1.4e-10 70.1 125 35.2
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 1.8e-10 69.7 125 36.0
SHI29300 Sapria himalayana HOM05D000533 ORTHO05D001069 1.8e-10 69.7 52 63.5
BraSC159t45735Z Brassica rapa HOM05D000533 ORTHO05D001069 2.4e-10 69.3 50 70.0
PGSC0003DMG400029135 Solanum tuberosum HOM05D000533 ORTHO05D001069 2.4e-10 69.3 44 75.0
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 3.1e-10 68.9 120 35.8
Solyc12g036590.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.9e-10 67.8 51 62.7
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 1.5e-09 66.6 50 64.0
Nitab4.5_0008578g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.8e-09 64.7 52 59.6
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 7.6e-09 64.3 58 51.7
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.6e-09 64.3 50 58.0
Aqoxy7G01636 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.7e-08 63.2 45 64.4
CBR_g30873 Chara braunii HOM05D004541 ORTHO05D000800 1.1e-07 60.5 94 40.4
Nitab4.5_0000734g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-07 60.5 41 70.7
Cpa.g.sc200.35 Carica papaya HOM05D000533 ORTHO05D001069 1.9e-07 59.7 73 46.6
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 7.1e-07 57.8 46 58.7
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 7.1e-07 57.8 57 57.9
Nitab4.5_0012067g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.1e-06 56.2 71 43.7


User provided reference genes

Program Settings