Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 3.3e-152 541.6 259 100.0
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.5e-144 516.2 253 98.0
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.6e-122 443.0 255 82.4
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 5.8e-120 434.5 253 81.4
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 3.3e-107 392.1 253 75.5
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 2.6e-104 382.5 222 82.4
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 2.2e-87 326.2 260 61.2
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 9.3e-86 320.9 249 63.9
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.1e-85 319.7 262 61.5
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.3e-84 317.0 260 61.2
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.9e-83 313.2 260 60.0
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 5.6e-83 311.6 259 59.1
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.3e-82 310.5 247 61.9
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 3.6e-82 308.9 259 59.1
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 9.0e-81 304.3 254 60.6
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 9.0e-81 304.3 247 59.9
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 9.0e-81 304.3 247 59.9
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.2e-80 303.9 256 56.2
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 5.8e-80 301.6 263 57.0
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 2.9e-79 299.3 261 57.9
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 8.4e-79 297.7 261 55.2
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 8.4e-79 297.7 247 59.1
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 1.9e-78 296.6 261 59.0
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.9e-78 296.6 247 58.7
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 5.4e-78 295.0 267 55.8
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 6.0e-77 291.6 254 56.7
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 2.3e-76 289.7 268 54.9
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 6.7e-76 288.1 247 57.5
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 2.5e-75 286.2 251 57.4
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 9.6e-75 284.3 252 55.6
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 1.1e-73 280.8 252 54.0
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 1.1e-73 280.8 254 53.9
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.8e-73 280.0 228 61.4
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.4e-73 279.6 138 94.9
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 2.0e-72 276.6 252 54.0
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 4.5e-72 275.4 259 58.7
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 7.6e-72 274.6 259 58.7
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 2.5e-70 269.6 233 56.2
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 3.2e-70 269.2 267 52.1
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 7.1e-70 268.1 263 52.5
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 1.2e-69 267.3 270 50.0
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 3.5e-69 265.8 249 53.4
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 1.0e-68 264.2 258 52.7
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 1.3e-68 263.8 374 41.7
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 3.0e-68 262.7 253 51.8
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 6.7e-68 261.5 264 51.1
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 1.9e-67 260.0 254 51.2
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 7.4e-67 258.1 251 52.6
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 2.1e-66 256.5 245 54.7
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 4.8e-66 255.4 318 45.9
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 8.2e-66 254.6 255 51.0
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.3e-63 247.3 246 52.4
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 2.2e-63 246.5 248 51.6
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 4.9e-63 245.4 247 51.8
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 6.5e-63 245.0 210 58.1
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 6.5e-63 245.0 255 50.2
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.9e-62 243.4 247 51.4
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 4.2e-62 242.3 270 49.6
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 7.1e-62 241.5 262 47.3
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 1.6e-61 240.4 245 52.2
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 2.7e-61 239.6 248 51.6
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 3.5e-61 239.2 246 50.4
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 7.9e-61 238.0 251 49.0
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 1.3e-60 237.3 269 48.7
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 2.3e-60 236.5 254 47.2
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 6.7e-60 235.0 247 49.0
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 6.7e-60 235.0 247 49.0
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 6.7e-60 235.0 247 49.0
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 8.7e-60 234.6 249 47.8
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 8.7e-60 234.6 262 47.3
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 1.5e-59 233.8 245 50.2
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 2.5e-59 233.0 246 50.0
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 4.3e-59 232.3 248 50.0
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.1e-57 227.6 233 46.8
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.8e-57 226.9 197 59.9
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 9.0e-57 224.6 209 53.6
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.2e-56 224.2 201 56.2
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 4.5e-56 222.2 276 43.1
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 3.8e-55 219.2 326 42.9
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 1.9e-54 216.9 163 62.6
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 4.2e-54 215.7 232 47.8
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 1.2e-53 214.2 177 61.0
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 9.7e-51 204.5 235 45.5
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 1.7e-50 203.8 238 48.3
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 6.9e-49 198.4 243 46.9
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 2.6e-48 196.4 211 49.8
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 1.7e-47 193.7 259 45.2
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 9.4e-46 188.0 256 43.4
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.2e-45 187.6 259 43.2
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 1.1e-43 181.0 275 38.9
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 2.2e-39 166.8 234 38.9
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.2e-32 144.4 85 85.9
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 2.6e-32 143.3 153 51.0
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 4.7e-29 132.5 245 36.3
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 2.2e-26 123.6 243 33.7
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 1.7e-23 114.0 141 46.8
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 5.5e-22 109.0 174 38.5
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 6.1e-21 105.5 199 30.7
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.2e-19 101.3 218 33.5
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 4.4e-19 99.4 167 35.3
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 5.7e-19 99.0 264 30.7
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 1.8e-17 94.0 133 40.6
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 2.9e-15 86.7 240 30.0
TPR.G6328 Trifolium pratense HOM05D000001 ORTHO05D009753 1.1e-06 58.2 37 70.3


User provided reference genes

Program Settings