Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.2e-98 363.2 186 100.0
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 9.6e-93 343.6 190 93.7
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 1.9e-77 292.7 194 81.4
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 2.8e-68 262.3 206 70.4
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 2.2e-65 252.7 222 66.7
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 9.4e-64 247.3 217 68.2
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 2.9e-57 225.7 194 66.0
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.4e-56 223.4 192 63.0
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 2.7e-55 219.2 197 64.5
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 2.7e-55 219.2 198 64.6
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 6.1e-55 218.0 207 61.8
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 6.1e-55 218.0 199 63.8
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 7.9e-55 217.6 212 63.7
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 1.8e-54 216.5 198 62.6
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.5e-53 213.4 194 61.3
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.7e-53 211.5 207 61.4
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.7e-52 209.9 152 73.0
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 2.2e-52 209.5 203 59.6
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 2.2e-52 209.5 201 60.7
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 6.3e-52 208.0 184 64.1
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 6.3e-52 208.0 185 61.6
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 8.2e-52 207.6 185 64.3
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.4e-51 206.8 171 64.9
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 2.4e-51 206.1 155 70.3
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.1e-51 205.7 191 62.8
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.1e-51 205.7 184 63.6
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 4.1e-51 205.3 209 59.8
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 4.1e-51 205.3 178 62.9
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 7.0e-51 204.5 208 58.7
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 7.0e-51 204.5 197 59.9
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 9.1e-51 204.1 197 58.9
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 1.0e-49 200.7 199 62.3
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 1.0e-49 200.7 226 55.3
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 2.2e-49 199.5 203 57.6
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.2e-49 199.5 198 62.6
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.0e-49 198.4 214 57.0
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 5.0e-49 198.4 214 57.0
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 6.5e-49 198.0 182 62.1
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.4e-48 196.8 206 58.3
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 1.9e-48 196.4 172 59.9
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.5e-48 196.1 190 60.5
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.2e-48 195.3 187 62.0
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 4.2e-48 195.3 201 57.2
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 7.2e-48 194.5 159 64.2
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 9.4e-48 194.1 172 58.7
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 1.2e-47 193.7 157 67.5
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 1.6e-47 193.4 186 59.7
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 2.1e-47 193.0 219 54.8
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 2.7e-47 192.6 196 56.6
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 6.1e-47 191.4 176 61.4
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 6.1e-47 191.4 191 55.5
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 2.3e-46 189.5 190 58.4
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 2.3e-46 189.5 153 67.3
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 3.9e-46 188.7 225 53.8
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 8.8e-46 187.6 152 65.8
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 8.8e-46 187.6 151 68.2
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.1e-45 187.2 167 62.3
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 1.1e-45 187.2 117 79.5
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.1e-45 187.2 210 55.7
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 1.5e-45 186.8 153 65.4
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 3.3e-45 185.7 170 58.8
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 3.3e-45 185.7 140 67.9
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 4.4e-45 185.3 153 66.0
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 5.7e-45 184.9 200 57.0
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 9.7e-45 184.1 192 54.2
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 1.3e-44 183.7 159 64.2
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.2e-44 183.0 187 57.8
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 2.2e-44 183.0 194 55.2
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 2.8e-44 182.6 182 59.9
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.7e-44 182.2 145 67.6
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 6.3e-44 181.4 153 63.4
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 6.3e-44 181.4 155 65.8
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 8.2e-44 181.0 199 55.8
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.1e-43 180.6 154 63.0
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.4e-43 180.3 151 64.9
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.4e-43 180.3 151 64.9
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.8e-43 179.9 183 55.2
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 1.8e-43 179.9 193 56.5
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 1.8e-43 179.9 193 56.5
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.8e-43 179.9 218 51.8
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.8e-43 179.9 190 57.4
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 2.4e-43 179.5 200 55.0
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 4.1e-43 178.7 186 57.0
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 5.3e-43 178.3 151 64.2
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 5.3e-43 178.3 200 54.0
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.2e-42 177.2 177 57.1
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.6e-42 176.8 107 79.4
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.6e-42 176.0 189 56.1
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 3.5e-42 175.6 195 56.4
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 3.5e-42 175.6 188 55.3
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.0e-41 174.1 185 55.7
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 6.5e-41 171.4 158 62.0
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.5e-40 170.2 118 73.7
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 5.5e-40 168.3 179 54.7
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.2e-39 167.2 154 58.4
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 1.6e-39 166.8 108 76.9
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 3.6e-39 165.6 155 61.9
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 6.1e-39 164.9 112 72.3
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.2e-37 160.6 198 50.0
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 2.0e-37 159.8 141 58.2
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 4.4e-37 158.7 106 76.4
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 2.8e-36 156.0 92 80.4
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 1.8e-35 153.3 106 67.0
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 2.4e-35 152.9 155 51.6
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.0e-33 145.2 158 55.7
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.5e-32 143.7 129 63.6
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 7.5e-29 131.3 143 52.4
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 1.0e-25 120.9 112 50.0
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 8.6e-25 117.9 114 53.5
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 2.8e-23 112.8 101 51.5
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 2.6e-21 106.3 151 46.4
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 3.4e-21 105.9 110 49.1
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.5e-16 90.5 119 46.2
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 2.3e-14 83.2 72 56.9
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 2.8e-07 59.7 134 38.8
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.2e-06 55.5 143 35.0


User provided reference genes

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