Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g018260.2 Solanum lycopersicum HOM05D000069 ORTHO05D001405 4.6e-58 227.6 111 100.0
Solyc11g008260.2 Solanum lycopersicum HOM05D000069 ORTHO05D001405 4.7e-55 217.6 110 94.5
PGSC0003DMG400031066 Solanum tuberosum HOM05D000069 ORTHO05D001405 6.8e-54 213.8 110 94.5
Sopen11g004070 Solanum pennellii HOM05D000069 ORTHO05D001405 4.4e-53 211.1 110 93.6
CAN.G321.51 Capsicum annuum HOM05D000069 ORTHO05D001405 4.0e-38 161.4 115 70.4
Peaxi162Scf00145g00109 Petunia axillaris HOM05D000069 ORTHO05D001405 1.3e-36 156.4 111 73.9
Nitab4.5_0008227g0020 Nicotiana tabacum HOM05D000069 ORTHO05D001405 7.9e-34 147.1 115 72.2
Nitab4.5_0001450g0200 Nicotiana tabacum HOM05D000069 ORTHO05D001405 4.6e-26 121.3 80 77.5
Dinv36386 Davidia involucrata HOM05D000069 ORTHO05D001405 6.9e-22 107.5 107 54.2
Lsat_1_v5_gn_8_18720 Lactuca sativa HOM05D000069 ORTHO05D001405 1.5e-21 106.3 107 57.0
Oeu010014.1 Olea europaea HOM05D000069 ORTHO05D001405 3.4e-21 105.1 108 54.6
SalBow4G1595 Salvia bowleyana HOM05D000069 ORTHO05D001405 7.6e-21 104.0 112 57.1
SalBow4G2585 Salvia bowleyana HOM05D000069 ORTHO05D001405 7.6e-21 104.0 112 57.1
Cc02_g10820 Coffea canephora HOM05D000069 ORTHO05D001405 8.4e-20 100.5 113 48.7
Ciclev10031865m.g Citrus clementina HOM05D000069 ORTHO05D001405 6.0e-18 94.4 97 52.6
vmacro10248 Vaccinium macrocarpon HOM05D000069 ORTHO05D001405 1.8e-17 92.8 111 49.5
DCAR_019063 Daucus carota HOM05D000069 ORTHO05D001405 2.3e-17 92.4 104 51.9
Hma1.2p1_0145F.1_g065280 Hydrangea macrophylla HOM05D000069 ORTHO05D001405 3.0e-17 92.0 52 75.0
Actinidia38874 Actinidia chinensis HOM05D000069 ORTHO05D001405 5.1e-17 91.3 104 50.0
Atru.chr12.870 Acer truncatum HOM05D000069 ORTHO05D001405 6.7e-17 90.9 104 50.0
Lj3A938T43 Lonicera japonica HOM05D000069 ORTHO05D001405 8.7e-17 90.5 104 50.0
Rhsim09G0147100 Rhododendron simsii HOM05D000069 ORTHO05D001405 8.7e-17 90.5 111 47.7
SGA_v2.0_scaffold68G22827 Striga asiatica HOM05D000069 ORTHO05D001405 2.5e-16 89.0 112 46.4
Nn2g13829 Nelumbo nucifera HOM05D000069 ORTHO05D001405 4.3e-16 88.2 106 49.1
A09p47930 Brassica napus HOM05D000069 ORTHO05D001405 5.7e-16 87.8 96 50.0
C08p30170 Brassica napus HOM05D000069 ORTHO05D001405 5.7e-16 87.8 99 48.5
BolC8t50623H Brassica oleracea HOM05D000069 ORTHO05D001405 5.7e-16 87.8 99 48.5
BraA09t40248Z Brassica rapa HOM05D000069 ORTHO05D001405 5.7e-16 87.8 96 50.0
Sp5g07480 Schrenkiella parvula HOM05D000069 ORTHO05D001405 1.3e-15 86.7 103 47.6
Migut.F01949 Erythranthe guttata HOM05D000069 ORTHO05D001405 1.6e-15 86.3 112 44.6
MD07G1169100 Malus domestica HOM05D000069 ORTHO05D001405 1.6e-15 86.3 107 48.6
ECA233G1755 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.2e-15 85.9 53 71.7
Thhalv10010475m.g Eutrema salsugineum HOM05D000069 ORTHO05D001405 2.8e-15 85.5 79 55.7
PSO063G2424 Papaver somniferum HOM05D000069 ORTHO05D001405 2.8e-15 85.5 96 50.0
PSO339G6403 Papaver somniferum HOM05D000069 ORTHO05D001405 2.8e-15 85.5 96 50.0
THA.LOC104809980 Tarenaya hassleriana HOM05D000069 ORTHO05D001405 2.8e-15 85.5 82 52.4
Haze_16747 Corylus avellana HOM05D000069 ORTHO05D001405 8.2e-15 84.0 111 45.9
Potri.010G228400 Populus trichocarpa HOM05D000069 ORTHO05D001405 8.2e-15 84.0 112 47.3
TWI38G0041 Tripterygium wilfordii HOM05D000069 ORTHO05D001405 1.1e-14 83.6 104 48.1
CANSAT56G3389 Cannabis sativa HOM05D000069 ORTHO05D001405 1.4e-14 83.2 117 47.0
vmacro04831 Vaccinium macrocarpon HOM05D000069 ORTHO05D001405 1.4e-14 83.2 83 53.0
Carub.0005s2155 Capsella rubella HOM05D000069 ORTHO05D001405 1.8e-14 82.8 100 47.0
Aa31sc43G30 Aethionema arabicum HOM05D000069 ORTHO05D001405 3.1e-14 82.0 91 48.4
MELO3C012403.2 Cucumis melo HOM05D000069 ORTHO05D001405 5.3e-14 81.3 109 46.8
CiPaw.01G267800 Carya illinoinensis HOM05D000069 ORTHO05D001405 9.0e-14 80.5 108 44.4
AL5G36050 Arabidopsis lyrata HOM05D000069 ORTHO05D001405 1.2e-13 80.1 99 46.5
CARHR164920 Cardamine hirsuta HOM05D000069 ORTHO05D001405 1.5e-13 79.7 80 50.0
AT3G54940 Arabidopsis thaliana HOM05D000069 ORTHO05D001405 2.0e-13 79.3 100 47.0
Cfa001803 Carpinus fangiana HOM05D000069 ORTHO05D001405 2.0e-13 79.3 107 45.8
ClCG05G021240 Citrullus lanatus HOM05D000069 ORTHO05D001405 2.0e-13 79.3 98 45.9
Sabra10G0177100 Salix brachista HOM05D000069 ORTHO05D001405 2.6e-13 79.0 76 53.9
Prupe.2G207100 Prunus persica HOM05D000069 ORTHO05D001405 3.4e-13 78.6 99 48.5
TAR633G1788 Trochodendron aralioides HOM05D000069 ORTHO05D001405 4.5e-13 78.2 105 45.7
Aqoxy1G01131 Aquilegia oxysepala HOM05D000069 ORTHO05D001405 1.3e-12 76.6 109 42.2
Gohir.A10G201800 Gossypium hirsutum HOM05D000069 ORTHO05D001405 1.3e-12 76.6 111 44.1
Thecc.10G086000 Theobroma cacao HOM05D000069 ORTHO05D001405 1.3e-12 76.6 77 50.6
FAN06G2379 Fragaria x ananassa HOM05D000069 ORTHO05D001405 2.2e-12 75.9 104 45.2
RcHm_v2.0_Chr1g0362341 Rosa chinensis HOM05D000069 ORTHO05D001405 2.2e-12 75.9 98 48.0
FAN06G4518 Fragaria x ananassa HOM05D000069 ORTHO05D001405 2.9e-12 75.5 105 46.7
Manes.10G050900 Manihot esculenta HOM05D000069 ORTHO05D001405 2.9e-12 75.5 99 44.4
Sed0002419 Sechium edule HOM05D000069 ORTHO05D001405 2.9e-12 75.5 104 43.3
Gorai.011G235500 Gossypium raimondii HOM05D000069 ORTHO05D001405 5.0e-12 74.7 110 44.5
Hund26354 Selenicereus undatus HOM05D000185 ORTHO05D000105 8.5e-12 73.9 53 67.9
FvH4_7g18550 Fragaria vesca HOM05D000069 ORTHO05D001405 1.4e-11 73.2 104 44.2
FAN03G0998 Fragaria x ananassa HOM05D000069 ORTHO05D001405 1.4e-11 73.2 105 44.8
QL08p053902 Quercus lobata HOM05D000069 ORTHO05D001405 1.4e-11 73.2 110 40.9
FvH4_7g18581 Fragaria vesca HOM05D000069 ORTHO05D001405 2.5e-11 72.4 105 44.8
TPR.G10296 Trifolium pratense HOM05D000069 ORTHO05D001405 2.5e-11 72.4 45 71.1
Gohir.D10G210100 Gossypium hirsutum HOM05D000069 ORTHO05D001405 4.2e-11 71.6 110 43.6
Lalb_Chr21g0315191 Lupinus albus HOM05D000069 ORTHO05D001405 4.2e-11 71.6 79 46.8
CsaV3_5G036030 Cucumis sativus L. HOM05D000069 ORTHO05D001405 9.4e-11 70.5 71 49.3
EL10Ac8g18277 Beta vulgaris HOM05D000069 ORTHO05D001405 1.2e-10 70.1 78 46.2
Lj5g0020661 Lotus japonicus HOM05D000069 ORTHO05D001405 1.2e-10 70.1 45 64.4
Cpa.g.sc53.142 Carica papaya HOM05D000069 ORTHO05D001405 1.6e-10 69.7 53 58.5
Medtr1g094135 Medicago truncatula HOM05D000069 ORTHO05D001405 1.6e-10 69.7 45 66.7
Ca_10535_v3 Cicer arietinum L. HOM05D000069 ORTHO05D001405 4.6e-10 68.2 45 62.2
Glyma.20G183732 Glycine max HOM05D000069 ORTHO05D001405 4.6e-10 68.2 45 64.4
Psat6g180640 Pisum sativum HOM05D000069 ORTHO05D001405 4.6e-10 68.2 45 62.2
Glyma.10G207100 Glycine max HOM05D000069 ORTHO05D001405 6.1e-10 67.8 108 36.1
Ah.09g229810 Amaranthus hybridus HOM05D000069 ORTHO05D001405 7.9e-10 67.4 73 46.6
COL.COLO4_36541 Corchorus olitorius HOM05D000069 ORTHO05D001405 1.0e-09 67.0 41 68.3
Pp3c3_17920 Physcomitrium patens HOM05D000069 ORTHO05D001405 1.4e-09 66.6 89 46.1
HPP92_005029 Vanilla planifolia HOM05D000069 ORTHO05D001405 1.4e-09 66.6 54 53.7
Eucgr.J01054 Eucalyptus grandis HOM05D000069 ORTHO05D001405 2.3e-09 65.9 45 66.7
Pp3c13_8810 Physcomitrium patens HOM05D000069 ORTHO05D001405 8.8e-09 63.9 80 45.0
PGR044G0244 Punica granatum HOM05D000069 ORTHO05D001405 1.9e-08 62.8 44 56.8
VMungo0720G2150 Vigna mungo HOM05D000069 ORTHO05D001405 3.3e-08 62.0 45 60.0
arahy.Tifrunner.gnm1.ann1.L0YPF1 Arachis hypogaea HOM05D000069 ORTHO05D001405 4.3e-08 61.6 45 53.3
arahy.Tifrunner.gnm1.ann1.TVM56H Arachis hypogaea HOM05D000069 ORTHO05D001405 4.3e-08 61.6 45 53.3
Phvul.007G099600 Phaseolus vulgaris HOM05D000069 ORTHO05D001405 4.3e-08 61.6 45 60.0
Atru.chr5.3103 Acer truncatum HOM05D000069 ORTHO05D001405 9.7e-08 60.5 91 42.9
CDE02G0794 Ceratophyllum demersum HOM05D000069 ORTHO05D001405 2.8e-07 58.9 44 54.5
Psat0s3831g0160 Pisum sativum HOM05D000069 ORTHO05D001405 2.8e-07 58.9 91 39.6
AUR62033210 Chenopodium quinoa HOM05D000069 ORTHO05D001405 3.7e-07 58.5 37 67.6
MD10G1066900 Malus domestica HOM05D000069 ORTHO05D001405 3.7e-07 58.5 95 41.1
Sed0026804 Sechium edule HOM05D000069 ORTHO05D001405 3.7e-07 58.5 100 40.0
ClCG11G004070 Citrullus lanatus HOM05D000069 ORTHO05D001405 4.8e-07 58.2 74 43.2
AUR62040312 Chenopodium quinoa HOM05D000069 ORTHO05D001405 6.3e-07 57.8 37 67.6
RcHm_v2.0_Chr3g0466551 Rosa chinensis HOM05D000069 ORTHO05D001405 8.2e-07 57.4 36 63.9
MELO3C023338.2 Cucumis melo HOM05D000069 ORTHO05D001405 1.1e-06 57.0 74 43.2
ATR0605G254 Amborella trichopoda HOM05D000069 ORTHO05D001405 1.4e-06 56.6 43 58.1
Aqoxy5G01516 Aquilegia oxysepala HOM05D000069 ORTHO05D001405 1.4e-06 56.6 101 35.6
SEGI_12324 Sequoiadendron giganteum HOM05D000069 ORTHO05D001405 1.8e-06 56.2 71 46.5
Glyma.06G027700 Glycine max HOM05D000069 ORTHO05D001405 2.4e-06 55.8 53 49.1
Manes.11G087200 Manihot esculenta HOM05D000069 ORTHO05D001405 2.4e-06 55.8 82 39.0
VMungo1309G0427 Vigna mungo HOM05D000069 ORTHO05D001405 2.4e-06 55.8 98 38.8
CsaV3_2G015130 Cucumis sativus L. HOM05D000069 ORTHO05D001405 4.1e-06 55.1 74 41.9
Glyma.04G027600 Glycine max HOM05D000069 ORTHO05D001405 4.1e-06 55.1 53 49.1
Os07g0480900 Oryza sativa ssp. japonica HOM05D000069 ORTHO05D001405 4.1e-06 55.1 71 45.1
Prupe.8G088700 Prunus persica HOM05D000069 ORTHO05D001405 4.1e-06 55.1 98 40.8
arahy.Tifrunner.gnm1.ann1.R5CNPB Arachis hypogaea HOM05D000069 ORTHO05D001405 5.3e-06 54.7 53 49.1
Manes.04G085600 Manihot esculenta HOM05D000069 ORTHO05D001405 5.3e-06 54.7 75 42.7
arahy.Tifrunner.gnm1.ann1.UX4ERZ Arachis hypogaea HOM05D000069 ORTHO05D001405 9.1e-06 53.9 53 47.2
CiPaw.05G071100 Carya illinoinensis HOM05D000069 ORTHO05D001405 9.1e-06 53.9 74 39.2
Medtr1g023210 Medicago truncatula HOM05D000069 ORTHO05D001405 9.1e-06 53.9 75 38.7
SMO367G0704 Selaginella moellendorffii HOM05D000069 ORTHO05D001405 9.1e-06 53.9 44 56.8


User provided reference genes

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