Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 3.9e-131 471.5 237 100.0
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 2.4e-128 462.2 235 98.7
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 8.7e-123 443.7 235 95.7
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 4.2e-101 371.7 235 83.0
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 5.7e-98 361.3 235 79.1
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 7.4e-98 360.9 235 79.1
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 1.1e-82 310.5 237 66.7
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 1.4e-72 276.9 234 63.7
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 1.0e-70 270.8 238 61.8
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 5.7e-66 255.0 237 59.9
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 8.5e-62 241.1 235 59.6
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 1.1e-61 240.7 235 57.9
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.8e-56 223.4 239 51.5
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 1.3e-54 217.2 249 50.2
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 2.8e-52 209.5 248 47.6
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 1.0e-51 207.6 238 48.7
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 1.8e-51 206.8 248 46.4
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 2.6e-50 203.0 256 47.3
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 1.7e-49 200.3 222 53.2
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 6.3e-49 198.4 242 48.8
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 1.8e-48 196.8 251 45.4
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.8e-48 196.8 250 47.6
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 3.2e-48 196.1 244 47.5
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 4.1e-48 195.7 225 55.6
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 1.2e-47 194.1 230 49.6
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 5.9e-47 191.8 240 45.0
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 5.9e-47 191.8 229 51.5
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 1.0e-46 191.0 235 46.0
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 1.3e-46 190.7 242 45.0
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 8.6e-46 188.0 245 45.7
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 2.5e-45 186.4 241 43.6
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 3.3e-45 186.0 263 44.5
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 3.3e-45 186.0 235 48.5
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 3.3e-45 186.0 249 43.4
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 4.3e-45 185.7 249 43.0
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.6e-44 183.7 241 44.8
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.1e-44 183.3 249 42.6
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 6.1e-44 181.8 232 45.7
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 1.0e-43 181.0 227 47.6
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 1.4e-43 180.6 250 42.4
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 1.8e-43 180.3 227 45.8
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 2.3e-43 179.9 243 44.9
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 4.0e-43 179.1 251 43.4
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 6.8e-43 178.3 241 42.7
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 6.8e-43 178.3 239 44.4
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 8.9e-43 177.9 243 43.2
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 1.2e-42 177.6 245 44.5
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 1.5e-42 177.2 239 43.1
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 2.0e-42 176.8 239 44.4
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 3.4e-42 176.0 250 42.4
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 1.3e-41 174.1 244 42.2
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.7e-41 172.6 245 42.4
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 4.9e-41 172.2 242 40.9
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 6.4e-41 171.8 245 42.4
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 1.4e-40 170.6 247 42.9
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 1.4e-40 170.6 226 44.2
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.2e-40 169.5 245 42.4
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 3.2e-40 169.5 239 41.4
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 9.2e-40 167.9 238 44.1
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 2.0e-39 166.8 251 41.8
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 2.7e-39 166.4 260 43.5
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.7e-39 166.4 233 44.6
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 4.6e-39 165.6 250 44.0
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 7.8e-39 164.9 228 43.4
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 7.8e-39 164.9 249 43.8
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 1.0e-38 164.5 244 41.8
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 1.0e-38 164.5 245 41.6
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 1.0e-38 164.5 242 42.1
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 3.0e-38 162.9 225 44.0
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.0e-38 162.9 247 41.3
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.1e-37 161.0 248 40.7
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 1.5e-37 160.6 236 41.5
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.5e-37 160.6 236 41.5
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 1.9e-37 160.2 243 41.6
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 3.3e-37 159.5 233 41.2
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 9.5e-37 157.9 265 39.6
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.2e-36 157.5 229 41.5
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 1.2e-36 157.5 247 42.9
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 1.6e-36 157.1 242 40.9
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 2.1e-36 156.8 229 41.0
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 2.8e-36 156.4 246 40.7
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 2.8e-36 156.4 246 40.2
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 4.7e-36 155.6 255 40.8
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 6.2e-36 155.2 250 41.2
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 2.3e-35 153.3 244 40.2
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 5.2e-35 152.1 244 39.3
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 5.2e-35 152.1 239 38.9
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 5.8e-34 148.7 255 40.8
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 1.3e-33 147.5 244 38.1
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 3.7e-33 146.0 238 42.4
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 1.9e-32 143.7 255 39.2
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 2.1e-31 140.2 242 38.8
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 2.7e-31 139.8 230 43.9
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 2.7e-31 139.8 250 39.6
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 1.5e-29 134.0 237 40.9
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 2.8e-28 129.8 110 56.4
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 5.2e-27 125.6 209 42.1
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 1.2e-26 124.4 121 51.2
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 1.2e-26 124.4 220 34.5
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 5.8e-26 122.1 218 38.1
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 2.2e-25 120.2 262 39.3
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 7.1e-24 115.2 125 48.8
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 9.2e-24 114.8 238 36.1
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 4.3e-21 105.9 246 32.9
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 6.2e-20 102.1 122 50.0
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 1.8e-19 100.5 292 29.1
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 5.2e-19 99.0 163 39.3
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 5.4e-16 89.0 117 40.2
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 9.3e-16 88.2 229 31.9
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 1.2e-15 87.8 237 32.1
Cc08_g04640 Coffea canephora HOM05D006207 ORTHO05D007868 3.9e-14 82.8 82 59.8
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 2.4e-11 73.6 211 30.8
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 1.7e-09 67.4 289 24.6
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 1.4e-08 64.3 192 28.6
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 2.1e-07 60.5 198 30.3
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 1.7e-06 57.4 58 46.6


User provided reference genes

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