Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g015110.2 Solanum lycopersicum HOM05D012579 ORTHO05D015026 4.1e-114 414.8 224 100.0
Sopen09g008530 Solanum pennellii HOM05D012579 ORTHO05D015026 5.0e-96 354.8 204 95.1
PGSC0003DMG400011617 Solanum tuberosum HOM05D012579 ORTHO05D015026 1.5e-79 300.1 184 82.6
PGSC0003DMG400011616 Solanum tuberosum HOM05D012579 ORTHO05D015026 1.3e-38 164.1 92 88.0
CAN.G1186.6 Capsicum annuum HOM05D012579 ORTHO05D015026 1.3e-27 127.5 183 40.4
CAN.G1186.4 Capsicum annuum HOM05D012579 ORTHO05D015026 7.1e-26 121.7 188 42.6
Nitab4.5_0000143g0600 Nicotiana tabacum HOM05D012579 ORTHO05D015026 2.7e-25 119.8 161 46.6
CAN.G1678.2 Capsicum annuum HOM05D012579 ORTHO05D015026 7.4e-15 85.1 108 44.4
Potri.004G074800 Populus trichocarpa HOM05D000226 ORTHO05D000142 1.6e-09 67.4 141 33.3
PGR004G0962 Punica granatum HOM05D000226 ORTHO05D000142 4.6e-09 65.9 133 33.1
PSO063G4911 Papaver somniferum HOM05D000226 ORTHO05D000142 1.4e-08 64.3 129 33.3
PSO782G0363 Papaver somniferum HOM05D000226 ORTHO05D000142 1.4e-08 64.3 129 33.3
Migut.K01092 Erythranthe guttata HOM05D000226 ORTHO05D000142 2.3e-08 63.5 122 32.8
Prupe.3G015300 Prunus persica HOM05D000226 ORTHO05D000142 2.3e-08 63.5 170 28.2
Atru.chr1.2086 Acer truncatum HOM05D000226 ORTHO05D000142 3.9e-08 62.8 133 33.1
SalBow5G2976 Salvia bowleyana HOM05D000226 ORTHO05D000142 6.7e-08 62.0 133 31.6
SalBow5G4415 Salvia bowleyana HOM05D000226 ORTHO05D000142 6.7e-08 62.0 133 31.6
CAN.G1186.5 Capsicum annuum HOM05D012579 ORTHO05D015026 8.8e-08 61.6 103 33.0
Migut.K01087 Erythranthe guttata HOM05D000226 ORTHO05D000142 8.8e-08 61.6 123 32.5
Cc11_g03680 Coffea canephora HOM05D000226 ORTHO05D000142 1.1e-07 61.2 139 27.3
SGA_v2.0_scaffold2G00961 Striga asiatica HOM05D000226 ORTHO05D000142 1.5e-07 60.8 149 28.9
Dinv19075 Davidia involucrata HOM05D000226 ORTHO05D000142 2.0e-07 60.5 140 29.3
Migut.K01088 Erythranthe guttata HOM05D000226 ORTHO05D000142 2.6e-07 60.1 122 32.0
Migut.K00738 Erythranthe guttata HOM05D000226 ORTHO05D000142 5.7e-07 58.9 122 31.1
Migut.K00739 Erythranthe guttata HOM05D000226 ORTHO05D000142 5.7e-07 58.9 122 31.1
Cc11_g03780 Coffea canephora HOM05D000226 ORTHO05D000142 7.4e-07 58.5 114 28.1
Rhsim10G0184000 Rhododendron simsii HOM05D000226 ORTHO05D000142 7.4e-07 58.5 143 30.1
Cpa.g.sc178.20 Carica papaya HOM05D000226 ORTHO05D000142 9.7e-07 58.2 142 30.3
Cc00_g01120 Coffea canephora HOM05D000226 ORTHO05D000142 9.7e-07 58.2 118 33.9
Cc11_g03750 Coffea canephora HOM05D000226 ORTHO05D000142 9.7e-07 58.2 118 33.9
Migut.K01079 Erythranthe guttata HOM05D000226 ORTHO05D000142 9.7e-07 58.2 122 31.1
Hund06876 Selenicereus undatus HOM05D000226 ORTHO05D000142 9.7e-07 58.2 162 26.5
Gohir.D03G175700 Gossypium hirsutum HOM05D000226 ORTHO05D000142 1.3e-06 57.8 148 27.7
Gorai.003G184900 Gossypium raimondii HOM05D000226 ORTHO05D000142 1.3e-06 57.8 148 27.7
QL02p064766 Quercus lobata HOM05D000226 ORTHO05D000142 1.3e-06 57.8 135 29.6
SGA_v2.0_scaffold115G32052 Striga asiatica HOM05D000226 ORTHO05D000142 1.7e-06 57.4 121 33.1
Duzib068G1266 Durio zibethinus HOM05D000226 ORTHO05D000142 2.2e-06 57.0 130 29.2
Gohir.A03G000036 Gossypium hirsutum HOM05D000226 ORTHO05D000142 2.2e-06 57.0 148 27.7
Gohir.D03G175800 Gossypium hirsutum HOM05D000226 ORTHO05D000142 2.2e-06 57.0 148 27.7
Cc11_g03760 Coffea canephora HOM05D000226 ORTHO05D000142 2.8e-06 56.6 118 34.7
Migut.H02245 Erythranthe guttata HOM05D000226 ORTHO05D000142 2.8e-06 56.6 135 31.1
Phvul.006G126600 Phaseolus vulgaris HOM05D000226 ORTHO05D000142 2.8e-06 56.6 135 28.9
SGA_v2.0_scaffold2G00939 Striga asiatica HOM05D000226 ORTHO05D000142 2.8e-06 56.6 128 30.5
Ciclev10006467m.g Citrus clementina HOM05D000226 ORTHO05D000142 3.7e-06 56.2 141 28.4
Gohir.A03G000037 Gossypium hirsutum HOM05D000226 ORTHO05D000142 3.7e-06 56.2 148 27.7
Gorai.003G185000 Gossypium raimondii HOM05D000226 ORTHO05D000142 3.7e-06 56.2 148 27.7
TWI77G0228 Tripterygium wilfordii HOM05D000226 ORTHO05D000142 3.7e-06 56.2 146 28.1
CANSAT21G0970 Cannabis sativa HOM05D000226 ORTHO05D000142 4.8e-06 55.8 97 33.0
CANSAT21G2153 Cannabis sativa HOM05D000226 ORTHO05D000142 4.8e-06 55.8 97 33.0
MELO3C020321.2 Cucumis melo HOM05D000226 ORTHO05D000142 4.8e-06 55.8 158 27.2
CsaV3_3G017810 Cucumis sativus L. HOM05D000226 ORTHO05D000142 4.8e-06 55.8 159 27.0
Thecc.04G064800 Theobroma cacao HOM05D000226 ORTHO05D000142 4.8e-06 55.8 119 33.6
TWI63G1340 Tripterygium wilfordii HOM05D000226 ORTHO05D000142 4.8e-06 55.8 103 32.0
Lalb_Chr16g0386831 Lupinus albus HOM05D000226 ORTHO05D000142 6.3e-06 55.5 140 29.3
COL.COLO4_06945 Corchorus olitorius HOM05D000226 ORTHO05D000142 8.2e-06 55.1 104 34.6
Migut.E00753 Erythranthe guttata HOM05D000226 ORTHO05D000142 8.2e-06 55.1 114 28.9
Gorai.011G016200 Gossypium raimondii HOM05D000226 ORTHO05D000142 8.2e-06 55.1 182 26.9
MD09G1277500 Malus domestica HOM05D000226 ORTHO05D000142 8.2e-06 55.1 160 29.4
TAR374G0218 Trochodendron aralioides HOM05D000226 ORTHO05D000142 8.2e-06 55.1 146 28.8
TAR374G0286 Trochodendron aralioides HOM05D000226 ORTHO05D000142 8.2e-06 55.1 146 28.8


User provided reference genes

Program Settings