Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g014930.1 Solanum lycopersicum HOM05D007559 ORTHO05D009642 9.2e-167 590.9 291 100.0
Sopen09g007840 Solanum pennellii HOM05D007559 ORTHO05D009642 1.6e-158 563.5 286 96.9
PGSC0003DMG400026609 Solanum tuberosum HOM05D007559 ORTHO05D009642 2.3e-149 533.1 291 90.0
CAN.G481.10 Capsicum annuum HOM05D007559 ORTHO05D009642 3.9e-125 452.6 291 79.0
Dinv35437 Davidia involucrata HOM05D007559 ORTHO05D009642 3.3e-71 273.5 274 54.7
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 2.3e-69 267.3 266 53.8
Haze_21112 Corylus avellana HOM05D007559 ORTHO05D009642 6.6e-64 249.2 277 46.9
Cfa017088 Carpinus fangiana HOM05D007559 ORTHO05D009642 1.1e-63 248.4 277 46.9
MSTRG.5528 Avicennia marina HOM05D007559 ORTHO05D009642 2.5e-63 247.3 298 46.6
Sabra06G0082800 Salix brachista HOM05D007559 ORTHO05D009642 4.7e-62 243.0 276 48.2
Potri.006G106400 Populus trichocarpa HOM05D007559 ORTHO05D009642 1.8e-61 241.1 268 49.3
Phvul.008G089500 Phaseolus vulgaris HOM05D007559 ORTHO05D009642 8.9e-61 238.8 273 46.9
Lsat_1_v5_gn_7_12941 Lactuca sativa HOM05D007559 ORTHO05D009642 3.4e-60 236.9 272 48.5
VMungo1383G3445 Vigna mungo HOM05D007559 ORTHO05D009642 4.4e-60 236.5 277 46.9
Eucgr.A00644 Eucalyptus grandis HOM05D007559 ORTHO05D009642 9.8e-60 235.3 277 46.2
SGA_v2.0_scaffold85G26664 Striga asiatica HOM05D007559 ORTHO05D009642 1.7e-59 234.6 278 48.6
FAN05G3361 Fragaria x ananassa HOM05D007559 ORTHO05D009642 2.2e-59 234.2 270 44.8
CANSAT35G1217 Cannabis sativa HOM05D007559 ORTHO05D009642 3.7e-59 233.4 278 47.5
Ca_07735_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 3.7e-59 233.4 277 45.5
Phvul.009G202600 Phaseolus vulgaris HOM05D007559 ORTHO05D009642 3.7e-59 233.4 272 45.6
FAN09G3233 Fragaria x ananassa HOM05D007559 ORTHO05D009642 4.9e-59 233.0 270 44.8
Lj1g0021884 Lotus japonicus HOM05D007559 ORTHO05D009642 1.4e-58 231.5 281 45.2
Nitab4.5_0003592g0030 Nicotiana tabacum HOM05D007559 ORTHO05D009642 4.1e-58 229.9 144 79.2
Prupe.6G287300 Prunus persica HOM05D007559 ORTHO05D009642 7.0e-58 229.2 265 43.0
FvH4_6g10340 Fragaria vesca HOM05D007559 ORTHO05D009642 9.2e-58 228.8 267 44.6
TAR623G1207 Trochodendron aralioides HOM05D007559 ORTHO05D009642 9.2e-58 228.8 263 47.1
Glyma.09G279300 Glycine max HOM05D007559 ORTHO05D009642 1.6e-57 228.0 276 46.0
FAN14G4426 Fragaria x ananassa HOM05D007559 ORTHO05D009642 2.0e-57 227.6 267 44.2
FAN02G3738 Fragaria x ananassa HOM05D007559 ORTHO05D009642 3.5e-57 226.9 265 44.5
FAN09G4021 Fragaria x ananassa HOM05D007559 ORTHO05D009642 4.6e-57 226.5 265 44.5
SalBow6G7175 Salvia bowleyana HOM05D007559 ORTHO05D009642 1.0e-56 225.3 288 45.1
MD12G1182800 Malus domestica HOM05D007559 ORTHO05D009642 1.7e-56 224.6 266 45.5
Migut.J00080 Erythranthe guttata HOM05D007559 ORTHO05D009642 2.3e-56 224.2 284 44.4
TPR.G18675 Trifolium pratense HOM05D007559 ORTHO05D009642 2.3e-56 224.2 270 44.4
Thecc.05G003800 Theobroma cacao HOM05D007559 ORTHO05D009642 3.9e-56 223.4 265 45.3
Ciclev10013613m.g Citrus clementina HOM05D007559 ORTHO05D009642 5.0e-56 223.0 271 46.5
TAR623G1276 Trochodendron aralioides HOM05D007559 ORTHO05D009642 6.6e-56 222.6 259 46.7
Psat3g121880 Pisum sativum HOM05D007559 ORTHO05D009642 8.6e-56 222.2 277 44.4
MD04G1169100 Malus domestica HOM05D007559 ORTHO05D009642 1.5e-55 221.5 270 43.7
Ah.08g209840 Amaranthus hybridus HOM05D007559 ORTHO05D009642 3.3e-55 220.3 285 44.6
HanXRQChr12g0363701 Helianthus annuus HOM05D007559 ORTHO05D009642 3.3e-55 220.3 268 47.0
Lalb_Chr05g0229371 Lupinus albus HOM05D007559 ORTHO05D009642 5.6e-55 219.5 277 44.4
Nitab4.5_0000047g0060 Nicotiana tabacum HOM05D007559 ORTHO05D009642 5.6e-55 219.5 144 77.8
Sc02g0000710 Simmondsia chinensis HOM05D007559 ORTHO05D009642 1.2e-54 218.4 273 43.2
Medtr7g072070 Medicago truncatula HOM05D007559 ORTHO05D009642 1.6e-54 218.0 270 44.8
TAR623G0780 Trochodendron aralioides HOM05D007559 ORTHO05D009642 1.6e-54 218.0 242 47.9
Manes.09G114100 Manihot esculenta HOM05D007559 ORTHO05D009642 2.8e-54 217.2 268 44.0
CsaV3_3G033270 Cucumis sativus L. HOM05D007559 ORTHO05D009642 2.3e-53 214.2 272 44.1
Nn2g13304 Nelumbo nucifera HOM05D007559 ORTHO05D009642 1.2e-52 211.8 267 45.3
DCAR_028899 Daucus carota HOM05D007559 ORTHO05D009642 2.6e-52 210.7 207 51.7
Sed0024504 Sechium edule HOM05D007559 ORTHO05D009642 7.5e-52 209.1 274 43.4
COL.COLO4_14426 Corchorus olitorius HOM05D007559 ORTHO05D009642 1.3e-51 208.4 268 42.2
Aqoxy2G02373 Aquilegia oxysepala HOM05D007559 ORTHO05D009642 2.9e-51 207.2 278 42.8
Atru.chr8.2360 Acer truncatum HOM05D007559 ORTHO05D009642 4.9e-51 206.5 271 42.1
Duzib128G0753 Durio zibethinus HOM05D007559 ORTHO05D009642 4.1e-50 203.4 266 42.1
MELO3C031038.2 Cucumis melo HOM05D007559 ORTHO05D009642 1.2e-49 201.8 272 41.2
TWI77G1038 Tripterygium wilfordii HOM05D007559 ORTHO05D009642 4.6e-49 199.9 269 42.0
Gorai.002G267400 Gossypium raimondii HOM05D007559 ORTHO05D009642 1.2e-46 191.8 265 40.0
Gohir.A01G230700 Gossypium hirsutum HOM05D007559 ORTHO05D009642 2.8e-46 190.7 265 40.0
PSO384G3238 Papaver somniferum HOM05D007559 ORTHO05D009642 2.8e-46 190.7 267 43.1
MBI15_g13921_MAGBIO Magnolia biondii HOM05D007559 ORTHO05D009642 2.0e-44 184.5 248 42.3
QL07p033351 Quercus lobata HOM05D007559 ORTHO05D009642 1.7e-43 181.4 225 41.8
MBI02_g41148_MAGBIO Magnolia biondii HOM05D007559 ORTHO05D009642 1.4e-42 178.3 247 41.3
Sp4g20740 Schrenkiella parvula HOM05D007559 ORTHO05D009642 2.1e-41 174.5 269 38.3
PSO339G0892 Papaver somniferum HOM05D007559 ORTHO05D009642 2.7e-41 174.1 237 43.0
C04p09160 Brassica napus HOM05D007559 ORTHO05D009642 4.6e-41 173.3 260 39.6
BolC4t22525H Brassica oleracea HOM05D007559 ORTHO05D009642 6.0e-41 172.9 260 39.2
Lj2C64T2 Lonicera japonica HOM05D007559 ORTHO05D009642 6.0e-41 172.9 145 58.6
BcaB02g09190 Brassica carinata HOM05D007559 ORTHO05D009642 7.8e-41 172.6 262 38.2
CDE04G2050 Ceratophyllum demersum HOM05D007559 ORTHO05D009642 1.0e-40 172.2 224 42.9
AL4G35690 Arabidopsis lyrata HOM05D007559 ORTHO05D009642 1.3e-40 171.8 269 38.7
AT2G38420 Arabidopsis thaliana HOM05D007559 ORTHO05D009642 2.3e-40 171.0 269 39.4
BraA05t19732Z Brassica rapa HOM05D007559 ORTHO05D009642 8.6e-40 169.1 258 38.4
Thhalv10017948m.g Eutrema salsugineum HOM05D007559 ORTHO05D009642 1.1e-39 168.7 272 40.1
A05p07630 Brassica napus HOM05D007559 ORTHO05D009642 5.6e-39 166.4 258 38.0
CARHR133080 Cardamine hirsuta HOM05D007559 ORTHO05D009642 9.6e-39 165.6 262 38.5
SHI27995 Sapria himalayana HOM05D007559 ORTHO05D009642 8.1e-38 162.5 282 35.5
CANSAT80G0499 Cannabis sativa HOM05D007559 ORTHO05D009642 8.7e-32 142.5 168 47.0
Actinidia32551 Actinidia chinensis HOM05D007559 ORTHO05D009642 1.5e-31 141.7 145 54.5
Aa31LG5G23900 Aethionema arabicum HOM05D007559 ORTHO05D009642 4.0e-29 133.7 271 35.1
AUR62006326 Chenopodium quinoa HOM05D007559 ORTHO05D009642 2.9e-27 127.5 143 46.9
MBI02_g32067_MAGBIO Magnolia biondii HOM05D004088 ORTHO05D004736 5.4e-26 123.2 138 43.5
EL10Ac7g17033 Beta vulgaris HOM05D007559 ORTHO05D009642 2.1e-25 121.3 146 41.1
Glyma.18G209700 Glycine max HOM05D007559 ORTHO05D009642 3.4e-20 104.0 109 49.5
TAR623G0609 Trochodendron aralioides HOM05D007559 ORTHO05D009642 4.5e-20 103.6 110 50.0
Sabra04G0101500 Salix brachista HOM05D007559 ORTHO05D009642 9.6e-15 85.9 82 53.7
Sabra01G0114900 Salix brachista HOM05D007559 ORTHO05D009642 1.1e-13 82.4 71 57.7
MBI15_g43141_MAGBIO Magnolia biondii HOM05D007559 ORTHO05D009642 2.4e-13 81.3 94 43.6
ECA236G1374 Erigeron canadensis HOM05D007559 ORTHO05D009642 1.4e-10 72.0 98 38.8
Os04g0618050 Oryza sativa ssp. japonica HOM05D007085 ORTHO05D008828 3.9e-08 63.9 110 35.5
CsaV3_4G032750 Cucumis sativus L. HOM05D002453 ORTHO05D008746 6.7e-08 63.2 225 27.6
Ca_07722_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 1.5e-07 62.0 73 41.1
Ca_07728_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 1.5e-07 62.0 73 41.1
EL10Ac4g08466 Beta vulgaris HOM05D007085 ORTHO05D008828 5.7e-07 60.1 183 28.4
QL04p053388 Quercus lobata HOM05D002391 ORTHO05D003966 7.4e-07 59.7 94 29.8
MD01G1088700 Malus domestica HOM05D002391 ORTHO05D003966 9.7e-07 59.3 102 31.4
QL08p056726 Quercus lobata HOM05D002453 ORTHO05D008746 1.3e-06 58.9 128 31.2
ATR0829G167 Amborella trichopoda HOM05D007559 ORTHO05D009642 2.8e-06 57.8 83 41.0
Sabra15G0076800 Salix brachista HOM05D005025 ORTHO05D006499 2.8e-06 57.8 50 54.0
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 3.7e-06 57.4 235 24.7
Zm00001eb431040 Zea mays HOM05D007085 ORTHO05D008828 3.7e-06 57.4 122 31.1
Peaxi162Scf00103g00021 Petunia axillaris HOM05D002453 ORTHO05D002107 4.8e-06 57.0 159 28.3
Prupe.2G196300 Prunus persica HOM05D002391 ORTHO05D003966 4.8e-06 57.0 94 31.9
Ah.04g163870 Amaranthus hybridus HOM05D007085 ORTHO05D008828 6.3e-06 56.6 184 26.1
Sabra14G0078000 Salix brachista HOM05D002391 ORTHO05D003966 6.3e-06 56.6 99 28.3
Actinidia03646 Actinidia chinensis HOM05D007085 ORTHO05D008828 8.2e-06 56.2 201 26.4
Cc05_g10980 Coffea canephora HOM05D002453 ORTHO05D008746 8.2e-06 56.2 142 28.9
Rhsim04G0082900 Rhododendron simsii HOM05D000002 ORTHO05D000047 8.2e-06 56.2 73 38.4


User provided reference genes

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