Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g011190.1 Solanum lycopersicum HOM05D007574 ORTHO05D007552 7.1e-53 210.3 104 100.0
Sopen09g005930 Solanum pennellii HOM05D007574 ORTHO05D007552 2.1e-52 208.8 104 99.0
PGSC0003DMG400008893 Solanum tuberosum HOM05D007574 ORTHO05D007552 7.8e-52 206.8 104 98.1
Nitab4.5_0004598g0040 Nicotiana tabacum HOM05D007574 ORTHO05D007552 7.2e-21 104.0 91 67.0
Peaxi162Scf00330g00113 Petunia axillaris HOM05D007574 ORTHO05D007552 1.0e-19 100.1 105 61.9
PGSC0003DMG400019195 Solanum tuberosum HOM05D007574 ORTHO05D007552 2.4e-16 89.0 103 53.4
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 6.5e-14 80.9 99 53.5
Nitab4.5_0004744g0030 Nicotiana tabacum HOM05D007574 ORTHO05D007552 6.5e-14 80.9 86 57.0
Dinv37135 Davidia involucrata HOM05D007574 ORTHO05D007552 3.6e-12 75.1 76 60.5
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 7.9e-12 73.9 103 45.6
Prupe.6G261000 Prunus persica HOM05D007574 ORTHO05D007552 7.9e-12 73.9 77 51.9
QL07p028963 Quercus lobata HOM05D007574 ORTHO05D007552 1.4e-11 73.2 94 51.1
QL07p029642 Quercus lobata HOM05D007574 ORTHO05D007552 1.4e-11 73.2 94 51.1
CSS0039527 Camellia sinensis var. sinensis HOM05D007574 ORTHO05D007552 3.9e-11 71.6 59 66.1
CiPaw.09G197900 Carya illinoinensis HOM05D007574 ORTHO05D007552 3.9e-11 71.6 102 46.1
GSVIVG01034109001 Vitis vinifera HOM05D007574 ORTHO05D007552 3.9e-11 71.6 103 44.7
CiPaw.10G148000 Carya illinoinensis HOM05D007574 ORTHO05D007552 5.1e-11 71.2 87 50.6
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 4.3e-10 68.2 104 46.2
PGR031G1556 Punica granatum HOM05D007574 ORTHO05D007552 4.3e-10 68.2 74 55.4
FAN05G1951 Fragaria x ananassa HOM05D007574 ORTHO05D007552 5.7e-10 67.8 97 51.5
Manes.08G080600 Manihot esculenta HOM05D007574 ORTHO05D007552 5.7e-10 67.8 93 47.3
Eucgr.B02706 Eucalyptus grandis HOM05D007574 ORTHO05D007552 7.4e-10 67.4 107 42.1
Ciclev10013212m.g Citrus clementina HOM05D007574 ORTHO05D007552 9.7e-10 67.0 76 53.9
FAN09G4076 Fragaria x ananassa HOM05D007574 ORTHO05D007552 9.7e-10 67.0 80 52.5
Hma1.2p1_0766F.1_g215190 Hydrangea macrophylla HOM05D007574 ORTHO05D007552 9.7e-10 67.0 83 51.8
MBI05_g35175_MAGBIO Magnolia biondii HOM05D007574 ORTHO05D007552 1.3e-09 66.6 73 56.2
TAR623G1460 Trochodendron aralioides HOM05D007574 ORTHO05D007552 2.2e-09 65.9 102 40.2
Duzib128G0069 Durio zibethinus HOM05D007574 ORTHO05D007552 2.8e-09 65.5 78 55.1
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 2.8e-09 65.5 101 47.5
Duzib106G1300 Durio zibethinus HOM05D007574 ORTHO05D007552 3.7e-09 65.1 87 50.6
Glyma.01G102300 Glycine max HOM05D007574 ORTHO05D007552 3.7e-09 65.1 85 50.6
RcHm_v2.0_Chr3g0465351 Rosa chinensis HOM05D007574 ORTHO05D007552 3.7e-09 65.1 97 48.5
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 3.7e-09 65.1 78 47.4
TAR633G0850 Trochodendron aralioides HOM05D007574 ORTHO05D007552 3.7e-09 65.1 103 45.6
Solyc10g086630.2 Solanum lycopersicum HOM05D007574 ORTHO05D007552 6.3e-09 64.3 94 44.7
Aqoxy2G02344 Aquilegia oxysepala HOM05D007574 ORTHO05D007552 8.2e-09 63.9 102 42.2
Nn2g11240 Nelumbo nucifera HOM05D007574 ORTHO05D007552 8.2e-09 63.9 85 47.1
MD04G1135900 Malus domestica HOM05D007574 ORTHO05D007552 1.4e-08 63.2 85 48.2
Sopen10g036030 Solanum pennellii HOM05D007574 ORTHO05D007552 1.4e-08 63.2 102 44.1
Cpa.g.c39617 Carica papaya HOM05D007574 ORTHO05D007552 1.8e-08 62.8 94 47.9
Thecc.05G033200 Theobroma cacao HOM05D007574 ORTHO05D007552 1.8e-08 62.8 104 46.2
Gohir.D01G210600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.4e-08 62.4 104 47.1
Gorai.002G256300 Gossypium raimondii HOM05D007574 ORTHO05D007552 2.4e-08 62.4 104 47.1
Nn2g13483 Nelumbo nucifera HOM05D007574 ORTHO05D007552 4.1e-08 61.6 78 47.4
Oeu001849.1 Olea europaea HOM05D007574 ORTHO05D007552 4.1e-08 61.6 97 45.4
Phvul.010G016401 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 6.9e-08 60.8 100 45.0
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 6.9e-08 60.8 101 40.6
Lj3g0003670 Lotus japonicus HOM05D007574 ORTHO05D007552 9.1e-08 60.5 95 47.4
THA.LOC109116793 Tarenaya hassleriana HOM05D009057 ORTHO05D011698 9.1e-08 60.5 74 47.3
MD12G1149400 Malus domestica HOM05D007574 ORTHO05D007552 1.2e-07 60.1 61 59.0
ATR0665G027 Amborella trichopoda HOM05D007574 ORTHO05D007552 1.5e-07 59.7 76 50.0
Gohir.D04G123600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 1.5e-07 59.7 108 45.4
Glyma.03G067200 Glycine max HOM05D007574 ORTHO05D007552 2.0e-07 59.3 92 46.7
Gohir.A01G221600 Gossypium hirsutum HOM05D007574 ORTHO05D007552 2.0e-07 59.3 74 55.4
Gorai.012G106400 Gossypium raimondii HOM05D007574 ORTHO05D007552 2.6e-07 58.9 108 43.5
Phvul.008G115600 Phaseolus vulgaris HOM05D007574 ORTHO05D007552 2.6e-07 58.9 82 47.6
Eucgr.K03060 Eucalyptus grandis HOM05D007574 ORTHO05D007552 4.5e-07 58.2 94 41.5
PSO675G0145 Papaver somniferum HOM05D007574 ORTHO05D007552 4.5e-07 58.2 91 44.0
Rhsim05G0198100 Rhododendron simsii HOM05D007574 ORTHO05D007552 5.9e-07 57.8 86 46.5
AT2G37750 Arabidopsis thaliana HOM05D009505 ORTHO05D007552 1.7e-06 56.2 89 44.9
Lalb_Chr19g0125161 Lupinus albus HOM05D007574 ORTHO05D007552 1.7e-06 56.2 52 61.5
TPR.G5586 Trifolium pratense HOM05D007574 ORTHO05D007552 2.2e-06 55.8 102 42.2
Atru.chr8.2045 Acer truncatum HOM05D007574 ORTHO05D007552 2.9e-06 55.5 53 52.8
Os05g0456900 Oryza sativa ssp. japonica HOM05D007574 ORTHO05D007552 3.8e-06 55.1 50 50.0
Rhsim05G0196100 Rhododendron simsii HOM05D007574 ORTHO05D007552 3.8e-06 55.1 86 44.2
SalBow5G2190 Salvia bowleyana HOM05D007574 ORTHO05D007552 3.8e-06 55.1 58 53.4
Lalb_Chr03g0042511 Lupinus albus HOM05D007574 ORTHO05D007552 5.0e-06 54.7 70 52.9
Os01g0143900 Oryza sativa ssp. japonica HOM05D007574 ORTHO05D007552 5.0e-06 54.7 67 44.8
DCAR_012128 Daucus carota HOM05D007574 ORTHO05D007552 6.5e-06 54.3 50 54.0


User provided reference genes

Program Settings