Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g010890.1 Solanum lycopersicum HOM05D001033 ORTHO05D005438 1.5e-26 122.1 62 100.0
CAN.G397.97 Capsicum annuum HOM05D001033 ORTHO05D005438 2.7e-15 84.7 52 84.6
CAN.G835.10 Capsicum annuum HOM05D001033 ORTHO05D005438 2.7e-15 84.7 52 84.6
Peaxi162Scf00334g01211 Petunia axillaris HOM05D001033 ORTHO05D002045 3.0e-14 81.3 52 80.8
RcHm_v2.0_CPg0502161 Rosa chinensis HOM05D001033 ORTHO05D005438 1.1e-13 79.3 46 82.6
Nitab4.5_0002149g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.3e-13 77.8 46 89.1
Hma1.2p1_2223F.1_g317430 Hydrangea macrophylla HOM05D001033 ORTHO05D005438 1.2e-12 75.9 52 73.1
DCAR_032489 Daucus carota HOM05D001033 ORTHO05D005438 2.8e-12 74.7 52 71.2
LjContig00318g0006081 Lotus japonicus HOM05D001033 ORTHO05D005438 4.7e-12 73.9 52 73.1
Phvul.011G056516 Phaseolus vulgaris HOM05D001033 ORTHO05D005438 4.7e-12 73.9 52 73.1
VMungo0498G0001 Vigna mungo HOM05D001033 ORTHO05D005438 4.7e-12 73.9 52 73.1
Lalb_Chr03g0039391 Lupinus albus HOM05D001033 ORTHO05D005438 6.2e-12 73.6 52 73.1
Lalb_Chr07g0192301 Lupinus albus HOM05D001033 ORTHO05D005438 6.2e-12 73.6 52 73.1
PGR111G0123 Punica granatum HOM05D001033 ORTHO05D005438 6.2e-12 73.6 52 71.2
EL10As12g24023 Beta vulgaris HOM05D001033 ORTHO05D005438 1.1e-11 72.8 52 71.2
EL10As1g23050 Beta vulgaris HOM05D001033 ORTHO05D005438 1.1e-11 72.8 52 71.2
Medtr3g035740 Medicago truncatula HOM05D001033 ORTHO05D005438 1.1e-11 72.8 52 71.2
Medtr4g051245 Medicago truncatula HOM05D001033 ORTHO05D005438 1.1e-11 72.8 52 71.2
PSO548G0108 Papaver somniferum HOM05D001033 ORTHO05D005438 1.1e-11 72.8 52 71.2
Glyma.13G068600 Glycine max HOM05D001033 ORTHO05D005438 1.4e-11 72.4 52 71.2
Eucgr.A02745 Eucalyptus grandis HOM05D001033 ORTHO05D005438 1.8e-11 72.0 52 71.2
Gohir.1Z049599 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.8e-11 72.0 52 71.2
Gohir.D01G102268 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.8e-11 72.0 52 71.2
Gohir.D04G084000 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.8e-11 72.0 52 71.2
HanXRQChr00c0345g0573911 Helianthus annuus HOM05D001033 ORTHO05D005438 1.8e-11 72.0 52 71.2
HanXRQChr00c0702g0576861 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
HanXRQChr00c0759g0577221 Helianthus annuus HOM05D001033 ORTHO05D005438 1.8e-11 72.0 52 71.2
HanXRQChr02g0041511 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
HanXRQChr02g0044941 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
HanXRQChr07g0201001 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
HanXRQChr08g0210311 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
HanXRQChr10g0283501 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
HanXRQChr10g0289221 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
HanXRQChr11g0326771 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
HanXRQChr11g0348981 Helianthus annuus HOM05D001033 ORTHO05D005438 1.8e-11 72.0 52 71.2
HanXRQChr14g0454411 Helianthus annuus HOM05D001033 ORTHO05D005438 1.8e-11 72.0 52 71.2
HanXRQCPg0579981 Helianthus annuus HOM05D001033 ORTHO05D002045 1.8e-11 72.0 52 71.2
Gohir.A10G087950 Gossypium hirsutum HOM05D001033 ORTHO05D005438 2.3e-11 71.6 52 71.2
SalBow1G1818 Salvia bowleyana HOM05D001033 ORTHO05D005438 2.3e-11 71.6 52 71.2
CARHR282060 Cardamine hirsuta HOM05D001033 ORTHO05D005438 3.1e-11 71.2 52 67.3
Nn010s41425 Nelumbo nucifera HOM05D001033 ORTHO05D005438 3.1e-11 71.2 52 69.2
Potri.013G163000 Populus trichocarpa HOM05D001033 ORTHO05D005438 3.1e-11 71.2 52 69.2
QL93p0270_0001 Quercus lobata HOM05D001033 ORTHO05D005438 6.8e-11 70.1 52 67.3
BNapus_Darmor_BZH_scaffold_253p00180 Brassica napus HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BNapus_Darmor_BZH_scaffold_287p00100 Brassica napus HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
C02p43490 Brassica napus HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
C04p22580 Brassica napus HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
C09p40500 Brassica napus HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BolSC45t60863H Brassica oleracea HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BolSC45t60948H Brassica oleracea HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BolSC46t60995H Brassica oleracea HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BolSC46t61040H Brassica oleracea HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BolSC47t61102H Brassica oleracea HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BraSC25t45843Z Brassica rapa HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BraSC25t45872Z Brassica rapa HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BraSC58t46415Z Brassica rapa HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
BraSC59t46597Z Brassica rapa HOM05D001033 ORTHO05D005438 8.9e-11 69.7 52 65.4
Gohir.A09G102300 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.2e-10 69.3 52 69.2
BolC7t41722H Brassica oleracea HOM05D001033 ORTHO05D005438 1.5e-10 68.9 52 65.4
Thhalv10010825m.g Eutrema salsugineum HOM05D001033 ORTHO05D005438 1.5e-10 68.9 52 65.4
AL2G20690 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.6e-10 68.2 52 63.5
AL2G21100 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.6e-10 68.2 52 63.5
AL2G21480 Arabidopsis lyrata HOM05D001033 ORTHO05D005438 2.6e-10 68.2 52 63.5
ATCG00440 Arabidopsis thaliana HOM05D001033 ORTHO05D005438 2.6e-10 68.2 52 63.5
BolC7t41667H Brassica oleracea HOM05D001033 ORTHO05D005438 4.4e-10 67.4 52 63.5
Oeu028781.1 Olea europaea HOM05D001033 ORTHO05D005438 5.8e-10 67.0 44 79.5
Gohir.A07G060600 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.3e-09 65.9 51 66.7
Medtr5g090760 Medicago truncatula HOM05D000680 ORTHO05D005619 3.7e-09 64.3 53 64.2
EL10Ac5g11371 Beta vulgaris HOM05D001033 ORTHO05D005438 8.3e-09 63.2 50 66.0
HanXRQChr04g0118141 Helianthus annuus HOM05D001033 ORTHO05D005438 2.4e-08 61.6 37 78.4
Gohir.D05G268250 Gossypium hirsutum HOM05D001033 ORTHO05D005438 1.6e-07 58.9 52 59.6
Gorai.009G280700 Gossypium raimondii HOM05D001033 ORTHO05D005438 2.1e-07 58.5 52 59.6
BcaB02g11351 Brassica carinata HOM05D001033 ORTHO05D002045 3.5e-07 57.8 46 63.0
BcaC04g20697 Brassica carinata HOM05D001033 ORTHO05D002045 3.5e-07 57.8 46 63.0
BcaC05g28797 Brassica carinata HOM05D001033 ORTHO05D002045 3.5e-07 57.8 46 63.0
Lalb_Chr01g0022731 Lupinus albus HOM05D001033 ORTHO05D005438 2.3e-06 55.1 48 62.5


User provided reference genes

Program Settings