Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 3.0e-279 964.5 491 100.0
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 4.3e-257 891.0 511 90.4
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 3.0e-250 868.2 511 88.1
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 6.4e-229 797.3 511 80.8
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.7e-227 792.0 518 79.0
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 1.2e-219 766.5 533 74.5
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.2e-181 639.4 515 63.1
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 3.8e-181 638.6 517 62.9
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.0e-178 630.6 511 63.4
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.1e-177 627.1 514 62.8
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 3.7e-176 622.1 512 60.2
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 2.4e-175 619.4 512 60.9
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 2.4e-175 619.4 512 61.9
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 7.0e-175 617.8 511 60.9
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 9.1e-175 617.5 510 61.8
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.0e-174 616.3 516 60.3
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 2.6e-174 615.9 513 62.0
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 5.9e-174 614.8 526 61.0
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 7.7e-174 614.4 511 60.5
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.7e-173 613.2 513 60.4
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 3.8e-173 612.1 511 61.1
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 1.1e-172 610.5 512 61.7
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 1.4e-172 610.1 515 59.4
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 3.2e-172 609.0 512 59.6
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 3.2e-172 609.0 512 59.6
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 4.2e-172 608.6 511 61.3
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 9.4e-172 607.4 509 61.3
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 9.4e-172 607.4 510 60.4
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 3.6e-171 605.5 552 57.4
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 4.7e-171 605.1 511 60.7
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 4.7e-171 605.1 509 59.1
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 8.0e-171 604.4 511 59.5
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.4e-170 603.6 510 61.2
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.8e-170 603.2 508 59.1
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.3e-170 602.8 509 60.9
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 2.3e-170 602.8 507 60.4
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 6.7e-170 601.3 530 58.5
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 1.1e-169 600.5 511 59.9
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 2.6e-169 599.4 511 59.7
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 5.7e-169 598.2 511 60.5
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 7.4e-169 597.8 511 58.5
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 9.7e-169 597.4 509 58.7
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 3.7e-168 595.5 511 58.1
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 1.8e-167 593.2 510 58.4
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 9.1e-167 590.9 513 57.7
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 2.0e-166 589.7 509 59.9
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 4.5e-166 588.6 556 56.1
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 1.0e-165 587.4 514 57.0
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 1.0e-165 587.4 512 56.4
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 1.5e-164 583.6 511 58.9
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.2e-163 580.5 512 57.0
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 6.1e-163 578.2 511 57.9
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 4.0e-162 575.5 511 59.1
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 8.8e-162 574.3 523 57.9
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 1.2e-161 573.9 507 58.4
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 4.4e-161 572.0 513 56.3
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 1.7e-160 570.1 490 59.2
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 2.8e-160 569.3 513 56.5
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 3.7e-160 568.9 511 57.1
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 1.8e-159 566.6 512 56.8
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.1e-159 565.8 540 56.1
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 1.6e-158 563.5 508 55.7
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 5.9e-158 561.6 509 56.0
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 7.7e-158 561.2 512 56.1
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 3.8e-157 558.9 511 55.6
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 3.8e-157 558.9 509 56.2
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 1.1e-156 557.4 511 56.4
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.5e-156 557.0 511 55.8
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 1.5e-156 557.0 517 54.7
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 7.2e-156 554.7 509 55.4
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 9.4e-156 554.3 519 57.2
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 2.1e-155 553.1 491 58.9
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 3.6e-155 552.4 510 55.3
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 6.1e-155 551.6 511 54.8
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 8.0e-155 551.2 491 58.2
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 2.0e-153 546.6 520 53.5
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 9.8e-153 544.3 511 54.2
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 1.7e-152 543.5 507 54.4
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 1.7e-152 543.5 507 54.4
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 6.3e-152 541.6 462 61.5
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 2.4e-151 539.7 484 56.6
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 3.1e-151 539.3 507 53.3
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 1.5e-148 530.4 437 62.9
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 1.5e-148 530.4 501 54.7
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 2.8e-147 526.2 427 63.0
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 8.0e-147 524.6 577 48.9
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 5.2e-146 521.9 513 50.7
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 4.1e-143 512.3 478 55.0
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 4.1e-143 512.3 461 59.0
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.2e-142 510.8 591 47.9
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 2.5e-140 503.1 527 50.1
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 3.3e-140 502.7 453 58.3
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 2.7e-134 483.0 533 50.8
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 5.2e-130 468.8 458 54.8
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.5e-129 467.2 491 50.1
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 1.6e-123 447.2 520 45.6
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.9e-119 433.7 465 46.9
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 2.4e-119 433.3 386 57.0
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 3.0e-109 399.8 510 41.8
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 6.6e-109 398.7 340 61.2
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.5e-108 397.5 374 56.4
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.0e-97 360.5 216 86.1
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.8e-93 347.4 529 37.4
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 1.4e-90 337.8 410 47.6
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 2.3e-85 320.5 387 46.5
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 9.6e-84 315.1 326 52.1
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 3.1e-82 310.1 336 48.2
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.2e-81 308.1 379 46.4
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 1.6e-78 297.7 451 41.5
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 1.6e-70 271.2 317 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 2.7e-70 270.4 457 37.4
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 5.7e-68 262.7 196 65.3
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 2.3e-61 240.7 432 40.0
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 4.8e-59 233.0 382 38.5
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 3.5e-57 226.9 520 31.2
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.5e-55 220.7 156 66.7
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.7e-51 208.0 355 35.5
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 8.0e-46 189.1 135 66.7
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 1.2e-44 185.3 137 64.2
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 4.0e-37 160.2 116 69.0
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 4.0e-37 160.2 116 69.0
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 3.1e-34 150.6 495 29.3
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 8.3e-27 125.9 188 36.7
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 1.8e-21 108.2 60 80.0
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 8.3e-19 99.4 65 70.8
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 1.4e-18 98.6 113 46.0
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 3.2e-18 97.4 64 70.3
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 3.2e-18 97.4 64 70.3
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 1.6e-17 95.1 219 32.0
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 6.0e-17 93.2 53 75.5
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 7.8e-17 92.8 55 67.3
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 9.5e-15 85.9 66 62.1
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 3.1e-13 80.9 65 58.5
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 5.6e-07 60.1 73 38.4


User provided reference genes

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