Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.5e-189 666.0 330 100.0
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 6.3e-172 607.4 306 99.0
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 1.4e-166 589.7 306 96.1
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 4.5e-109 398.7 269 77.3
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.8e-109 398.3 312 70.2
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 2.5e-99 366.3 306 68.3
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 4.2e-99 365.5 324 65.1
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 2.7e-98 362.8 312 66.7
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.2e-95 351.7 308 64.3
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 2.6e-93 346.3 309 61.5
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 5.8e-93 345.1 315 63.8
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.7e-92 343.6 308 65.6
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.5e-91 338.6 308 63.3
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.0e-89 334.3 317 60.6
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 3.9e-89 332.4 320 60.0
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 3.9e-89 332.4 312 61.5
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 3.1e-86 322.8 303 62.0
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 5.3e-86 322.0 312 60.3
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 9.0e-86 321.2 304 60.5
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.2e-85 320.9 315 60.0
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 5.9e-85 318.5 308 60.4
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 5.9e-85 318.5 301 61.1
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.7e-84 317.0 292 62.7
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 2.9e-84 316.2 311 59.2
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 8.5e-84 314.7 304 61.5
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 8.5e-84 314.7 313 58.8
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 1.6e-82 310.5 309 60.5
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.1e-82 310.1 323 58.2
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 6.1e-82 308.5 304 57.2
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.4e-81 307.4 322 58.1
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.4e-81 307.4 319 57.4
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 5.1e-81 305.4 304 59.9
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 8.8e-81 304.7 305 59.7
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.5e-80 303.9 297 55.9
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 2.5e-80 303.1 315 58.7
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 2.5e-80 303.1 315 56.2
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 9.7e-80 301.2 311 58.5
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.3e-79 300.8 322 55.6
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.7e-79 300.4 324 55.2
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 2.2e-79 300.1 320 56.6
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 2.8e-79 299.7 311 56.3
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 3.7e-79 299.3 297 59.3
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.8e-78 297.0 304 57.2
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 2.4e-78 296.6 316 57.3
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 3.1e-78 296.2 295 60.0
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 4.1e-78 295.8 306 56.5
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 5.3e-78 295.4 304 55.6
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 9.1e-78 294.7 301 57.8
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.2e-77 294.3 295 59.0
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.2e-77 294.3 303 56.4
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 2.0e-77 293.5 307 54.4
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 2.0e-77 293.5 334 52.4
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 2.6e-77 293.1 320 53.4
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.3e-76 290.8 307 55.4
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.8e-76 289.3 299 59.5
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 5.0e-76 288.9 295 56.9
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.0e-76 288.9 307 55.4
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 8.5e-76 288.1 330 53.0
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.4e-75 287.3 307 55.0
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 3.2e-75 286.2 306 53.3
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 4.2e-75 285.8 306 53.3
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 7.2e-75 285.0 317 55.2
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.6e-74 283.9 306 54.9
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.6e-74 283.9 306 54.9
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 2.1e-74 283.5 299 56.5
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 3.6e-74 282.7 312 55.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 7.9e-74 281.6 331 51.7
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 1.4e-73 280.8 303 52.1
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 5.1e-73 278.9 300 56.3
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.0e-72 276.9 312 54.2
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.4e-72 275.8 305 53.4
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 2.8e-71 273.1 311 54.0
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 2.8e-71 273.1 295 53.2
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 6.3e-71 271.9 287 57.1
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.8e-70 270.4 340 50.3
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 3.1e-70 269.6 310 52.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 9.1e-70 268.1 301 53.5
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.5e-69 267.3 290 54.8
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 3.5e-69 266.2 336 50.9
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 8.5e-68 261.5 286 53.1
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.1e-67 261.2 303 53.1
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 1.4e-65 254.2 356 47.2
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.4e-65 254.2 382 44.8
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 3.9e-65 252.7 301 52.8
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 3.3e-64 249.6 331 49.5
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 9.7e-64 248.1 289 50.5
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 5.2e-57 225.7 122 85.2
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.3e-55 218.8 192 64.1
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 4.5e-53 212.6 294 48.0
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 5.0e-52 209.1 111 87.4
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.9e-51 207.2 109 84.4
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 2.7e-50 203.4 263 52.5
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 1.4e-49 201.1 110 82.7
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.3e-49 200.3 312 46.2
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 9.8e-48 194.9 287 44.9
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 1.3e-47 194.5 148 64.2
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.0e-45 187.2 98 91.8
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 3.8e-44 183.0 137 61.3
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 6.6e-44 182.2 98 83.7
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 6.1e-42 175.6 98 81.6
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 2.6e-40 170.2 88 87.5
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.2e-39 167.2 222 53.2
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 9.2e-38 161.8 124 59.7
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 1.7e-36 157.5 98 74.5
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 3.9e-36 156.4 133 60.9
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 5.6e-35 152.5 98 74.5
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 4.7e-34 149.4 231 48.1
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 3.3e-27 126.7 218 42.2
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.1e-25 120.2 207 45.4
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.3e-20 104.8 248 34.3
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-15 88.2 73 64.4
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-15 88.2 73 64.4
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-15 88.2 73 64.4
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 2.2e-15 87.4 71 59.2
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.1e-14 85.1 194 38.1
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 7.1e-14 82.4 82 56.1
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.0e-12 78.6 202 36.6
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 2.5e-11 73.9 41 78.0
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 8.9e-09 65.5 202 32.7
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.0e-08 64.3 44 63.6
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 2.2e-07 60.8 136 34.6
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 2.9e-07 60.5 95 36.8


User provided reference genes

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