Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g008770.3 Solanum lycopersicum HOM05D006485 ORTHO05D006108 9.1e-94 348.2 436 100.0
Sopen09g003560 Solanum pennellii HOM05D006485 ORTHO05D006108 9.5e-67 258.5 460 83.3
PGSC0003DMG400002731 Solanum tuberosum HOM05D006485 ORTHO05D006108 9.2e-54 215.3 439 75.2
Nitab4.5_0000680g0110 Nicotiana tabacum HOM05D006485 ORTHO05D006108 1.0e-23 115.5 485 64.3
Nitab4.5_0006314g0010 Nicotiana tabacum HOM05D006485 ORTHO05D006108 3.0e-20 104.0 504 62.1
Peaxi162Scf00500g00067 Petunia axillaris HOM05D006485 ORTHO05D006108 1.1e-19 102.1 465 65.8
CAN.G824.55 Capsicum annuum HOM05D006485 ORTHO05D006108 2.1e-18 97.8 110 55.5
CAN.G186.74 Capsicum annuum HOM05D006485 ORTHO05D006108 1.1e-09 68.9 60 56.7
MELO3C009418.2 Cucumis melo HOM05D006485 ORTHO05D006108 6.9e-09 66.2 96 45.8
PGR004G2529 Punica granatum HOM05D006485 ORTHO05D006108 9.0e-09 65.9 105 43.8
Aa31LG5G21840 Aethionema arabicum HOM05D006485 ORTHO05D006108 1.2e-08 65.5 76 48.7
BcaB02g08540 Brassica carinata HOM05D006485 ORTHO05D006108 2.0e-08 64.7 84 45.2
DCAR_020791 Daucus carota HOM05D006485 ORTHO05D006108 2.6e-08 64.3 138 39.1
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 4.5e-08 63.5 80 48.8
Thhalv10010945m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 1.0e-07 62.4 86 44.2
AT2G36640 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 1.3e-07 62.0 78 47.4
Atru.chr8.1691 Acer truncatum HOM05D006485 ORTHO05D006108 2.2e-07 61.2 82 42.7
DCAR_020790 Daucus carota HOM05D006485 ORTHO05D006108 2.2e-07 61.2 114 41.2
Ca_08949_v3 Cicer arietinum L. HOM05D013121 ORTHO05D015407 5.0e-07 60.1 143 42.7
A04p06430 Brassica napus HOM05D006485 ORTHO05D006108 8.5e-07 59.3 82 47.6
C04p39920 Brassica napus HOM05D006485 ORTHO05D006108 8.5e-07 59.3 82 47.6
BraA04t16347Z Brassica rapa HOM05D006485 ORTHO05D006108 8.5e-07 59.3 82 47.6
Carub.0004s1846 Capsella rubella HOM05D006485 ORTHO05D006108 8.5e-07 59.3 79 48.1
SalBow5G2944 Salvia bowleyana HOM05D006485 ORTHO05D006108 8.5e-07 59.3 109 39.4
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 8.5e-07 59.3 94 43.6
ClCG10G019560 Citrullus lanatus HOM05D006485 ORTHO05D006108 1.1e-06 58.9 129 33.3
BcaC02g09194 Brassica carinata HOM05D006485 ORTHO05D006108 1.9e-06 58.2 70 51.4
BolC4t25563H Brassica oleracea HOM05D006485 ORTHO05D006108 1.9e-06 58.2 70 51.4
Carub.0005s1954 Capsella rubella HOM05D006485 ORTHO05D006108 1.9e-06 58.2 87 41.4
PSO063G6051 Papaver somniferum HOM05D006485 ORTHO05D006108 1.9e-06 58.2 105 38.1
Sp5g09280 Schrenkiella parvula HOM05D006485 ORTHO05D006108 1.9e-06 58.2 79 46.8
BcaB06g28951 Brassica carinata HOM05D006485 ORTHO05D006108 3.2e-06 57.4 130 35.4
Cfa016504 Carpinus fangiana HOM05D006485 ORTHO05D006108 3.2e-06 57.4 51 56.9
AL4G32820 Arabidopsis lyrata HOM05D006485 ORTHO05D006108 4.2e-06 57.0 78 44.9
BcaB06g28954 Brassica carinata HOM05D006485 ORTHO05D006108 4.2e-06 57.0 131 35.1
A04p28050 Brassica napus HOM05D006485 ORTHO05D006108 4.2e-06 57.0 137 33.6
C04p65460 Brassica napus HOM05D006485 ORTHO05D006108 4.2e-06 57.0 137 33.6
BolC4t28034H Brassica oleracea HOM05D006485 ORTHO05D006108 4.2e-06 57.0 131 35.1
Haze_19505 Corylus avellana HOM05D006485 ORTHO05D006108 5.5e-06 56.6 51 56.9
CsaV3_3G036640 Cucumis sativus L. HOM05D006485 ORTHO05D006108 5.5e-06 56.6 75 46.7
Potri.015G060600 Populus trichocarpa HOM05D006485 ORTHO05D006108 5.5e-06 56.6 104 39.4
BraA04t18292Z Brassica rapa HOM05D006485 ORTHO05D006108 7.2e-06 56.2 137 33.6
AT3G53040 Arabidopsis thaliana HOM05D006485 ORTHO05D006108 9.4e-06 55.8 78 43.6
CiPaw.10G003000 Carya illinoinensis HOM05D006485 ORTHO05D006108 9.4e-06 55.8 118 39.0
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 9.4e-06 55.8 134 33.6


User provided reference genes

Program Settings