Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 1.6e-261 905.6 479 100.0
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 7.3e-254 880.2 479 97.1
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 5.1e-239 830.9 483 92.1
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 5.4e-188 661.4 482 74.9
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.3e-183 646.0 485 73.2
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 1.6e-147 526.9 479 64.1
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 2.1e-136 490.0 257 97.7
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.3e-93 347.8 504 46.4
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 3.2e-84 316.6 497 47.1
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 6.7e-82 308.9 455 45.7
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 4.5e-78 296.2 489 41.9
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 2.9e-77 293.5 492 42.9
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.9e-76 290.8 460 44.8
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 1.6e-70 271.2 518 38.6
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 2.2e-69 267.3 484 42.1
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.3e-64 251.5 370 44.9
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 2.2e-64 250.8 492 41.7
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 3.7e-64 250.0 504 39.9
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 8.3e-64 248.8 504 40.1
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 7.0e-63 245.7 498 39.8
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 2.9e-61 240.4 460 40.9
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 8.6e-61 238.8 390 45.1
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 1.9e-60 237.7 496 39.1
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 7.3e-60 235.7 309 48.9
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 2.8e-59 233.8 369 45.5
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 4.7e-59 233.0 358 45.8
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 8.0e-59 232.3 374 43.6
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 3.4e-57 226.9 361 44.0
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 4.4e-57 226.5 353 45.3
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 2.2e-56 224.2 376 43.1
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 3.2e-55 220.3 309 47.9
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 9.2e-55 218.8 362 44.8
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 1.6e-54 218.0 334 45.8
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 7.8e-54 215.7 312 45.8
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.0e-53 215.3 268 51.1
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 8.6e-53 212.2 364 42.0
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 5.6e-52 209.5 578 33.0
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 9.5e-52 208.8 399 39.8
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 1.2e-51 208.4 330 45.5
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 1.6e-51 208.0 450 38.2
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 2.1e-51 207.6 281 47.0
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 2.1e-51 207.6 377 41.4
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 4.7e-51 206.5 263 48.7
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.1e-50 203.8 256 50.8
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 2.0e-49 201.1 315 45.1
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 2.9e-48 197.2 353 41.6
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.4e-47 194.9 373 40.8
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-47 194.9 340 40.3
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.9e-47 194.5 306 42.8
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.4e-47 194.1 270 48.1
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 3.2e-47 193.7 373 40.5
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-46 191.0 285 44.2
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 6.6e-45 186.0 315 42.9
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-44 184.9 313 40.6
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-44 184.9 380 36.8
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.9e-44 184.5 316 43.4
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 2.5e-44 184.1 366 38.0
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 2.5e-44 184.1 299 44.1
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 1.2e-43 181.8 372 39.5
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 2.1e-43 181.0 344 39.5
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.1e-42 178.7 308 42.2
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-42 178.7 347 38.0
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 5.2e-42 176.4 377 38.7
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 1.5e-41 174.9 380 39.7
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.5e-41 174.9 393 37.2
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 1.5e-41 174.9 378 39.2
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-41 174.5 280 42.9
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 9.8e-41 172.2 309 41.7
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 9.8e-41 172.2 304 41.4
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 2.2e-40 171.0 330 40.9
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 2.9e-40 170.6 340 37.6
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 3.7e-40 170.2 362 38.4
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 3.2e-39 167.2 364 39.3
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-38 164.9 358 36.0
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 6.0e-38 162.9 329 36.8
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 3.0e-37 160.6 370 35.7
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 3.9e-37 160.2 220 48.2
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 8.6e-37 159.1 359 36.5
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 5.6e-36 156.4 249 44.2
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 9.5e-36 155.6 380 37.6
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 1.2e-35 155.2 297 40.7
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 2.8e-35 154.1 345 36.8
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 6.2e-35 152.9 302 36.4
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 2.6e-33 147.5 243 45.7
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 9.9e-33 145.6 399 33.6
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 2.9e-32 144.1 248 38.3
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.4e-31 141.7 355 36.1
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 2.1e-30 137.9 312 37.2
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 2.8e-27 127.5 239 38.1
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 4.9e-24 116.7 220 40.5
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 4.6e-22 110.2 301 35.2
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 1.7e-21 108.2 94 60.6
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 2.3e-21 107.8 112 57.1
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 6.0e-14 83.2 220 33.2
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 7.4e-12 76.3 89 46.1
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 2.8e-11 74.3 86 47.7
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 4.8e-11 73.6 57 61.4
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.8e-11 73.6 57 61.4
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.8e-11 73.6 57 61.4
TAR625G1494 Trochodendron aralioides HOM05D005497 ORTHO05D006733 1.8e-10 71.6 237 29.1
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 3.1e-10 70.9 117 45.3
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-09 68.2 69 56.5
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 1.3e-08 65.5 270 27.4
FvH4_2g41090 Fragaria vesca HOM05D005497 ORTHO05D006733 4.9e-08 63.5 297 26.3
FAN15G1151 Fragaria x ananassa HOM05D005497 ORTHO05D006733 6.4e-08 63.2 248 25.8
SEGI_31561 Sequoiadendron giganteum HOM05D007360 ORTHO05D008235 2.4e-07 61.2 256 27.7
Hma1.2p1_1284F.1_g272900 Hydrangea macrophylla HOM05D005497 ORTHO05D006733 9.3e-07 59.3 254 26.4
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 9.3e-07 59.3 107 39.3
MBI15_g07765_MAGBIO Magnolia biondii HOM05D005497 ORTHO05D006733 1.6e-06 58.5 250 28.4
SMO116G0351 Selaginella moellendorffii HOM05D005497 ORTHO05D006733 2.7e-06 57.8 158 32.9
Nn2g12349 Nelumbo nucifera HOM05D005497 ORTHO05D006733 4.6e-06 57.0 248 27.0
SMO367G0340 Selaginella moellendorffii HOM05D018912 ORTHO05D004121 7.9e-06 56.2 225 25.3


User provided reference genes

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