Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 2.9e-62 241.9 138 100.0
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.9e-62 241.9 138 99.3
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 9.4e-53 210.3 141 79.4
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 3.6e-52 208.4 140 77.1
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 2.2e-49 199.1 140 73.6
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.4e-32 143.3 141 56.0
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 2.7e-31 139.0 139 56.1
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 2.3e-30 136.0 149 54.4
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 2.5e-29 132.5 143 51.7
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 2.5e-29 132.5 144 50.0
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 4.2e-29 131.7 152 50.7
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 7.2e-29 131.0 124 58.1
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 2.1e-28 129.4 142 54.9
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 8.0e-28 127.5 152 49.3
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 8.0e-28 127.5 150 50.7
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 1.0e-27 127.1 117 60.7
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.0e-27 127.1 150 50.0
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.8e-27 126.3 83 77.1
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 1.8e-27 126.3 112 59.8
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 2.3e-27 125.9 116 59.5
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 2.3e-27 125.9 111 59.5
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 3.0e-27 125.6 155 51.6
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 4.0e-27 125.2 144 52.1
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 4.0e-27 125.2 137 53.3
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 4.0e-27 125.2 126 57.9
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 6.8e-27 124.4 115 58.3
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 6.8e-27 124.4 141 54.6
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 8.9e-27 124.0 144 52.8
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 1.2e-26 123.6 83 72.3
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 1.5e-26 123.2 139 51.1
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.5e-26 123.2 79 75.9
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.5e-26 123.2 145 49.7
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.5e-26 123.2 144 50.0
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 2.0e-26 122.9 111 58.6
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 2.0e-26 122.9 83 73.5
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 3.4e-26 122.1 83 74.7
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 3.4e-26 122.1 128 53.1
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 4.4e-26 121.7 143 53.8
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 9.8e-26 120.6 119 54.6
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 9.8e-26 120.6 123 55.3
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 2.9e-25 119.0 83 69.9
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 2.9e-25 119.0 142 54.2
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 2.9e-25 119.0 110 58.2
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 4.9e-25 118.2 142 50.0
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 4.9e-25 118.2 83 71.1
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 4.9e-25 118.2 109 59.6
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 6.3e-25 117.9 78 75.6
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 8.3e-25 117.5 139 47.5
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 8.3e-25 117.5 175 43.4
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 8.3e-25 117.5 153 46.4
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.1e-24 117.1 83 72.3
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 1.1e-24 117.1 83 72.3
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 1.1e-24 117.1 83 72.3
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.1e-24 117.1 83 72.3
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.1e-24 117.1 83 72.3
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 1.1e-24 117.1 83 72.3
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.1e-24 117.1 83 72.3
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.1e-24 117.1 109 58.7
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.8e-24 116.3 110 56.4
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 1.8e-24 116.3 119 55.5
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 2.4e-24 115.9 127 52.0
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 3.2e-24 115.5 79 73.4
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 3.2e-24 115.5 147 52.4
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.2e-24 115.5 112 56.2
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 4.1e-24 115.2 83 68.7
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 4.1e-24 115.2 78 69.2
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 4.1e-24 115.2 78 69.2
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 7.0e-24 114.4 83 71.1
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 7.0e-24 114.4 83 66.3
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 9.2e-24 114.0 83 69.9
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.2e-23 113.6 83 73.5
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 1.2e-23 113.6 83 67.5
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 1.6e-23 113.2 78 67.9
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 3.5e-23 112.1 79 67.1
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 3.5e-23 112.1 83 68.7
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 3.5e-23 112.1 83 69.9
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 1.3e-22 110.2 83 61.4
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 8.6e-22 107.5 108 50.0
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.5e-21 106.7 77 68.8
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 1.5e-21 106.7 77 68.8
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 4.3e-21 105.1 79 62.0
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 4.3e-21 105.1 79 62.0
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 5.6e-21 104.8 83 68.7
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 1.6e-20 103.2 136 47.8
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 4.7e-20 101.7 139 46.8
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.0e-19 100.5 79 59.5
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.4e-19 100.1 79 64.6
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 5.2e-19 98.2 83 63.9
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 5.8e-18 94.7 67 64.2
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 7.5e-18 94.4 59 72.9
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.2e-17 92.8 59 74.6
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 2.9e-17 92.4 56 75.0
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 1.1e-16 90.5 64 62.5
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 5.0e-14 81.6 78 48.7
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 8.6e-14 80.9 108 46.3
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 7.3e-13 77.8 83 56.6
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 1.9e-08 63.2 80 45.0
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 1.2e-07 60.5 48 56.2
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 4.6e-07 58.5 40 62.5
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 6.0e-07 58.2 82 37.8


User provided reference genes

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