Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 0.0e+00 1333.5 858 100.0
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 0.0e+00 1314.3 858 98.8
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 0.0e+00 1076.6 864 84.1
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 7.8e-307 1057.0 863 77.6
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 1.6e-296 1022.7 766 89.3
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 2.9e-293 1011.9 869 78.5
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 6.4e-200 701.8 860 59.7
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 2.1e-195 686.8 855 60.7
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 4.0e-194 682.6 805 61.4
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 6.4e-192 675.2 862 61.7
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 1.4e-191 674.1 862 58.9
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 1.6e-190 670.6 854 58.5
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 2.3e-189 666.8 866 58.5
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 4.3e-188 662.5 864 58.2
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 4.8e-187 659.1 798 64.4
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 5.8e-185 652.1 866 60.3
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 2.2e-184 650.2 824 61.5
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 3.2e-183 646.4 863 56.8
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 3.2e-183 646.4 855 57.4
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 4.2e-183 646.0 872 57.2
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 2.1e-182 643.7 873 57.3
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 3.5e-182 642.9 872 50.9
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 4.5e-177 625.9 877 57.6
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.7e-176 624.0 858 55.9
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.2e-176 623.6 860 55.9
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 2.2e-176 623.6 870 60.2
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 4.9e-176 622.5 857 56.7
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 1.4e-175 620.9 868 56.6
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 2.1e-174 617.1 824 60.6
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 3.5e-174 616.3 791 58.5
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 3.5e-174 616.3 854 55.6
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 1.8e-173 614.0 857 55.1
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 6.7e-173 612.1 865 55.0
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 1.9e-172 610.5 849 54.8
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 2.5e-172 610.1 833 56.3
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 8.2e-171 605.1 860 55.0
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 3.8e-168 596.3 837 51.4
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 3.2e-167 593.2 781 50.7
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 4.2e-167 592.8 853 54.0
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 5.5e-167 592.4 807 56.5
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 1.2e-166 591.3 804 55.5
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 1.6e-166 590.9 862 53.4
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 2.1e-166 590.5 869 55.2
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 1.3e-165 587.8 825 55.3
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 1.5e-164 584.3 851 54.9
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 1.5e-164 584.3 761 60.4
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 1.9e-164 583.9 863 54.1
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 1.9e-164 583.9 863 54.1
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 2.8e-163 580.1 864 53.0
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 2.8e-163 580.1 864 53.0
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 6.9e-162 575.5 859 53.6
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 3.4e-161 573.2 876 52.2
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 1.7e-160 570.9 868 52.8
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 2.9e-160 570.1 753 55.9
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 5.0e-160 569.3 875 46.3
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 1.1e-159 568.2 858 54.5
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 4.2e-159 566.2 697 61.0
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 1.6e-158 564.3 869 52.4
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 2.1e-158 563.9 869 52.7
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 1.0e-157 561.6 809 54.6
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 8.7e-157 558.5 910 45.5
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 5.7e-156 555.8 856 55.0
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 3.7e-155 553.1 825 53.6
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 4.8e-155 552.7 823 48.4
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 1.1e-154 551.6 836 54.7
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 1.0e-152 545.0 821 55.3
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 8.5e-152 542.0 855 51.1
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 7.2e-151 538.9 755 59.5
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 1.8e-149 534.3 814 53.9
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 1.1e-148 531.6 738 54.3
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 1.5e-148 531.2 761 55.1
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 7.4e-148 528.9 826 44.9
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 9.7e-148 528.5 882 44.9
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 2.2e-147 527.3 740 53.5
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 2.4e-146 523.9 745 54.4
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 3.1e-146 523.5 783 45.2
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 9.1e-146 521.9 783 45.1
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 2.6e-145 520.4 854 49.8
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 7.7e-145 518.8 746 54.3
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 1.0e-144 518.5 755 54.2
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 4.2e-143 513.1 885 50.8
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 5.5e-143 512.7 900 50.9
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 4.7e-134 483.0 857 51.1
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.9e-127 461.1 781 37.3
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 1.2e-118 431.8 767 49.7
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 3.0e-117 427.2 589 61.0
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 8.3e-115 419.1 794 41.4
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 5.4e-106 389.8 582 55.3
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 8.6e-104 382.5 804 44.4
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 1.9e-98 364.8 402 63.7
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 2.4e-98 364.4 530 60.8
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 2.2e-75 288.1 533 54.2
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.9e-74 285.0 799 41.3
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 2.4e-74 284.6 409 62.8
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 3.5e-73 280.8 660 32.0
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 9.3e-66 256.1 728 43.7
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 4.0e-61 240.7 781 39.1
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 7.9e-57 226.5 271 50.2
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 1.2e-52 212.6 223 52.9
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 1.9e-47 195.3 225 47.6
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 2.6e-44 184.9 513 34.5
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 1.0e-40 172.9 186 53.2
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 2.8e-38 164.9 315 47.3
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 1.4e-26 125.9 132 51.5
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 9.1e-21 106.7 184 35.3
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 1.2e-20 106.3 105 75.2
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 1.0e-16 93.2 74 56.8
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 3.2e-10 71.6 175 54.9


User provided reference genes

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