Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 8.0e-83 310.8 216 100.0
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 1.2e-70 270.4 201 94.5
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 2.0e-62 243.0 203 86.2
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 6.4e-32 141.7 198 63.6
Peaxi162Scf00597g00826 Petunia axillaris HOM05D007476 ORTHO05D006998 2.4e-31 139.8 205 62.9
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 5.6e-28 128.6 189 59.8
Nitab4.5_0000643g0260 Nicotiana tabacum HOM05D007476 ORTHO05D006998 4.8e-27 125.6 202 64.4
PGSC0003DMG400017597 Solanum tuberosum HOM05D000217 ORTHO05D000121 1.4e-26 124.0 158 66.5
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 1.5e-25 120.6 198 58.1
Nitab4.5_0002073g0060 Nicotiana tabacum HOM05D000217 ORTHO05D000121 4.2e-15 85.9 181 56.4
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 7.1e-15 85.1 207 49.3
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 7.9e-14 81.6 130 66.2
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 1.1e-12 77.8 125 68.0
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 1.3e-11 74.3 197 51.3
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 1.6e-11 73.9 201 37.8
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 2.8e-11 73.2 194 45.9
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 4.8e-11 72.4 194 52.1
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 4.8e-11 72.4 199 44.2
Nitab4.5_0008580g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 6.3e-11 72.0 158 61.4
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 1.8e-10 70.5 195 44.6
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 2.4e-10 70.1 205 40.5
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 5.3e-10 68.9 159 45.9
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 9.0e-10 68.2 199 42.2
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 9.0e-10 68.2 201 42.8
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 7.6e-09 65.1 167 44.3
Glyma.19G176700 Glycine max HOM05D007476 ORTHO05D006998 1.0e-08 64.7 133 60.2
Lalb_Chr20g0113001 Lupinus albus HOM05D007476 ORTHO05D006998 1.0e-08 64.7 204 47.1
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 1.7e-08 63.9 222 44.6
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 1.7e-08 63.9 197 46.2
Atru.chr8.2515 Acer truncatum HOM05D007476 ORTHO05D006998 2.2e-08 63.5 155 50.3
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 2.9e-08 63.2 82 64.6
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 8.5e-08 61.6 194 45.4
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 1.1e-07 61.2 239 37.2
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 1.4e-07 60.8 162 49.4
Oeu026075.1 Olea europaea HOM05D007476 ORTHO05D006998 1.9e-07 60.5 206 43.7
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 1.9e-07 60.5 153 44.4
arahy.Tifrunner.gnm1.ann1.KRM1EW Arachis hypogaea HOM05D007476 ORTHO05D006998 3.2e-07 59.7 175 47.4
CSS0046323 Camellia sinensis var. sinensis HOM05D007476 ORTHO05D006998 3.2e-07 59.7 205 49.8
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 5.5e-07 58.9 174 44.3
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 7.2e-07 58.5 212 40.1
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 7.2e-07 58.5 134 45.5
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 7.2e-07 58.5 149 48.3
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 2.1e-06 57.0 136 44.1
Migut.L01648 Erythranthe guttata HOM05D020465 ORTHO05D006998 2.7e-06 56.6 145 55.9
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 2.7e-06 56.6 47 63.8
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.6e-06 56.2 217 35.5
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 4.6e-06 55.8 215 45.1
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 4.6e-06 55.8 199 40.2
CANSAT80G1705 Cannabis sativa HOM05D007476 ORTHO05D006998 6.1e-06 55.5 207 32.9
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 6.1e-06 55.5 175 36.0
CsaV3_3G035320 Cucumis sativus L. HOM05D029433 ORTHO05D028973 7.9e-06 55.1 128 40.6


User provided reference genes

Program Settings