Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 4.4e-106 387.9 185 100.0
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 5.4e-88 327.8 185 82.7
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.4e-83 312.4 185 80.0
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 2.4e-80 302.4 195 79.0
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 1.5e-74 283.1 151 85.4
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.1e-59 233.8 184 60.3
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 3.1e-59 232.3 134 73.1
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.0e-58 229.6 180 60.6
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.3e-57 226.9 184 57.1
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.7e-57 226.5 129 72.9
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.9e-56 223.0 179 58.1
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 2.5e-56 222.6 179 65.4
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 9.3e-56 220.7 129 72.9
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.6e-55 219.9 186 58.1
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.1e-55 219.5 186 58.1
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 2.7e-55 219.2 184 58.7
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 1.0e-54 217.2 176 58.0
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.3e-54 216.1 186 57.0
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 3.9e-54 215.3 166 59.6
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 8.7e-54 214.2 180 56.7
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.1e-53 213.8 131 67.9
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 1.1e-53 213.8 186 55.9
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 1.1e-53 213.8 184 56.5
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 1.1e-53 213.8 176 58.0
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.1e-53 213.8 174 57.5
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.5e-53 213.4 127 70.1
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 3.3e-53 212.2 182 56.0
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 9.6e-53 210.7 127 70.1
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 1.3e-52 210.3 186 55.4
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.3e-52 210.3 126 70.6
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 1.6e-52 209.9 123 71.5
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 2.8e-52 209.1 184 53.3
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.8e-52 209.1 137 67.9
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 3.7e-52 208.8 137 67.9
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 3.7e-52 208.8 179 56.4
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 4.8e-52 208.4 184 50.5
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 4.8e-52 208.4 126 69.0
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 6.3e-52 208.0 174 58.0
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 8.2e-52 207.6 184 50.0
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 1.8e-51 206.5 184 56.0
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 3.1e-51 205.7 176 58.0
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 4.1e-51 205.3 129 66.7
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 6.9e-51 204.5 120 72.5
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 6.9e-51 204.5 185 53.5
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 2.6e-50 202.6 131 68.7
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 2.6e-50 202.6 185 53.0
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 2.6e-50 202.6 163 55.2
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.6e-50 202.6 184 49.5
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 3.4e-50 202.2 179 54.2
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 5.9e-50 201.4 130 66.9
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.0e-49 200.7 184 52.2
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.0e-49 200.7 125 66.4
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.3e-49 200.3 123 69.1
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 2.2e-49 199.5 131 64.9
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.9e-49 199.1 178 51.7
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 6.5e-49 198.0 130 63.8
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 6.5e-49 198.0 126 69.0
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 6.5e-49 198.0 176 56.2
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 8.5e-49 197.6 149 57.7
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 8.5e-49 197.6 184 52.2
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.1e-48 197.2 126 65.9
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 1.4e-48 196.8 167 53.9
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.4e-48 196.8 131 64.1
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.4e-48 196.8 131 64.1
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.9e-48 196.4 170 54.1
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 2.5e-48 196.1 149 56.4
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 3.2e-48 195.7 164 54.9
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 5.5e-48 194.9 118 65.3
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 9.3e-48 194.1 182 50.5
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-47 193.7 180 50.0
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.2e-47 193.7 131 62.6
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 1.6e-47 193.4 189 52.4
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.7e-47 192.6 166 53.0
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 6.1e-47 191.4 185 49.2
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 5.1e-46 188.3 165 52.7
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 5.1e-46 188.3 154 59.7
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 2.5e-45 186.0 156 55.8
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 3.3e-45 185.7 110 69.1
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 3.7e-44 182.2 123 61.0
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 2.4e-43 179.5 176 48.9
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 5.3e-43 178.3 171 48.5
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 7.7e-42 174.5 166 52.4
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 6.5e-41 171.4 127 58.3
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 8.5e-41 171.0 104 67.3
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 3.2e-40 169.1 114 59.6
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 4.2e-40 168.7 166 51.2
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 4.2e-40 168.7 157 50.3
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 3.6e-39 165.6 178 47.8
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 6.7e-38 161.4 116 56.9
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 1.1e-37 160.6 133 52.6
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 2.6e-37 159.5 178 46.6
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 2.8e-36 156.0 161 45.3
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.8e-35 153.3 138 53.6
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 1.3e-33 147.1 88 70.5
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.3e-27 125.2 86 61.6
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 2.6e-26 122.9 73 64.4
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.8e-20 102.8 173 34.1
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 2.9e-17 92.8 100 52.0
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 5.5e-16 88.6 56 69.6
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.1e-11 74.3 97 40.2
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 4.1e-11 72.4 48 62.5


User provided reference genes

Program Settings