Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 4.0e-125 451.4 225 100.0
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 6.3e-123 444.1 225 97.8
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 8.5e-120 433.7 224 95.1
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 2.4e-90 335.9 223 74.9
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.2e-89 333.6 226 70.8
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.0e-89 332.8 225 71.6
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 4.6e-89 331.6 227 72.2
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 1.7e-59 233.4 228 52.6
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.4e-58 230.3 227 52.0
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.4e-58 230.3 227 52.0
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 4.2e-58 228.8 225 53.3
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 2.7e-57 226.1 227 50.7
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 1.7e-56 223.4 218 50.0
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 2.3e-56 223.0 214 53.3
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 7.4e-55 218.0 228 49.6
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 3.6e-54 215.7 230 50.9
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.1e-53 214.2 226 48.2
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.8e-53 213.4 196 52.0
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 2.4e-53 213.0 225 48.0
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 3.1e-53 212.6 198 52.0
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 5.3e-53 211.8 196 53.1
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 2.6e-52 209.5 226 49.1
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 7.6e-52 208.0 235 44.7
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 4.9e-51 205.3 223 48.4
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 3.2e-50 202.6 232 47.0
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 3.5e-49 199.1 228 46.1
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.0e-48 197.6 196 50.0
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 1.3e-48 197.2 256 39.8
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 6.7e-48 194.9 232 48.3
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 1.1e-47 194.1 238 42.0
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.9e-47 193.4 235 43.4
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 9.6e-47 191.0 232 44.4
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 1.6e-46 190.3 231 43.7
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 4.8e-46 188.7 228 44.3
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 1.4e-45 187.2 239 41.8
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 4.0e-45 185.7 233 39.9
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 5.3e-45 185.3 197 47.7
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 4.5e-44 182.2 198 44.9
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 1.7e-43 180.3 195 46.7
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.7e-43 180.3 217 42.4
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 3.2e-42 176.0 225 40.4
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 9.3e-42 174.5 226 38.9
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 1.6e-41 173.7 225 39.6
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 2.1e-41 173.3 232 41.4
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 2.1e-41 173.3 203 44.8
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 2.1e-41 173.3 227 39.6
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 3.5e-41 172.6 197 43.7
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 3.5e-41 172.6 191 42.9
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 4.6e-41 172.2 198 41.4
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 4.6e-41 172.2 200 46.0
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 4.6e-41 172.2 200 46.0
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 7.9e-41 171.4 227 38.3
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.3e-40 170.6 186 45.7
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 1.3e-40 170.6 200 45.5
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 1.3e-40 170.6 184 46.2
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.3e-40 170.6 220 42.3
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 1.8e-40 170.2 230 41.7
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 1.8e-40 170.2 174 49.4
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 3.0e-40 169.5 218 37.2
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.1e-39 167.5 197 42.6
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 1.1e-39 167.5 242 37.6
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.9e-39 166.8 238 37.4
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.9e-39 166.8 242 36.8
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 2.5e-39 166.4 197 42.1
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 7.4e-39 164.9 242 37.2
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 9.6e-39 164.5 231 38.1
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.6e-38 163.7 242 36.0
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 3.7e-38 162.5 187 43.9
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 6.3e-38 161.8 225 39.6
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 1.4e-37 160.6 183 43.7
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 2.0e-36 156.8 321 34.0
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 3.4e-36 156.0 217 38.2
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.7e-35 153.7 195 39.5
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 1.7e-35 153.7 256 37.9
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 6.5e-35 151.8 237 39.7
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 6.5e-35 151.8 188 41.5
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 8.4e-35 151.4 177 41.2
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 8.4e-35 151.4 181 42.5
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.4e-34 150.6 175 41.7
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 1.9e-34 150.2 191 40.3
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 3.2e-34 149.4 171 42.1
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 4.2e-34 149.1 177 40.7
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 5.5e-34 148.7 241 36.1
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 7.2e-34 148.3 240 35.8
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 1.2e-33 147.5 171 41.5
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 3.5e-33 146.0 177 40.1
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 7.9e-33 144.8 240 36.2
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 1.1e-31 141.0 232 40.1
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 8.2e-30 134.8 195 41.5
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 9.4e-26 121.3 222 32.0
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.2e-25 120.9 148 43.9
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.8e-24 117.1 125 44.0
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 5.1e-24 115.5 82 62.2
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 4.3e-23 112.5 137 40.9
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 2.4e-21 106.7 229 32.3
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 2.2e-19 100.1 112 42.9
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 3.6e-17 92.8 184 37.5
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 8.8e-16 88.2 151 33.1
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 9.7e-15 84.7 81 51.9
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 2.2e-14 83.6 90 42.2
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 5.3e-13 79.0 91 38.5
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 8.5e-11 71.6 64 56.2
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 1.1e-10 71.2 200 26.5
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 4.2e-10 69.3 185 27.0
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 7.2e-10 68.6 177 25.4
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 1.0e-08 64.7 70 44.3
Oeu008469.1 Olea europaea HOM05D007171 ORTHO05D008946 6.3e-06 55.5 219 26.9


User provided reference genes

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