Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 1.8e-204 715.7 356 100.0
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 6.6e-151 537.7 328 84.5
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.8e-122 442.2 351 65.8
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 7.4e-110 401.4 367 61.3
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.4e-87 327.4 354 52.3
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.3e-87 326.6 347 55.3
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 7.5e-78 295.0 368 51.4
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 9.8e-78 294.7 396 46.5
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.2e-75 287.7 451 43.2
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 2.5e-73 280.0 360 45.0
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 1.8e-71 273.9 348 46.3
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.7e-70 268.9 324 46.3
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 1.7e-69 267.3 360 44.7
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.6e-64 250.8 257 53.3
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 1.4e-55 221.1 291 45.7
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 7.1e-52 208.8 217 53.0
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 6.0e-51 205.7 304 42.4
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.5e-46 191.0 345 36.2
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 3.2e-44 183.3 257 43.2
Sopen09g003390 Solanum pennellii HOM05D007354 ORTHO05D006294 3.2e-44 183.3 208 47.6
Nitab4.5_0004281g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.3e-42 177.9 267 41.6
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.1e-40 170.6 179 52.0
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.1e-39 166.8 219 42.9
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.4e-38 162.9 329 31.6
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 2.9e-37 160.2 123 62.6
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 3.8e-37 159.8 125 63.2
PGSC0003DMG400046284 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.9e-37 159.5 155 53.5
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 8.4e-37 158.7 125 63.2
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 1.9e-36 157.5 126 59.5
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.2e-36 156.8 329 31.3
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 1.2e-35 154.8 342 31.6
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.6e-35 154.5 327 34.9
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 3.5e-35 153.3 345 32.5
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 6.0e-35 152.5 324 35.5
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 6.0e-35 152.5 357 33.9
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 7.8e-35 152.1 324 34.9
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 8.7e-34 148.7 351 32.2
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 5.6e-33 146.0 337 30.6
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 7.3e-33 145.6 359 30.1
Peaxi162Scf01233g00008 Petunia axillaris HOM05D007354 ORTHO05D006294 4.0e-31 139.8 324 34.0
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 4.0e-31 139.8 352 28.4
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.3e-31 139.4 329 31.3
Nitab4.5_0011155g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 6.9e-31 139.0 191 42.4
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 2.2e-29 134.0 330 30.0
PGSC0003DMG400034995 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-28 131.7 121 56.2
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 7.1e-28 129.0 277 32.5
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 9.3e-28 128.6 317 28.7
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 1.6e-27 127.9 359 28.1
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.7e-27 127.1 328 27.7
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 3.5e-27 126.7 362 28.2
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 2.3e-26 124.0 331 28.7
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 2.3e-26 124.0 328 31.7
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.3e-25 120.2 332 25.9
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 7.4e-25 119.0 341 26.7
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 1.1e-23 115.2 259 32.0
PGSC0003DMG400046725 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.4e-23 114.8 88 61.4
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 4.0e-23 113.2 342 28.7
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 4.0e-23 113.2 319 29.2
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 6.9e-23 112.5 330 29.7
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 6.9e-23 112.5 326 29.8
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.6e-22 110.5 345 25.8
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.6e-22 110.5 355 26.8
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 1.7e-21 107.8 309 27.8
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 7.1e-20 102.4 324 26.2
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 7.9e-19 99.0 294 31.3
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 1.3e-18 98.2 74 60.8
Hma1.2p1_2464F.1_g322610 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 1.8e-18 97.8 338 28.1
Nitab4.5_0003906g0070 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.8e-18 97.8 282 29.4
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.9e-18 96.7 321 26.5
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 1.1e-17 95.1 344 25.9
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-17 94.7 352 24.1
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.9e-17 94.4 369 27.6
Peaxi162Scf00123g00126 Petunia axillaris HOM05D007354 ORTHO05D006294 1.9e-17 94.4 169 39.1
Peaxi162Scf00017g00044 Petunia axillaris HOM05D007354 ORTHO05D006294 5.6e-17 92.8 174 39.1
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 7.4e-17 92.4 301 25.2
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.1e-16 90.9 380 25.3
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 4.0e-15 86.7 328 25.0
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.0e-15 86.7 291 27.8
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 2.0e-14 84.3 274 29.2
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 3.4e-14 83.6 359 24.8
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-13 81.6 367 24.5
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 1.3e-13 81.6 363 26.2
EL10Ac4g07793 Beta vulgaris HOM05D003035 ORTHO05D000440 3.8e-13 80.1 379 23.2
EL10Ac4g07794 Beta vulgaris HOM05D003035 ORTHO05D000440 8.4e-13 79.0 367 23.7
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 1.4e-12 78.2 365 25.5
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 1.9e-12 77.8 347 23.9
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 3.2e-12 77.0 255 28.6
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 7.1e-12 75.9 114 33.3
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.6e-11 74.7 347 23.6
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 2.1e-11 74.3 337 22.0
MBI19_g39771_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.1e-11 74.3 327 23.5
PSO478G2495 Papaver somniferum HOM05D003035 ORTHO05D000440 2.1e-11 74.3 390 24.6
PSO732G0047 Papaver somniferum HOM05D003035 ORTHO05D000440 2.7e-11 73.9 364 24.5
Peaxi162Scf00255g00327 Petunia axillaris HOM05D007354 ORTHO05D006294 2.7e-11 73.9 230 30.9
COL.COLO4_22246 Corchorus olitorius HOM05D007354 ORTHO05D006294 3.5e-11 73.6 154 35.7
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 4.6e-11 73.2 346 22.8
Nitab4.5_0001173g0080 Nicotiana tabacum HOM05D007354 ORTHO05D006294 6.0e-11 72.8 189 31.2
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 1.0e-10 72.0 98 35.7
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 1.3e-10 71.6 98 35.7
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 3.0e-10 70.5 332 22.9
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 8.7e-10 68.9 89 38.2
Nitab4.5_0024035g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.1e-09 68.6 105 37.1
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 1.3e-08 65.1 98 33.7
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 1.3e-08 65.1 331 23.9
AUR62034240 Chenopodium quinoa HOM05D003035 ORTHO05D009623 1.6e-08 64.7 103 36.9
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 1.6e-08 64.7 356 24.2
PSO675G7307 Papaver somniferum HOM05D003035 ORTHO05D000440 6.3e-08 62.8 384 24.5
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 6.3e-08 62.8 99 31.3
PSO801G0380 Papaver somniferum HOM05D003035 ORTHO05D006294 8.2e-08 62.4 135 30.4
Migut.L00830 Erythranthe guttata HOM05D007354 ORTHO05D006294 1.4e-07 61.6 333 23.4
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 4.1e-07 60.1 347 23.3
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 6.9e-07 59.3 349 22.1
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 1.5e-06 58.2 122 27.9
Nitab4.5_0026971g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.5e-06 58.2 83 37.3
ECA248G2932 Erigeron canadensis HOM05D008265 ORTHO05D000440 2.0e-06 57.8 286 23.4
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 2.0e-06 57.8 336 21.1
EL10Ac4g07861 Beta vulgaris HOM05D003035 ORTHO05D000440 7.6e-06 55.8 413 22.3
FvH4_3g27200 Fragaria vesca HOM05D008995 ORTHO05D000074 7.6e-06 55.8 299 21.4
PSO478G3996 Papaver somniferum HOM05D003035 ORTHO05D006294 1.0e-05 55.5 408 21.6
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.0e-05 55.5 348 22.4


User provided reference genes

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