Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g005020.1 Solanum lycopersicum HOM05D007653 ORTHO05D009670 2.1e-143 512.3 251 100.0
PGSC0003DMG400026639 Solanum tuberosum HOM05D007653 ORTHO05D009670 4.3e-112 408.3 275 79.3
Sopen09g001030 Solanum pennellii HOM05D007653 ORTHO05D009670 1.2e-101 373.6 188 95.2
CAN.G588.49 Capsicum annuum HOM05D007653 ORTHO05D009670 8.4e-92 340.9 274 73.7
Nitab4.5_0009553g0030 Nicotiana tabacum HOM05D007653 ORTHO05D009670 5.0e-60 235.3 252 58.7
Peaxi162Scf01132g00319 Petunia axillaris HOM05D007653 ORTHO05D009670 1.5e-48 197.2 245 55.1
Oeu057628.1 Olea europaea HOM05D007653 ORTHO05D009670 2.2e-28 130.2 240 37.1
DCAR_028874 Daucus carota HOM05D007653 ORTHO05D009670 1.1e-27 127.9 222 42.8
Actinidia20753 Actinidia chinensis HOM05D007653 ORTHO05D009670 2.3e-25 120.2 246 36.2
Dinv08443 Davidia involucrata HOM05D007653 ORTHO05D009670 5.2e-25 119.0 252 37.3
QL07p034260 Quercus lobata HOM05D007653 ORTHO05D009670 1.3e-23 114.4 269 34.9
Rhsim04G0175600 Rhododendron simsii HOM05D007653 ORTHO05D009670 1.3e-23 114.4 259 35.9
Medtr7g069710 Medicago truncatula HOM05D007653 ORTHO05D009670 2.2e-23 113.6 238 37.0
TPR.G21326 Trifolium pratense HOM05D007653 ORTHO05D009670 2.2e-23 113.6 258 34.1
Thecc.05G009700 Theobroma cacao HOM05D007653 ORTHO05D009670 2.8e-23 113.2 271 34.3
Manes.09G109500 Manihot esculenta HOM05D007653 ORTHO05D009670 3.7e-23 112.8 242 35.1
MD04G1163000 Malus domestica HOM05D007653 ORTHO05D009670 1.1e-22 111.3 251 33.5
Prupe.6G282500 Prunus persica HOM05D007653 ORTHO05D009670 2.4e-22 110.2 257 32.7
ECA247G1536 Erigeron canadensis HOM05D007653 ORTHO05D009670 1.6e-21 107.5 237 37.1
Gohir.A01G229000 Gossypium hirsutum HOM05D007653 ORTHO05D009670 2.0e-21 107.1 254 33.9
TAR369G0435 Trochodendron aralioides HOM05D007653 ORTHO05D009670 7.7e-21 105.1 254 34.6
Gorai.002G265600 Gossypium raimondii HOM05D007653 ORTHO05D009670 1.0e-20 104.8 254 33.9
Phvul.010G060900 Phaseolus vulgaris HOM05D007653 ORTHO05D009670 1.0e-20 104.8 266 35.7
Glyma.03G051200 Glycine max HOM05D007653 ORTHO05D009670 1.3e-20 104.4 260 33.5
TWI74G0740 Tripterygium wilfordii HOM05D007653 ORTHO05D009670 1.3e-20 104.4 247 35.2
Atru.chr8.2298 Acer truncatum HOM05D007653 ORTHO05D009670 2.9e-20 103.2 298 32.9
Gohir.D01G218900 Gossypium hirsutum HOM05D007653 ORTHO05D009670 2.9e-20 103.2 254 34.6
Cfa017149 Carpinus fangiana HOM05D007653 ORTHO05D009670 1.5e-19 100.9 283 32.9
Lalb_Chr12g0207101 Lupinus albus HOM05D007653 ORTHO05D009670 1.5e-19 100.9 264 32.6
Ca_07676_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 2.5e-19 100.1 274 33.2
FAN05G3332 Fragaria x ananassa HOM05D007653 ORTHO05D009670 5.6e-19 99.0 291 33.7
VMungo0331G0216 Vigna mungo HOM05D007653 ORTHO05D009670 7.3e-19 98.6 252 36.5
Glyma.07G154000 Glycine max HOM05D007653 ORTHO05D009670 9.5e-19 98.2 267 32.6
Sed0001003 Sechium edule HOM05D007653 ORTHO05D009670 1.2e-18 97.8 256 34.4
Actinidia32531 Actinidia chinensis HOM05D007653 ORTHO05D009670 2.8e-18 96.7 241 33.2
Duzib093G1250 Durio zibethinus HOM05D007653 ORTHO05D009670 2.8e-18 96.7 268 33.6
ClCG04G006820 Citrullus lanatus HOM05D007653 ORTHO05D009670 3.6e-18 96.3 243 36.2
CiPaw.10G159500 Carya illinoinensis HOM05D007653 ORTHO05D009670 3.0e-17 93.2 267 31.1
Lj3g0004323 Lotus japonicus HOM05D007653 ORTHO05D009670 3.0e-17 93.2 258 31.0
MELO3C026011.2 Cucumis melo HOM05D007653 ORTHO05D009670 6.8e-17 92.0 253 34.4
FAN14G3858 Fragaria x ananassa HOM05D001497 ORTHO05D001619 6.8e-17 92.0 276 31.9
Glyma.01G124000 Glycine max HOM05D007653 ORTHO05D009670 8.9e-17 91.7 256 31.6
arahy.Tifrunner.gnm1.ann1.4LI2NJ Arachis hypogaea HOM05D007653 ORTHO05D009670 2.0e-16 90.5 261 31.0
Lsat_1_v5_gn_9_37441 Lactuca sativa HOM05D007653 ORTHO05D009670 2.0e-16 90.5 246 35.4
Cc06_g00860 Coffea canephora HOM05D007653 ORTHO05D009670 2.6e-16 90.1 302 28.8
Migut.L02038 Erythranthe guttata HOM05D007653 ORTHO05D009670 2.6e-16 90.1 245 32.7
Potri.016G123700 Populus trichocarpa HOM05D007653 ORTHO05D009670 2.6e-16 90.1 286 30.4
Sc07g0006490 Simmondsia chinensis HOM05D007653 ORTHO05D009670 3.4e-16 89.7 272 31.6
Ciclev10012426m.g Citrus clementina HOM05D007653 ORTHO05D009670 7.5e-16 88.6 270 31.1
CsaV3_4G026460 Cucumis sativus L. HOM05D007653 ORTHO05D009670 7.5e-16 88.6 248 35.1
RcHm_v2.0_Chr3g0462281 Rosa chinensis HOM05D007653 ORTHO05D009670 9.8e-16 88.2 271 33.2
COL.COLO4_14486 Corchorus olitorius HOM05D007653 ORTHO05D009670 1.3e-15 87.8 259 32.4
Medtr4g014670 Medicago truncatula HOM05D007653 ORTHO05D009670 2.9e-15 86.7 263 32.3
EL10Ac5g12516 Beta vulgaris HOM05D007653 ORTHO05D009670 4.9e-15 85.9 257 32.7
Lalb_Chr01g0023261 Lupinus albus HOM05D007653 ORTHO05D009670 6.4e-15 85.5 277 28.9
SGA_v2.0_scaffold110G31197 Striga asiatica HOM05D007653 ORTHO05D009670 6.4e-15 85.5 233 30.5
TPR.G5265 Trifolium pratense HOM05D007653 ORTHO05D009670 3.2e-14 83.2 263 31.2
Aqoxy2G00810 Aquilegia oxysepala HOM05D007653 ORTHO05D009670 5.4e-14 82.4 248 31.0
VMungo1383G1231 Vigna mungo HOM05D007653 ORTHO05D009670 7.0e-14 82.0 267 31.1
AUR62030507 Chenopodium quinoa HOM05D007653 ORTHO05D009670 1.3e-12 77.8 251 30.3
Nn2g10953 Nelumbo nucifera HOM05D007653 ORTHO05D009670 3.9e-12 76.3 273 30.4
Eucgr.K00125 Eucalyptus grandis HOM05D007653 ORTHO05D009670 1.5e-11 74.3 255 29.4
Cc06_g00970 Coffea canephora HOM05D001108 ORTHO05D001619 1.9e-11 73.9 205 32.7
Cpa.g.sc120.35 Carica papaya HOM05D007653 ORTHO05D009670 9.5e-11 71.6 242 31.4
Haze_21051 Corylus avellana HOM05D007653 ORTHO05D009670 9.5e-11 71.6 252 31.3
Thhalv10010652m.g Eutrema salsugineum HOM05D007653 ORTHO05D009670 1.2e-10 71.2 269 31.2
Sabra16G0118500 Salix brachista HOM05D007653 ORTHO05D009670 1.2e-10 71.2 272 27.6
Aa31sc892G20 Aethionema arabicum HOM05D007653 ORTHO05D009670 1.6e-10 70.9 242 28.1
BcaB01g00421 Brassica carinata HOM05D007653 ORTHO05D009670 2.1e-10 70.5 252 29.8
CARHR161390 Cardamine hirsuta HOM05D007653 ORTHO05D009670 2.1e-10 70.5 264 29.9
AT3G51760 Arabidopsis thaliana HOM05D007653 ORTHO05D009670 3.6e-10 69.7 263 30.8
A09p44930 Brassica napus HOM05D007653 ORTHO05D009670 3.6e-10 69.7 250 29.6
BraA09t39952Z Brassica rapa HOM05D007653 ORTHO05D009670 3.6e-10 69.7 250 29.6
Ca_20332_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 3.6e-10 69.7 203 31.0
PSO339G6297 Papaver somniferum HOM05D007653 ORTHO05D009670 4.7e-10 69.3 239 27.6
BcaB01g00481 Brassica carinata HOM05D007653 ORTHO05D009670 6.2e-10 68.9 250 29.2
C08p26990 Brassica napus HOM05D007653 ORTHO05D009670 6.2e-10 68.9 250 29.2
BolC8t50316H Brassica oleracea HOM05D007653 ORTHO05D009670 6.2e-10 68.9 250 29.2
Phvul.008G094700 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 6.2e-10 68.9 270 27.4
Sp5g10510 Schrenkiella parvula HOM05D007653 ORTHO05D009670 8.0e-10 68.6 264 29.2
AUR62030786 Chenopodium quinoa HOM05D007653 ORTHO05D009670 1.8e-09 67.4 180 32.8
Psat7g247360 Pisum sativum HOM05D007653 ORTHO05D009670 1.8e-09 67.4 246 30.1
Carub.0005s1811 Capsella rubella HOM05D007653 ORTHO05D009670 2.6e-08 63.5 265 28.7
FAN09G3847 Fragaria x ananassa HOM05D007653 ORTHO05D009670 5.8e-08 62.4 241 31.1
Nn4g22427 Nelumbo nucifera HOM05D007653 ORTHO05D009670 2.2e-07 60.5 89 42.7
Nn7g37369 Nelumbo nucifera HOM05D007653 ORTHO05D009670 3.7e-07 59.7 89 41.6


User provided reference genes

Program Settings