Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g150132.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 2.9e-57 224.9 110 100.0
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.7e-52 209.1 110 92.7
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 7.8e-50 200.3 105 91.4
Solyc12g062733.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 7.0e-43 177.2 91 92.3
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 1.1e-40 169.9 91 87.9
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.5e-40 169.5 95 83.2
PGSC0003DMG400029733 Solanum tuberosum HOM05D009408 ORTHO05D000309 3.3e-40 168.3 91 87.9
Solyc03g096303.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 1.6e-39 166.0 91 87.9
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 3.1e-38 161.8 91 84.6
PGSC0003DMG400014126 Solanum tuberosum HOM05D009408 ORTHO05D000309 4.0e-38 161.4 91 84.6
PGSC0003DMG400044631 Solanum tuberosum HOM05D009408 ORTHO05D004497 4.3e-24 114.8 77 76.6
CAN.G1801.2 Capsicum annuum HOM05D009408 ORTHO05D000309 7.6e-21 104.0 97 54.6
CAN.G275.3 Capsicum annuum HOM05D009408 ORTHO05D004497 1.3e-20 103.2 98 53.1
CAN.G548.7 Capsicum annuum HOM05D009408 ORTHO05D000309 1.4e-19 99.8 97 52.6
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 5.4e-19 97.8 98 51.0
CAN.G637.19 Capsicum annuum HOM05D009408 ORTHO05D004497 3.5e-18 95.1 98 52.0
CAN.G1014.58 Capsicum annuum HOM05D009408 ORTHO05D000309 4.6e-18 94.7 92 52.2
CAN.G176.8 Capsicum annuum HOM05D009408 ORTHO05D000309 6.0e-18 94.4 97 52.6
CAN.G490.13 Capsicum annuum HOM05D009408 ORTHO05D000309 6.0e-18 94.4 97 49.5
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 7.8e-18 94.0 90 54.4
CAN.G11.43 Capsicum annuum HOM05D009408 ORTHO05D000309 2.3e-17 92.4 100 49.0
CAN.G98.25 Capsicum annuum HOM05D009408 ORTHO05D000309 3.0e-17 92.0 95 49.5
CAN.G1275.6 Capsicum annuum HOM05D009408 ORTHO05D000309 8.7e-17 90.5 89 53.9
CAN.G685.20 Capsicum annuum HOM05D009408 ORTHO05D000309 8.7e-17 90.5 89 53.9
CAN.G781.1 Capsicum annuum HOM05D009408 ORTHO05D000309 9.6e-16 87.0 92 48.9
PGSC0003DMG400044971 Solanum tuberosum HOM05D009408 ORTHO05D004497 1.1e-14 83.6 96 52.1
CAN.G100.78 Capsicum annuum HOM05D009408 ORTHO05D004497 2.4e-14 82.4 90 50.0
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.9e-12 75.5 80 47.5
CAN.G1538.14 Capsicum annuum HOM05D009408 ORTHO05D004497 6.4e-12 74.3 92 44.6
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.4e-12 74.3 80 46.2
CAN.G410.3 Capsicum annuum HOM05D009408 ORTHO05D004497 1.1e-11 73.6 84 48.8
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.4e-11 72.4 80 43.8
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.4e-11 71.2 81 43.2
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.3e-11 70.5 80 43.8
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.5e-10 68.6 80 42.5
Nitab4.5_0029284g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.0e-09 67.0 79 36.7
Nitab4.5_0001370g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.7e-09 66.2 88 38.6
Nitab4.5_0015725g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.0e-09 65.5 62 45.2
Nitab4.5_0007976g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.6e-09 64.3 60 43.3
Nitab4.5_0013592g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.6e-09 64.3 80 41.2
Nitab4.5_0005741g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.1e-08 63.5 80 41.2
Nitab4.5_0008946g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.1e-08 63.5 80 41.2
Nitab4.5_0005085g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.9e-08 62.8 43 53.5
Nitab4.5_0005772g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.5e-08 62.4 80 40.0
Nitab4.5_0008054g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.3e-08 62.0 59 39.0
Nitab4.5_0004970g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.3e-08 61.6 80 42.5
CAN.G1005.18 Capsicum annuum HOM05D011038 ORTHO05D004172 5.6e-08 61.2 58 48.3
Solyc12g150117.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 1.3e-07 60.1 56 46.4
Nitab4.5_0008271g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.8e-07 58.9 80 38.8
Actinidia16536 Actinidia chinensis HOM05D001383 ORTHO05D000309 3.6e-07 58.5 48 50.0
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 3.6e-07 58.5 94 38.3
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.6e-07 58.5 75 40.0
Nitab4.5_0000381g0280 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.6e-07 58.5 51 43.1
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-07 58.5 52 46.2
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.1e-07 57.4 77 37.7
Nitab4.5_0013705g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.1e-07 57.4 80 40.0
Oeu043155.1 Olea europaea HOM05D001383 ORTHO05D000309 8.1e-07 57.4 48 45.8
Nitab4.5_0000529g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.1e-06 57.0 46 47.8
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 1.4e-06 56.6 46 47.8
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.8e-06 56.2 76 38.2
Nitab4.5_0000337g0240 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.8e-06 56.2 46 47.8
Nitab4.5_0004685g0020 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.8e-06 56.2 46 47.8
CAN.G162.74 Capsicum annuum HOM05D004040 ORTHO05D000309 2.4e-06 55.8 79 39.2
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 2.4e-06 55.8 48 45.8
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-06 55.8 52 44.2
Solyc05g017863.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 2.4e-06 55.8 90 36.7
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.1e-06 55.5 78 32.1
Atru.chr1.3458 Acer truncatum HOM05D001383 ORTHO05D000309 4.0e-06 55.1 74 40.5
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.0e-06 55.1 76 36.8
Nitab4.5_0005808g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.0e-06 55.1 88 36.4
PGSC0003DMG402006646 Solanum tuberosum HOM05D009408 ORTHO05D000309 4.0e-06 55.1 44 50.0
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 4.0e-06 55.1 68 41.2
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.3e-06 54.7 44 47.7
Lj4g0023483 Lotus japonicus HOM05D050593 ORTHO05D010715 5.3e-06 54.7 93 33.3
Nitab4.5_0001759g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 5.3e-06 54.7 46 45.7
Nitab4.5_0002918g0110 Nicotiana tabacum HOM05D009794 ORTHO05D000309 5.3e-06 54.7 46 47.8
Nitab4.5_0008808g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.3e-06 54.7 75 41.3
Oeu045500.1 Olea europaea HOM05D001383 ORTHO05D000309 5.3e-06 54.7 48 41.7
Hma1.2p1_1041F.1_g251030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.9e-06 54.3 50 48.0
Nitab4.5_0016516g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.9e-06 54.3 55 41.8
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 6.9e-06 54.3 52 44.2
Ah.01g013150 Amaranthus hybridus HOM05D008124 ORTHO05D004072 9.0e-06 53.9 48 50.0
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 9.0e-06 53.9 78 38.5
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 9.0e-06 53.9 78 38.5
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 9.0e-06 53.9 68 41.2
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 9.0e-06 53.9 68 41.2


User provided reference genes

Program Settings