Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g082000.4 Solanum lycopersicum HOM05D002584 ORTHO05D002736 3.0e-304 1047.7 545 100.0
Sopen08g030300 Solanum pennellii HOM05D002584 ORTHO05D002736 3.8e-291 1004.2 549 96.0
PGSC0003DMG400012162 Solanum tuberosum HOM05D002584 ORTHO05D002736 4.0e-256 887.9 580 83.3
CAN.G532.93 Capsicum annuum HOM05D002584 ORTHO05D002736 7.0e-168 594.7 598 60.9
Nitab4.5_0000223g0150 Nicotiana tabacum HOM05D002584 ORTHO05D002736 3.5e-151 539.3 570 58.9
Nitab4.5_0004161g0010 Nicotiana tabacum HOM05D002584 ORTHO05D002736 9.0e-123 444.9 551 53.9
Peaxi162Scf00074g01214 Petunia axillaris HOM05D002584 ORTHO05D002736 4.6e-103 379.4 355 60.0
Peaxi162Scf00102g01740 Petunia axillaris HOM05D002584 ORTHO05D002736 5.7e-61 239.6 612 35.5
Peaxi162Scf00074g00127 Petunia axillaris HOM05D001220 ORTHO05D000110 2.9e-49 200.7 271 48.3
CAN.G792.63 Capsicum annuum HOM05D002584 ORTHO05D002736 1.7e-44 184.9 597 31.2
Dinv37552 Davidia involucrata HOM05D002584 ORTHO05D002736 8.0e-31 139.4 594 29.1
Oeu046819.1 Olea europaea HOM05D002584 ORTHO05D002736 8.6e-25 119.4 286 32.5
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 3.3e-24 117.5 496 28.6
TAR375G0150 Trochodendron aralioides HOM05D002584 ORTHO05D002736 2.8e-23 114.4 576 26.4
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.6e-23 114.0 105 61.0
Actinidia27338 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.4e-22 112.1 501 27.1
Dinv28338 Davidia involucrata HOM05D002584 ORTHO05D002736 1.5e-21 108.6 288 30.2
Nitab4.5_0002589g0030 Nicotiana tabacum HOM05D002584 ORTHO05D002736 2.0e-21 108.2 280 31.1
Cc08_g15750 Coffea canephora HOM05D002584 ORTHO05D002736 2.6e-21 107.8 303 31.7
MSTRG.1820 Avicennia marina HOM05D002584 ORTHO05D002736 9.9e-21 105.9 505 27.5
MD07G1284800 Malus domestica HOM05D002584 ORTHO05D002736 9.9e-21 105.9 176 38.1
Haze_00110 Corylus avellana HOM05D002584 ORTHO05D002736 1.7e-20 105.1 177 40.7
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 3.7e-20 104.0 313 31.3
Cfa016361 Carpinus fangiana HOM05D002584 ORTHO05D002736 1.4e-19 102.1 586 28.7
PSO017G4509 Papaver somniferum HOM05D002584 ORTHO05D002736 1.9e-19 101.7 225 34.7
PSO170G2676 Papaver somniferum HOM05D002584 ORTHO05D002736 1.9e-19 101.7 224 34.8
Nn3g19082 Nelumbo nucifera HOM05D002584 ORTHO05D002736 2.4e-19 101.3 156 40.4
PGR142G0759 Punica granatum HOM05D002584 ORTHO05D002736 3.2e-19 100.9 279 31.9
Solyc03g007420.3 Solanum lycopersicum HOM05D002584 ORTHO05D002736 3.2e-19 100.9 252 32.5
CAN.G792.48 Capsicum annuum HOM05D002584 ORTHO05D002736 4.1e-19 100.5 109 47.7
COL.COLO4_35658 Corchorus olitorius HOM05D002584 ORTHO05D002736 4.1e-19 100.5 164 39.0
Haze_00109 Corylus avellana HOM05D002584 ORTHO05D002736 4.1e-19 100.5 111 48.6
Cfa016360 Carpinus fangiana HOM05D002584 ORTHO05D002736 5.4e-19 100.1 270 29.6
Ciclev10004699m.g Citrus clementina HOM05D002584 ORTHO05D002736 5.4e-19 100.1 149 40.3
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 9.2e-19 99.4 547 26.5
RcHm_v2.0_Chr1g0380081 Rosa chinensis HOM05D002584 ORTHO05D002736 9.2e-19 99.4 227 32.2
FAN06G1680 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.6e-18 98.6 169 36.1
FAN06G3312 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.6e-18 98.6 169 36.1
Gohir.A12G251900 Gossypium hirsutum HOM05D002584 ORTHO05D002736 1.6e-18 98.6 281 29.9
ClCG05G008700 Citrullus lanatus HOM05D002584 ORTHO05D002736 2.1e-18 98.2 150 40.7
MD01G1215100 Malus domestica HOM05D002584 ORTHO05D002736 2.1e-18 98.2 146 39.7
PSO675G1901 Papaver somniferum HOM05D002584 ORTHO05D002736 2.1e-18 98.2 261 32.6
PSO675G6667 Papaver somniferum HOM05D002584 ORTHO05D002736 2.1e-18 98.2 146 41.8
PGSC0003DMG400009100 Solanum tuberosum HOM05D002584 ORTHO05D002736 2.1e-18 98.2 228 32.5
CAN.G1505.1 Capsicum annuum HOM05D002584 ORTHO05D002736 2.7e-18 97.8 111 47.7
Lj1g0020480 Lotus japonicus HOM05D002584 ORTHO05D002736 2.7e-18 97.8 287 28.9
Rhsim07G0084300 Rhododendron simsii HOM05D002584 ORTHO05D002736 3.5e-18 97.4 148 37.2
Sed0015947 Sechium edule HOM05D002584 ORTHO05D002736 3.5e-18 97.4 289 31.5
Sopen03g003380 Solanum pennellii HOM05D002584 ORTHO05D002736 4.6e-18 97.1 252 32.1
Atru.chr1.263 Acer truncatum HOM05D002584 ORTHO05D002736 6.0e-18 96.7 206 32.0
Lj1A1012T85 Lonicera japonica HOM05D002584 ORTHO05D002736 6.0e-18 96.7 286 31.5
Prupe.2G307000 Prunus persica HOM05D002584 ORTHO05D002736 7.8e-18 96.3 344 29.1
Nitab4.5_0000473g0110 Nicotiana tabacum HOM05D002584 ORTHO05D002736 1.7e-17 95.1 505 25.7
PSO339G0177 Papaver somniferum HOM05D002584 ORTHO05D002736 1.7e-17 95.1 272 32.0
Sabra15G0016800 Salix brachista HOM05D002584 ORTHO05D002736 1.7e-17 95.1 152 38.2
CiPaw.05G257900 Carya illinoinensis HOM05D002584 ORTHO05D002736 2.3e-17 94.7 128 43.0
HanXRQChr09g0253081 Helianthus annuus HOM05D002584 ORTHO05D002736 2.3e-17 94.7 203 34.0
Potri.015G022500 Populus trichocarpa HOM05D002584 ORTHO05D002736 2.3e-17 94.7 157 38.9
GSVIVG01028743001 Vitis vinifera HOM05D002584 ORTHO05D002736 3.0e-17 94.4 163 35.6
CAN.G792.56 Capsicum annuum HOM05D002584 ORTHO05D002736 5.1e-17 93.6 109 45.0
FvH4_7g31000 Fragaria vesca HOM05D002584 ORTHO05D002736 5.1e-17 93.6 289 28.7
Manes.06G157000 Manihot esculenta HOM05D002584 ORTHO05D002736 5.1e-17 93.6 164 34.8
CANSAT21G0945 Cannabis sativa HOM05D002584 ORTHO05D002736 6.6e-17 93.2 189 37.6
PSO063G1767 Papaver somniferum HOM05D002584 ORTHO05D002736 6.6e-17 93.2 146 39.0
Phvul.009G137300 Phaseolus vulgaris HOM05D002584 ORTHO05D002736 1.5e-16 92.0 144 38.2
TWI14G1284 Tripterygium wilfordii HOM05D002584 ORTHO05D002736 1.5e-16 92.0 319 29.2
vmacro06576 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 1.5e-16 92.0 310 28.4
HanXRQChr09g0253091 Helianthus annuus HOM05D002584 ORTHO05D002736 2.5e-16 91.3 141 39.7
Actinidia22714 Actinidia chinensis HOM05D002584 ORTHO05D002736 3.3e-16 90.9 134 38.1
PSO063G5339 Papaver somniferum HOM05D002584 ORTHO05D002736 3.3e-16 90.9 269 30.1
PSO591G0115 Papaver somniferum HOM05D002584 ORTHO05D002736 3.3e-16 90.9 145 38.6
Duzib205G0163 Durio zibethinus HOM05D002584 ORTHO05D002736 5.6e-16 90.1 239 32.2
Gorai.008G270900 Gossypium raimondii HOM05D002584 ORTHO05D002736 7.3e-16 89.7 293 28.3
Manes.01G045600 Manihot esculenta HOM05D002584 ORTHO05D002736 7.3e-16 89.7 541 26.4
PSO832G1019 Papaver somniferum HOM05D002584 ORTHO05D002736 7.3e-16 89.7 158 38.0
DCAR_005024 Daucus carota HOM05D002584 ORTHO05D002736 9.6e-16 89.4 268 28.0
PSO675G6647 Papaver somniferum HOM05D002584 ORTHO05D002736 1.6e-15 88.6 152 39.5
Potri.014G039200 Populus trichocarpa HOM05D002584 ORTHO05D002736 1.6e-15 88.6 594 23.9
CAN.G792.51 Capsicum annuum HOM05D002584 ORTHO05D002736 2.1e-15 88.2 171 36.3
Actinidia34198 Actinidia chinensis HOM05D002584 ORTHO05D002736 2.8e-15 87.8 363 27.8
VMungo1309G2151 Vigna mungo HOM05D002584 ORTHO05D002736 2.8e-15 87.8 144 35.4
Gohir.D12G253600 Gossypium hirsutum HOM05D002584 ORTHO05D002736 3.6e-15 87.4 293 28.0
Eucgr.K00328 Eucalyptus grandis HOM05D002584 ORTHO05D002736 4.7e-15 87.0 235 29.8
FAN10G3352 Fragaria x ananassa HOM05D002584 ORTHO05D002736 4.7e-15 87.0 183 32.8
FAN10G3419 Fragaria x ananassa HOM05D002584 ORTHO05D002736 4.7e-15 87.0 183 32.8
MBI06_g22400_MAGBIO Magnolia biondii HOM05D002584 ORTHO05D002736 4.7e-15 87.0 141 38.3
Thecc.03G192600 Theobroma cacao HOM05D002584 ORTHO05D002736 4.7e-15 87.0 170 32.9
BcaC01g06231 Brassica carinata HOM05D002584 ORTHO05D002736 6.2e-15 86.7 109 39.4
C03p17860 Brassica napus HOM05D002584 ORTHO05D002736 6.2e-15 86.7 109 39.4
BolC3t14193H Brassica oleracea HOM05D002584 ORTHO05D002736 6.2e-15 86.7 109 39.4
HanXRQChr09g0253061 Helianthus annuus HOM05D002584 ORTHO05D002736 8.1e-15 86.3 174 33.3
PSO017G6345 Papaver somniferum HOM05D002584 ORTHO05D002736 8.1e-15 86.3 135 41.5
EL10Ac3g05348 Beta vulgaris HOM05D002584 ORTHO05D002736 1.1e-14 85.9 109 42.2
CAN.G792.54 Capsicum annuum HOM05D002584 ORTHO05D002736 1.1e-14 85.9 234 30.8
PSO017G1735 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-14 85.9 156 35.9
PSO591G0137 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-14 85.5 158 36.7
QL09p010995 Quercus lobata HOM05D002584 ORTHO05D002736 1.4e-14 85.5 301 28.2
Sp6g15400 Schrenkiella parvula HOM05D002584 ORTHO05D002736 1.4e-14 85.5 109 39.4
A03p15280 Brassica napus HOM05D002584 ORTHO05D002736 1.8e-14 85.1 109 39.4
BraA03t10821Z Brassica rapa HOM05D002584 ORTHO05D002736 1.8e-14 85.1 109 39.4
Cc02_g01900 Coffea canephora HOM05D002584 ORTHO05D002736 1.8e-14 85.1 180 32.2
MSTRG.8680 Avicennia marina HOM05D002584 ORTHO05D002736 2.4e-14 84.7 265 27.5
FAN01G3133 Fragaria x ananassa HOM05D002584 ORTHO05D002736 2.4e-14 84.7 289 28.0
Lj1g0015870 Lotus japonicus HOM05D002584 ORTHO05D002736 2.4e-14 84.7 532 25.9
Oeu060971.1 Olea europaea HOM05D002584 ORTHO05D002736 2.4e-14 84.7 525 25.0
PSO764G0213 Papaver somniferum HOM05D002584 ORTHO05D002736 2.4e-14 84.7 146 41.8
Actinidia08626 Actinidia chinensis HOM05D002584 ORTHO05D002736 3.1e-14 84.3 164 36.0
PSO210G0413 Papaver somniferum HOM05D002584 ORTHO05D002736 3.1e-14 84.3 147 37.4
Hund04830 Selenicereus undatus HOM05D002584 ORTHO05D002736 3.1e-14 84.3 146 37.0
BcaB01g04236 Brassica carinata HOM05D002584 ORTHO05D002736 4.0e-14 84.0 145 36.6
Lalb_Chr08g0240601 Lupinus albus HOM05D002584 ORTHO05D002736 5.2e-14 83.6 178 34.3
SalBow4G3348 Salvia bowleyana HOM05D002584 ORTHO05D002736 5.2e-14 83.6 292 29.8
AUR62019335 Chenopodium quinoa HOM05D002584 ORTHO05D002736 6.8e-14 83.2 162 34.6
Lsat_1_v5_gn_9_57421 Lactuca sativa HOM05D002584 ORTHO05D002736 6.8e-14 83.2 148 34.5
PSO478G0802 Papaver somniferum HOM05D002584 ORTHO05D002736 6.8e-14 83.2 188 33.0
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea HOM05D002584 ORTHO05D002736 8.9e-14 82.8 242 29.8
SGA_v2.0_scaffold144G35846 Striga asiatica HOM05D035903 ORTHO05D002736 8.9e-14 82.8 148 39.2
Aa31LG3G2620 Aethionema arabicum HOM05D002584 ORTHO05D002736 1.5e-13 82.0 155 35.5
PSO832G3317 Papaver somniferum HOM05D002584 ORTHO05D002736 1.5e-13 82.0 171 33.3
PSO832G4482 Papaver somniferum HOM05D002584 ORTHO05D002736 1.5e-13 82.0 173 39.3
CARHR266290 Cardamine hirsuta HOM05D002584 ORTHO05D002736 3.4e-13 80.9 137 34.3
MELO3C026935.2 Cucumis melo HOM05D002584 ORTHO05D002736 3.4e-13 80.9 568 27.5
PSO732G0573 Papaver somniferum HOM05D002584 ORTHO05D002736 4.4e-13 80.5 159 39.0
PSO732G0710 Papaver somniferum HOM05D002584 ORTHO05D002736 4.4e-13 80.5 146 41.8
Rhsim03G0198700 Rhododendron simsii HOM05D002584 ORTHO05D002736 5.8e-13 80.1 585 24.3
AL8G27880 Arabidopsis lyrata HOM05D002584 ORTHO05D002736 7.6e-13 79.7 224 28.6
AUR62041778 Chenopodium quinoa HOM05D002584 ORTHO05D002736 7.6e-13 79.7 295 28.5
Thhalv10013960m.g Eutrema salsugineum HOM05D002584 ORTHO05D002736 7.6e-13 79.7 155 35.5
PSO675G1890 Papaver somniferum HOM05D002584 ORTHO05D002736 9.9e-13 79.3 170 34.1
EL10Ac4g09958 Beta vulgaris HOM05D002584 ORTHO05D002736 2.2e-12 78.2 552 25.4
Atru.chr9.2048 Acer truncatum HOM05D002584 ORTHO05D002736 2.9e-12 77.8 526 23.0
Gohir.D12G252800 Gossypium hirsutum HOM05D002584 ORTHO05D002736 2.9e-12 77.8 509 23.8
AT5G53220 Arabidopsis thaliana HOM05D002584 ORTHO05D002736 3.8e-12 77.4 167 31.1
PSO017G5210 Papaver somniferum HOM05D002584 ORTHO05D002736 3.8e-12 77.4 179 34.6
ClCG07G014870 Citrullus lanatus HOM05D002584 ORTHO05D002736 4.9e-12 77.0 176 33.0
Os01g0221300 Oryza sativa ssp. japonica HOM05D002584 ORTHO05D002736 4.9e-12 77.0 144 31.2
Zm00001eb119710 Zea mays HOM05D002584 ORTHO05D002736 4.9e-12 77.0 139 35.3
PSO170G4022 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-11 75.9 179 34.6
PSO210G0379 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-11 75.9 179 34.6
PSO732G0732 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-11 75.9 184 34.2
Migut.E01018 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.4e-11 75.5 142 35.9
PSO675G0694 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-11 75.5 271 29.2
Migut.A00683 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.9e-11 75.1 145 34.5
PSO732G0349 Papaver somniferum HOM05D002584 ORTHO05D002736 2.4e-11 74.7 166 36.1
Sabra14G0028500 Salix brachista HOM05D002584 ORTHO05D002736 2.4e-11 74.7 593 23.6
CAN.G792.61 Capsicum annuum HOM05D002584 ORTHO05D002736 3.2e-11 74.3 231 28.1
Migut.A00681 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.2e-11 74.3 106 39.6
Migut.E01233 Erythranthe guttata HOM05D002584 ORTHO05D002736 4.2e-11 73.9 281 27.0
Hund11407 Selenicereus undatus HOM05D002584 ORTHO05D002736 4.2e-11 73.9 271 28.4
Migut.F00244 Erythranthe guttata HOM05D002584 ORTHO05D002736 5.4e-11 73.6 112 35.7
ECA232G0187 Erigeron canadensis HOM05D002584 ORTHO05D002736 7.1e-11 73.2 120 36.7
Migut.J00941 Erythranthe guttata HOM05D002584 ORTHO05D002736 7.1e-11 73.2 144 32.6
HanXRQChr17g0535091 Helianthus annuus HOM05D002584 ORTHO05D002736 7.1e-11 73.2 138 35.5
Migut.O00408 Erythranthe guttata HOM05D002584 ORTHO05D002736 9.3e-11 72.8 137 35.8
PSO675G5115 Papaver somniferum HOM05D002584 ORTHO05D002736 9.3e-11 72.8 234 30.8
AUR62006155 Chenopodium quinoa HOM05D002584 ORTHO05D002736 1.2e-10 72.4 150 32.7
PSO764G0332 Papaver somniferum HOM05D002584 ORTHO05D002736 1.2e-10 72.4 213 30.0
Eucgr.E00841 Eucalyptus grandis HOM05D002584 ORTHO05D002736 1.6e-10 72.0 112 40.2
ATR1093G048 Amborella trichopoda HOM05D002584 ORTHO05D002736 2.1e-10 71.6 405 25.9
Medtr1g028620 Medicago truncatula HOM05D002584 ORTHO05D002736 2.7e-10 71.2 137 32.8
Peaxi162Scf00904g00320 Petunia axillaris HOM05D002584 ORTHO05D002736 3.5e-10 70.9 623 24.2
PSO063G5830 Papaver somniferum HOM05D002584 ORTHO05D002736 6.0e-10 70.1 110 40.0
PSO421G0489 Papaver somniferum HOM05D002584 ORTHO05D002736 6.0e-10 70.1 108 35.2
Medtr1g028880 Medicago truncatula HOM05D002584 ORTHO05D002736 1.0e-09 69.3 122 36.1
PGSC0003DMG402019602 Solanum tuberosum HOM05D002584 ORTHO05D002736 1.0e-09 69.3 52 65.4
SGA_v2.0_scaffold192G40581 Striga asiatica HOM05D002584 ORTHO05D002736 1.0e-09 69.3 205 27.8
arahy.Tifrunner.gnm1.ann1.84BZB4 Arachis hypogaea HOM05D002584 ORTHO05D002736 3.0e-09 67.8 110 35.5
vmacro13916 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 8.7e-09 66.2 202 28.2
PSO782G5749 Papaver somniferum HOM05D002584 ORTHO05D002736 1.5e-08 65.5 110 38.2
Sed0013734 Sechium edule HOM05D002584 ORTHO05D002736 1.9e-08 65.1 140 30.0
ECA246G0735 Erigeron canadensis HOM05D002584 ORTHO05D002736 2.5e-08 64.7 114 36.0
ECA246G4061 Erigeron canadensis HOM05D002584 ORTHO05D002736 3.3e-08 64.3 137 31.4
Sed0024155 Sechium edule HOM05D002584 ORTHO05D002736 3.3e-08 64.3 141 27.7
MELO3C016311.2 Cucumis melo HOM05D002584 ORTHO05D002736 4.3e-08 63.9 175 28.6
PSO675G5053 Papaver somniferum HOM05D002584 ORTHO05D002736 4.3e-08 63.9 203 31.0
Medtr1g028850 Medicago truncatula HOM05D002584 ORTHO05D002736 7.3e-08 63.2 109 36.7
TPR.G33314 Trifolium pratense HOM05D002584 ORTHO05D002736 9.6e-08 62.8 164 29.3
FAN03G2222 Fragaria x ananassa HOM05D002584 ORTHO05D002736 4.8e-07 60.5 167 31.1
PGSC0003DMG400001678 Solanum tuberosum HOM05D000032 ORTHO05D002736 8.1e-07 59.7 92 46.7
QL02p031474 Quercus lobata HOM05D002584 ORTHO05D002736 1.1e-06 59.3 579 24.0
Ciclev10019635m.g Citrus clementina HOM05D002584 ORTHO05D002736 1.4e-06 58.9 572 21.9
Sc01g0004580 Simmondsia chinensis HOM05D002584 ORTHO05D002736 1.4e-06 58.9 129 30.2
Ah.07g206030 Amaranthus hybridus HOM05D002584 ORTHO05D002736 2.4e-06 58.2 477 23.3


User provided reference genes

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