Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g080530.1 Solanum lycopersicum HOM05D008129 ORTHO05D010232 1.1e-101 373.2 183 100.0
PGSC0003DMG400003052 Solanum tuberosum HOM05D008129 ORTHO05D010232 1.3e-86 323.2 183 86.3
Nitab4.5_0003924g0090 Nicotiana tabacum HOM05D008129 ORTHO05D010232 6.6e-62 241.1 187 65.2
Sopen08g028850 Solanum pennellii HOM05D008129 ORTHO05D010232 1.3e-38 163.7 84 97.6
Dinv38993 Davidia involucrata HOM05D008129 ORTHO05D010232 9.0e-35 151.0 187 45.5
Hma1.2p1_0514F.1_g169980 Hydrangea macrophylla HOM05D008129 ORTHO05D010232 2.0e-34 149.8 180 46.1
CSS0045994 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 1.8e-30 136.7 186 41.9
Prupe.5G093100 Prunus persica HOM05D008129 ORTHO05D010232 3.0e-30 136.0 178 42.1
Oeu029783.1 Olea europaea HOM05D008129 ORTHO05D010232 4.8e-28 128.6 175 41.7
CSS0008314 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 6.2e-28 128.3 198 38.9
Rhsim07G0093300 Rhododendron simsii HOM05D008129 ORTHO05D010232 1.4e-27 127.1 187 40.1
CAN.G981.9 Capsicum annuum HOM05D008129 ORTHO05D010232 1.8e-27 126.7 84 71.4
ECA246G2221 Erigeron canadensis HOM05D008129 ORTHO05D010232 5.3e-27 125.2 191 42.9
SGA_v2.0_scaffold144G35967 Striga asiatica HOM05D008129 ORTHO05D010232 5.3e-27 125.2 181 45.3
Thecc.03G273100 Theobroma cacao HOM05D008129 ORTHO05D010232 6.9e-27 124.8 182 40.1
RcHm_v2.0_Chr7g0198961 Rosa chinensis HOM05D008129 ORTHO05D010232 3.4e-26 122.5 150 44.0
Cc08_g14170 Coffea canephora HOM05D008129 ORTHO05D010232 4.5e-26 122.1 205 38.0
TAR629G0329 Trochodendron aralioides HOM05D008129 ORTHO05D010232 7.6e-26 121.3 174 40.8
FvH4_5g01760 Fragaria vesca HOM05D008129 ORTHO05D010232 2.2e-25 119.8 150 43.3
FAN18G4443 Fragaria x ananassa HOM05D008129 ORTHO05D010232 2.2e-25 119.8 150 43.3
COL.COLO4_05253 Corchorus olitorius HOM05D008129 ORTHO05D010232 2.9e-25 119.4 147 42.9
Gohir.D03G153100 Gossypium hirsutum HOM05D008129 ORTHO05D010232 2.9e-25 119.4 149 43.6
FAN04G1130 Fragaria x ananassa HOM05D008129 ORTHO05D010232 3.8e-25 119.0 150 43.3
FAN13G1875 Fragaria x ananassa HOM05D008129 ORTHO05D010232 3.8e-25 119.0 150 43.3
FAN08G0538 Fragaria x ananassa HOM05D008129 ORTHO05D010232 4.9e-25 118.6 150 43.3
Lj2P194T38 Lonicera japonica HOM05D008129 ORTHO05D010232 4.9e-25 118.6 186 36.6
Ciclev10022388m.g Citrus clementina HOM05D008129 ORTHO05D010232 6.4e-25 118.2 149 45.0
Sabra01G0081800 Salix brachista HOM05D008129 ORTHO05D010232 1.4e-24 117.1 189 37.6
Gohir.A03G018500 Gossypium hirsutum HOM05D008129 ORTHO05D010232 3.2e-24 115.9 149 43.0
Potri.001G108300 Populus trichocarpa HOM05D008129 ORTHO05D010232 3.2e-24 115.9 189 37.6
Gorai.003G160700 Gossypium raimondii HOM05D008129 ORTHO05D010232 5.5e-24 115.2 149 43.0
Manes.01G065300 Manihot esculenta HOM05D008129 ORTHO05D010232 5.5e-24 115.2 188 38.8
Migut.E01284 Erythranthe guttata HOM05D008129 ORTHO05D010232 2.1e-23 113.2 147 44.9
MD00G1110200 Malus domestica HOM05D008129 ORTHO05D010232 4.6e-23 112.1 150 42.0
MD04G1064800 Malus domestica HOM05D008129 ORTHO05D010232 4.6e-23 112.1 148 41.9
Cfa012120 Carpinus fangiana HOM05D008129 ORTHO05D010232 1.3e-22 110.5 187 35.8
Haze_08930 Corylus avellana HOM05D008129 ORTHO05D010232 2.3e-22 109.8 188 36.2
AUR62010633 Chenopodium quinoa HOM05D008129 ORTHO05D010232 3.0e-22 109.4 190 35.8
EL10Ac5g12748 Beta vulgaris HOM05D008129 ORTHO05D010232 5.1e-22 108.6 197 37.1
Nn6g34205 Nelumbo nucifera HOM05D008129 ORTHO05D010232 1.4e-19 100.5 192 34.4
CiPaw.12G097000 Carya illinoinensis HOM05D008129 ORTHO05D010232 3.1e-19 99.4 146 37.7
TAR375G1113 Trochodendron aralioides HOM05D008129 ORTHO05D010232 6.9e-19 98.2 119 42.9
CiPaw.11G139400 Carya illinoinensis HOM05D008129 ORTHO05D010232 1.5e-18 97.1 178 34.8
Lalb_Chr09g0333221 Lupinus albus HOM05D008129 ORTHO05D010232 2.0e-18 96.7 181 33.1
QL12p017610 Quercus lobata HOM05D008129 ORTHO05D010232 2.0e-18 96.7 158 36.1
QL12p017600 Quercus lobata HOM05D008129 ORTHO05D010232 3.4e-18 95.9 164 36.0
Eucgr.E00553 Eucalyptus grandis HOM05D008129 ORTHO05D010232 5.8e-18 95.1 150 34.0
Medtr8g096860 Medicago truncatula HOM05D008129 ORTHO05D010232 6.5e-17 91.7 163 31.9
SGA_v2.0_scaffold385G50459 Striga asiatica HOM05D008129 ORTHO05D010232 8.4e-17 91.3 120 40.8
Nitab4.5_0005213g0010 Nicotiana tabacum HOM05D008129 ORTHO05D010232 9.3e-16 87.8 187 35.8
Psat7g036080 Pisum sativum HOM05D008129 ORTHO05D010232 2.7e-15 86.3 142 35.9
COL.COLO4_05254 Corchorus olitorius HOM05D008129 ORTHO05D010232 3.5e-15 85.9 177 32.2
MELO3C005638.2 Cucumis melo HOM05D008129 ORTHO05D010232 2.3e-14 83.2 144 36.1
TPR.G12796 Trifolium pratense HOM05D000268 ORTHO05D000261 5.1e-14 82.0 176 29.0
CsaV3_5G003170 Cucumis sativus L. HOM05D008129 ORTHO05D010232 8.7e-14 81.3 144 36.8
vmacro00355 Vaccinium macrocarpon HOM05D001075 ORTHO05D001779 1.5e-13 80.5 97 40.2
Eucgr.D01909 Eucalyptus grandis HOM05D008129 ORTHO05D010232 3.1e-11 72.8 130 31.5
Oeu062744.1 Olea europaea HOM05D008129 ORTHO05D010232 4.1e-11 72.4 83 48.2
Thecc.03G273000 Theobroma cacao HOM05D008129 ORTHO05D010232 4.1e-11 72.4 145 33.1
Dinv37674 Davidia involucrata HOM05D008129 ORTHO05D010232 7.7e-10 68.2 55 56.4
Phvul.002G286400 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 2.9e-09 66.2 142 32.4
Glyma.11G025800 Glycine max HOM05D008129 ORTHO05D010232 3.8e-09 65.9 177 28.2
VMungo1215G1765 Vigna mungo HOM05D008129 ORTHO05D010232 3.8e-09 65.9 162 28.4
Gohir.D03G153200 Gossypium hirsutum HOM05D008129 ORTHO05D010232 5.0e-09 65.5 169 30.2
Zm00001eb269500 Zea mays HOM05D041313 ORTHO05D010232 8.5e-09 64.7 151 29.8
Os06g0128800 Oryza sativa ssp. japonica HOM05D041313 ORTHO05D010232 3.2e-08 62.8 143 30.1
Gohir.A03G018400 Gossypium hirsutum HOM05D008129 ORTHO05D010232 4.2e-08 62.4 94 36.2
Gorai.003G160800 Gossypium raimondii HOM05D008129 ORTHO05D010232 4.2e-08 62.4 151 31.1
Phvul.002G155100 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 1.2e-07 60.8 177 26.6
Lj2g0000650 Lotus japonicus HOM05D008129 ORTHO05D010232 1.6e-07 60.5 80 37.5
AUR62017276 Chenopodium quinoa HOM05D008129 ORTHO05D010232 3.6e-07 59.3 81 40.7
RcHm_v2.0_Chr1g0352741 Rosa chinensis HOM05D002113 ORTHO05D002124 7.9e-07 58.2 141 27.7


User provided reference genes

Program Settings