Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g080020.1 Solanum lycopersicum HOM05D009680 ORTHO05D010443 3.9e-59 231.1 105 100.0
Sopen08g028370 Solanum pennellii HOM05D000015 ORTHO05D000803 1.2e-47 193.0 88 94.3
Peaxi162Scf00620g00054 Petunia axillaris HOM05D009680 ORTHO05D010443 1.1e-37 159.8 108 67.6
CAN.G630.3 Capsicum annuum HOM05D009680 ORTHO05D010443 1.2e-36 156.4 90 75.6
CAN.G630.4 Capsicum annuum HOM05D009680 ORTHO05D010443 3.3e-34 148.3 89 70.8
Nitab4.5_0006484g0030 Nicotiana tabacum HOM05D009680 ORTHO05D000653 2.6e-31 138.7 85 61.2
CAN.G630.1 Capsicum annuum HOM05D009680 ORTHO05D010443 4.5e-31 137.9 116 60.3
Peaxi162Scf00620g00517 Petunia axillaris HOM05D009680 ORTHO05D010443 6.5e-30 134.0 108 58.3
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 8.5e-30 133.7 84 67.9
PGSC0003DMG400026953 Solanum tuberosum HOM05D009680 ORTHO05D010443 5.5e-29 131.0 86 64.0
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 9.4e-29 130.2 99 58.6
CAN.G630.2 Capsicum annuum HOM05D009680 ORTHO05D000653 1.0e-27 126.7 86 66.3
PGSC0003DMG400026952 Solanum tuberosum HOM05D009680 ORTHO05D010443 3.0e-27 125.2 89 60.7
Peaxi162Scf01517g00130 Petunia axillaris HOM05D009680 ORTHO05D010443 8.8e-27 123.6 106 56.6
CAN.G1513.6 Capsicum annuum HOM05D009680 ORTHO05D010443 2.6e-26 122.1 101 52.5
CAN.G630.38 Capsicum annuum HOM05D009680 ORTHO05D010443 7.0e-24 114.0 89 64.0
CAN.G630.39 Capsicum annuum HOM05D009680 ORTHO05D010443 1.2e-23 113.2 89 61.8
Nitab4.5_0010303g0010 Nicotiana tabacum HOM05D009680 ORTHO05D010443 3.6e-20 101.7 72 68.1
PGSC0003DMG400005142 Solanum tuberosum HOM05D009680 ORTHO05D010443 2.3e-19 99.0 85 48.2
Solyc11g007050.1 Solanum lycopersicum HOM05D009680 ORTHO05D000653 4.1e-16 88.2 86 47.7
Sopen11g002970 Solanum pennellii HOM05D009680 ORTHO05D000653 1.2e-15 86.7 102 41.2
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 3.5e-15 85.1 89 43.8
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 5.0e-14 81.3 88 44.3
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 5.0e-14 81.3 88 44.3
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 1.1e-13 80.1 88 40.9
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 1.2e-12 76.6 91 41.8
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.7e-12 75.5 91 45.1
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 3.6e-12 75.1 85 42.4
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 6.1e-12 74.3 92 41.3
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 6.1e-12 74.3 92 41.3
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 6.1e-12 74.3 87 44.8
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.4e-11 73.2 88 37.5
TAR376G0093 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.8e-11 72.8 85 42.4
Carub.0008s0288 Capsella rubella HOM05D008628 ORTHO05D010443 4.0e-11 71.6 93 44.1
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 4.0e-11 71.6 86 39.5
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.2e-11 71.2 86 44.2
PGSC0003DMG400034659 Solanum tuberosum HOM05D009680 ORTHO05D010443 5.2e-11 71.2 101 38.6
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 6.8e-11 70.9 86 40.7
Migut.L00816 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.2e-10 70.1 89 40.4
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.2e-10 70.1 91 41.8
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.2e-10 70.1 91 41.8
Migut.C00655 Erythranthe guttata HOM05D009680 ORTHO05D000653 2.0e-10 69.3 85 41.2
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 2.6e-10 68.9 86 40.7
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 5.7e-10 67.8 87 41.4
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 5.7e-10 67.8 90 41.1
Lsat_1_v5_gn_1_35961 Lactuca sativa HOM05D001004 ORTHO05D000653 5.7e-10 67.8 89 42.7
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 7.5e-10 67.4 87 41.4
AT3G46860 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 3.7e-09 65.1 85 38.8
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 3.7e-09 65.1 90 40.0
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 3.7e-09 65.1 90 40.0
Cc07_g18340 Coffea canephora HOM05D001004 ORTHO05D000653 4.9e-09 64.7 85 43.5
A06p46700 Brassica napus HOM05D008628 ORTHO05D010443 6.3e-09 64.3 88 38.6
FAN28G2625 Fragaria x ananassa HOM05D001004 ORTHO05D000653 6.3e-09 64.3 73 39.7
BraA06t27542Z Brassica rapa HOM05D008628 ORTHO05D010443 1.4e-08 63.2 88 38.6
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.8e-08 62.8 88 43.2
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.8e-08 62.8 89 38.2
RcHm_v2.0_Chr2g0105871 Rosa chinensis HOM05D001004 ORTHO05D000653 2.4e-08 62.4 91 38.5
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 4.1e-08 61.6 91 38.5
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 9.2e-08 60.5 90 41.1
MELO3C020883.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.2e-07 60.1 63 39.7
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.2e-07 60.1 88 39.8
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 1.6e-07 59.7 78 37.2
Carub.0003s2826 Capsella rubella HOM05D001004 ORTHO05D000653 3.5e-07 58.5 90 36.7
AUR62006912 Chenopodium quinoa HOM05D001004 ORTHO05D000653 3.5e-07 58.5 88 39.8
BolC3t14835H Brassica oleracea HOM05D001004 ORTHO05D000653 4.5e-07 58.2 89 37.1
Peaxi162Scf79264g00001 Petunia axillaris HOM05D008628 ORTHO05D010443 4.5e-07 58.2 63 41.3
Eucgr.H02107 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.9e-07 57.8 61 44.3
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 5.9e-07 57.8 61 42.6
Eucgr.H05126 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.7e-07 57.4 61 37.7
Eucgr.H05137 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.7e-07 57.4 61 42.6
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 1.0e-06 57.0 63 42.9
CiPaw.01G189600 Carya illinoinensis HOM05D001004 ORTHO05D000653 1.3e-06 56.6 61 42.6
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.3e-06 56.6 89 39.3
Dinv43966 Davidia involucrata HOM05D008628 ORTHO05D010443 1.7e-06 56.2 64 40.6
Actinidia08437 Actinidia chinensis HOM05D001004 ORTHO05D000653 2.3e-06 55.8 62 38.7
Migut.D01298 Erythranthe guttata HOM05D009680 ORTHO05D000653 2.3e-06 55.8 87 36.8
Nn1g02639 Nelumbo nucifera HOM05D001004 ORTHO05D000653 2.3e-06 55.8 61 42.6
Psat4g107840 Pisum sativum HOM05D001004 ORTHO05D000653 2.3e-06 55.8 61 36.1
PGR102G1398 Punica granatum HOM05D001004 ORTHO05D000653 2.3e-06 55.8 61 39.3
AUR62006914 Chenopodium quinoa HOM05D008628 ORTHO05D010443 2.9e-06 55.5 66 43.9
Migut.H02350 Erythranthe guttata HOM05D009680 ORTHO05D000653 2.9e-06 55.5 87 39.1
Glyma.10G184700 Glycine max HOM05D001004 ORTHO05D000653 3.8e-06 55.1 61 39.3
TPR.G31261 Trifolium pratense HOM05D001004 ORTHO05D000653 3.8e-06 55.1 61 39.3
CARHR155530 Cardamine hirsuta HOM05D009680 ORTHO05D000653 5.0e-06 54.7 67 41.8
COL.COLO4_12159 Corchorus olitorius HOM05D001004 ORTHO05D000653 5.0e-06 54.7 61 41.0
Lalb_Chr21g0312251 Lupinus albus HOM05D001004 ORTHO05D000653 5.0e-06 54.7 61 37.7
CsaV3_2G017000 Cucumis sativus L. HOM05D001004 ORTHO05D000653 6.6e-06 54.3 63 38.1
Migut.A00977 Erythranthe guttata HOM05D001004 ORTHO05D000653 6.6e-06 54.3 61 39.3
Potri.010G075200 Populus trichocarpa HOM05D001004 ORTHO05D000653 6.6e-06 54.3 61 37.7
Actinidia05460 Actinidia chinensis HOM05D001004 ORTHO05D000653 8.6e-06 53.9 62 38.7
Cc03_g04970 Coffea canephora HOM05D001004 ORTHO05D000653 8.6e-06 53.9 61 39.3
Sabra10G0033600 Salix brachista HOM05D001004 ORTHO05D000653 8.6e-06 53.9 61 39.3


User provided reference genes

Program Settings