Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.3e-129 466.5 247 100.0
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 2.9e-129 465.3 247 99.6
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 7.4e-125 450.7 247 97.2
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 3.9e-118 428.3 246 92.3
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.5e-114 416.4 247 89.5
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 5.9e-114 414.5 247 88.7
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 5.9e-106 387.9 247 81.0
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 8.3e-84 314.3 238 70.2
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 2.4e-83 312.8 232 70.7
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 7.0e-83 311.2 247 68.8
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.6e-82 310.1 247 66.0
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 7.7e-82 307.8 247 65.6
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 7.7e-82 307.8 245 67.8
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.3e-81 307.0 215 74.0
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 1.7e-81 306.6 214 74.8
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 2.9e-81 305.8 246 67.5
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 3.8e-81 305.4 247 66.8
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 1.1e-80 303.9 238 69.7
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 1.1e-80 303.9 223 70.4
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 2.5e-80 302.8 211 74.4
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 3.3e-80 302.4 245 66.5
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.3e-80 302.4 215 73.0
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 3.3e-80 302.4 247 66.4
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 7.2e-80 301.2 223 71.3
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.7e-79 298.5 247 66.4
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.7e-79 298.5 247 66.4
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.8e-78 296.6 248 66.5
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 2.3e-78 296.2 215 71.6
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.3e-78 296.2 216 71.8
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 3.0e-78 295.8 247 65.6
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 4.0e-78 295.4 216 70.4
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.0e-78 295.4 247 65.6
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 5.2e-78 295.0 245 65.3
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 5.2e-78 295.0 248 62.5
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 5.2e-78 295.0 247 63.6
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 6.8e-78 294.7 206 73.3
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.5e-77 293.5 228 65.4
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.5e-77 293.5 248 64.5
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 215 73.0
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 3.4e-77 292.4 216 69.9
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 5.7e-77 291.6 247 64.0
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 5.7e-77 291.6 209 71.3
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 5.7e-77 291.6 245 63.7
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 5.7e-77 291.6 248 64.5
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 5.7e-77 291.6 238 66.4
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 5.7e-77 291.6 241 66.8
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 1.7e-76 290.0 215 70.2
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 2.2e-76 289.7 204 74.5
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 8.3e-76 287.7 207 71.0
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.1e-75 287.3 245 62.9
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.4e-75 287.0 245 65.3
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.8e-75 286.6 230 66.1
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.4e-75 286.2 228 65.8
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 7.0e-75 284.6 243 62.6
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 7.0e-75 284.6 245 62.9
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 1.6e-74 283.5 238 64.3
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.7e-74 282.7 209 70.8
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 5.9e-74 281.6 209 69.9
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 2.9e-73 279.3 237 62.4
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 2.9e-73 279.3 209 69.9
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 3.9e-73 278.9 237 62.4
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 5.0e-73 278.5 217 65.0
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 6.6e-73 278.1 237 62.0
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 6.6e-73 278.1 194 74.7
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 8.6e-73 277.7 227 62.6
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 8.6e-73 277.7 228 63.6
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 8.6e-73 277.7 228 63.6
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 2.5e-72 276.2 206 68.4
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 3.3e-72 275.8 208 67.8
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 3.3e-72 275.8 245 61.6
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 3.3e-72 275.8 219 66.2
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 4.3e-72 275.4 237 61.6
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.2e-71 273.9 214 64.0
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 1.2e-71 273.9 217 64.1
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.6e-71 273.5 214 64.0
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 2.8e-71 272.7 207 68.6
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 3.6e-71 272.3 217 63.6
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 3.6e-71 272.3 226 62.4
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 8.0e-71 271.2 226 64.2
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 8.0e-71 271.2 244 60.2
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 2.0e-69 266.5 208 68.3
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 7.5e-69 264.6 207 66.2
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 2.2e-68 263.1 215 64.2
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.9e-67 260.0 233 60.9
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 1.9e-67 260.0 241 58.5
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 1.6e-66 256.9 252 57.9
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 7.8e-66 254.6 215 62.3
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.3e-65 253.8 252 56.7
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 6.6e-65 251.5 247 58.3
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 6.6e-65 251.5 232 58.6
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 2.8e-63 246.1 206 61.7
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 2.2e-60 236.5 218 56.9
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 2.9e-60 236.1 228 57.5
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 1.4e-59 233.8 209 58.9
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 2.4e-59 233.0 216 56.9
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 5.4e-59 231.9 169 70.4
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 1.0e-57 227.6 185 63.2
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 7.3e-56 221.5 207 55.1
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.4e-53 212.6 145 74.5
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 8.6e-49 198.0 227 48.5
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 4.3e-40 169.1 157 62.4
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 7.6e-37 158.3 211 45.0
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 2.9e-36 156.4 154 55.8
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.1e-30 137.9 99 72.7
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 9.0e-30 134.8 123 61.8
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 4.9e-28 129.0 207 41.1
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 6.7e-25 118.6 103 60.2
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.8e-23 112.5 79 73.4
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 9.3e-19 98.2 203 33.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 5.5e-11 72.4 156 28.8
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.2e-10 71.2 65 61.5
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 3.0e-09 66.6 52 69.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 9.0e-06 55.1 46 60.9


User provided reference genes

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