Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g078840.3 Solanum lycopersicum HOM05D012984 ORTHO05D010335 1.6e-80 302.8 156 100.0
PGSC0003DMG400004801 Solanum tuberosum HOM05D012984 ORTHO05D010335 3.8e-66 255.0 156 88.5
Nitab4.5_0000312g0200 Nicotiana tabacum HOM05D012984 ORTHO05D010335 7.9e-48 194.1 159 71.7
Sopen08g027300 Solanum pennellii HOM05D012984 ORTHO05D010335 1.5e-46 189.9 96 99.0
Nitab4.5_0002727g0010 Nicotiana tabacum HOM05D012984 ORTHO05D010335 2.2e-42 176.0 158 66.5
CAN.G1218.11 Capsicum annuum HOM05D012984 ORTHO05D010335 5.9e-35 151.4 102 82.4
Sabra01G0094500 Salix brachista HOM05D009510 ORTHO05D010335 2.6e-11 72.8 184 32.6
Ciclev10022879m.g Citrus clementina HOM05D009510 ORTHO05D010335 1.7e-10 70.1 145 36.6
Migut.A00962 Erythranthe guttata HOM05D012984 ORTHO05D010335 2.2e-10 69.7 155 37.4
Atru.chr9.1339 Acer truncatum HOM05D009510 ORTHO05D010335 3.8e-10 68.9 174 32.2
HanXRQChr03g0088641 Helianthus annuus HOM05D012984 ORTHO05D010335 3.8e-10 68.9 159 35.8
Potri.001G122600 Populus trichocarpa HOM05D009510 ORTHO05D010335 6.5e-10 68.2 181 33.1
DCAR_004946 Daucus carota HOM05D012984 ORTHO05D010335 8.5e-10 67.8 166 38.6
Dinv39126 Davidia involucrata HOM05D009510 ORTHO05D010335 4.2e-09 65.5 192 32.3
Manes.01G079300 Manihot esculenta HOM05D009510 ORTHO05D010335 6.1e-08 61.6 175 35.4
DCAR_027783 Daucus carota HOM05D009510 ORTHO05D010335 1.0e-07 60.8 164 32.3
ClCG10G002770 Citrullus lanatus HOM05D040458 ORTHO05D010335 3.0e-07 59.3 74 48.6
CsaV3_3G002810 Cucumis sativus L. HOM05D040458 ORTHO05D010335 6.7e-07 58.2 65 50.8
DCAR_006823 Daucus carota HOM05D009510 ORTHO05D010335 1.2e-06 57.4 167 31.1
GSVIVG01001306001 Vitis vinifera HOM05D009510 ORTHO05D010335 2.0e-06 56.6 95 46.3
CiPaw.12G108600 Carya illinoinensis HOM05D009510 ORTHO05D010335 2.6e-06 56.2 174 31.6
SGA_v2.0_scaffold120G32871 Striga asiatica HOM05D012984 ORTHO05D010335 2.6e-06 56.2 149 36.2
Duzib068G0669 Durio zibethinus HOM05D009510 ORTHO05D010335 4.4e-06 55.5 51 60.8
Lsat_1_v5_gn_6_91520 Lactuca sativa HOM05D012984 ORTHO05D010335 4.4e-06 55.5 152 34.2
CSS0028488 Camellia sinensis var. sinensis HOM05D009510 ORTHO05D010335 5.7e-06 55.1 111 34.2
PGR042G1660 Punica granatum HOM05D015618 ORTHO05D010335 5.7e-06 55.1 151 30.5
Dinv21618 Davidia involucrata HOM05D009510 ORTHO05D010335 9.7e-06 54.3 182 30.8


User provided reference genes

Program Settings